RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 DIAPH1O60610 1272 aaKnown RBP21.16■□□□□ 0.98
SKA2-209ENST00000583976 HSPA6P17066 643 aa21.16■□□□□ 0.98
SKA2-209ENST00000583976 CHRNA5P30532 468 aa21.16■□□□□ 0.98
SKA2-209ENST00000583976 USPL1Q5W0Q7 1092 aa21.16■□□□□ 0.98
SKA2-209ENST00000583976 CYP19A1P11511 503 aaPredicted RBP21.15■□□□□ 0.98
SKA2-209ENST00000583976 CARMIL3Q8ND23 1372 aa21.13■□□□□ 0.97
SKA2-209ENST00000583976 NMRK2Q9NPI5 230 aa21.13■□□□□ 0.97
SKA2-209ENST00000583976 TM4SF1P30408 202 aa21.11■□□□□ 0.97
SKA2-209ENST00000583976 NFIXQ14938 502 aa21.11■□□□□ 0.97
SKA2-209ENST00000583976 C9orf131Q5VYM1 1079 aa21.11■□□□□ 0.97
SKA2-209ENST00000583976 BCL2L12Q9HB09 334 aa21.11■□□□□ 0.97
SKA2-209ENST00000583976 PIM2Q9P1W9 311 aa21.11■□□□□ 0.97
SKA2-209ENST00000583976 COL11A2P13942 1736 aaPredicted RBP21.11■□□□□ 0.97
SKA2-209ENST00000583976 SBF1O95248 1867 aa21.1■□□□□ 0.97
SKA2-209ENST00000583976 ZPR1O75312 459 aa21.1■□□□□ 0.97
SKA2-209ENST00000583976 DALRD3Q5D0E6 543 aaKnown RBP21.1■□□□□ 0.97
SKA2-209ENST00000583976 NPC1L1Q9UHC9 1359 aa21.1■□□□□ 0.97
SKA2-209ENST00000583976 ANKRD31Q8N7Z5 1873 aa21.09■□□□□ 0.97
SKA2-209ENST00000583976 U2SURPO15042 1029 aaKnown RBP21.09■□□□□ 0.97
SKA2-209ENST00000583976 TIAM2Q8IVF5 1701 aa21.09■□□□□ 0.97
SKA2-209ENST00000583976 NARFQ9UHQ1 456 aa21.08■□□□□ 0.97
SKA2-209ENST00000583976 TNRC6CQ9HCJ0 1690 aaKnown RBP21.08■□□□□ 0.96
SKA2-209ENST00000583976 CANXP27824 592 aaKnown RBP21.07■□□□□ 0.96
SKA2-209ENST00000583976 RASSF7Q02833 373 aa21.07■□□□□ 0.96
SKA2-209ENST00000583976 WDR90Q96KV7 1748 aa21.07■□□□□ 0.96
SKA2-209ENST00000583976 BCORQ6W2J9 1755 aa21.06■□□□□ 0.96
SKA2-209ENST00000583976 RNF181Q9P0P0 153 aa21.06■□□□□ 0.96
SKA2-209ENST00000583976 VSIG10Q8N0Z9 540 aa21.05■□□□□ 0.96
SKA2-209ENST00000583976 IL17REQ8NFR9 667 aa21.05■□□□□ 0.96
SKA2-209ENST00000583976 ZNF496Q96IT1 587 aaPredicted RBP21.05■□□□□ 0.96
SKA2-209ENST00000583976 HEG1Q9ULI3 1381 aa21.05■□□□□ 0.96
SKA2-209ENST00000583976 TTC5Q8N0Z6 440 aa21.04■□□□□ 0.96
SKA2-209ENST00000583976 BICDL1Q6ZP65 573 aa21.03■□□□□ 0.96
SKA2-209ENST00000583976 CEMIPQ8WUJ3 1361 aa21.02■□□□□ 0.96
SKA2-209ENST00000583976 TOMM70O94826 608 aa21.02■□□□□ 0.96
SKA2-209ENST00000583976 SERPINB2P05120 415 aa21.02■□□□□ 0.96
SKA2-209ENST00000583976 EIF5P55010 431 aaKnown RBP21.02■□□□□ 0.96
SKA2-209ENST00000583976 TEFQ10587 303 aa21.02■□□□□ 0.96
SKA2-209ENST00000583976 GAS2L2Q8NHY3 880 aa21.02■□□□□ 0.96
SKA2-209ENST00000583976 ZNF330Q9Y3S2 320 aaPredicted RBP21.02■□□□□ 0.96
SKA2-209ENST00000583976 GNAT3A8MTJ3 354 aa21.01■□□□□ 0.95
SKA2-209ENST00000583976 PRELPP51888 382 aa21.01■□□□□ 0.95
SKA2-209ENST00000583976 ZNF790Q6PG37 636 aa21.01■□□□□ 0.95
SKA2-209ENST00000583976 CACNA1SQ13698 1873 aa21.01■□□□□ 0.95
SKA2-209ENST00000583976 KCNQ3O43525 872 aa21■□□□□ 0.95
SKA2-209ENST00000583976 PRKAR2BP31323 418 aa21■□□□□ 0.95
SKA2-209ENST00000583976 DDX10Q13206 875 aaKnown RBP21■□□□□ 0.95
SKA2-209ENST00000583976 TBC1D9BQ66K14 1250 aa21■□□□□ 0.95
SKA2-209ENST00000583976 PHACTR3Q96KR7 559 aa21■□□□□ 0.95
SKA2-209ENST00000583976 RSPH6AQ9H0K4 717 aa21■□□□□ 0.95
SKA2-209ENST00000583976 ZNF316A6NFI3 1004 aaPredicted RBP20.99■□□□□ 0.95
SKA2-209ENST00000583976 CCDC24Q8N4L8 307 aa20.99■□□□□ 0.95
SKA2-209ENST00000583976 CCDC88AQ3V6T2 1871 aa20.98■□□□□ 0.95
SKA2-209ENST00000583976 STARD3NLO95772 234 aa20.98■□□□□ 0.95
SKA2-209ENST00000583976 HTRA3P83110 453 aa20.98■□□□□ 0.95
SKA2-209ENST00000583976 C2CD5Q86YS7 1000 aa20.98■□□□□ 0.95
SKA2-209ENST00000583976 APLP1P51693 650 aa20.97■□□□□ 0.95
SKA2-209ENST00000583976 TBC1D2BQ9UPU7 963 aa20.97■□□□□ 0.95
SKA2-209ENST00000583976 A1BGP04217 495 aa20.96■□□□□ 0.95
SKA2-209ENST00000583976 PIP4K2AP48426 406 aaPredicted RBP20.96■□□□□ 0.95
SKA2-209ENST00000583976 KDM2BQ8NHM5 1336 aa20.96■□□□□ 0.95
SKA2-209ENST00000583976 PRAMEF22A3QJZ6 481 aa20.95■□□□□ 0.94
SKA2-209ENST00000583976 NFKBIEO00221 500 aa20.95■□□□□ 0.94
SKA2-209ENST00000583976 RBM46Q8TBY0 533 aaKnown RBP20.95■□□□□ 0.94
SKA2-209ENST00000583976 FMNL2Q96PY5 1086 aa20.95■□□□□ 0.94
SKA2-209ENST00000583976 IFFO2Q5TF58 517 aa20.94■□□□□ 0.94
SKA2-209ENST00000583976 PRR5LQ6MZQ0 368 aa20.94■□□□□ 0.94
SKA2-209ENST00000583976 C16orf71Q8IYS4 520 aaPredicted RBP20.94■□□□□ 0.94
SKA2-209ENST00000583976 TTLL6Q8N841 843 aa20.94■□□□□ 0.94
SKA2-209ENST00000583976 RRAGCQ9HB90 399 aa20.94■□□□□ 0.94
SKA2-209ENST00000583976 ARFGEF2Q9Y6D5 1785 aa20.94■□□□□ 0.94
SKA2-209ENST00000583976 LAMB4A4D0S4 1761 aa20.93■□□□□ 0.94
SKA2-209ENST00000583976 FER1L6Q2WGJ9 1857 aa20.93■□□□□ 0.94
SKA2-209ENST00000583976 A0A087WZG4 1122 aa20.93■□□□□ 0.94
SKA2-209ENST00000583976 IL6STP40189 918 aaPredicted RBP20.93■□□□□ 0.94
SKA2-209ENST00000583976 BTBD11A6QL63 1104 aa20.92■□□□□ 0.94
SKA2-209ENST00000583976 CAMTA2O94983 1202 aa20.92■□□□□ 0.94
SKA2-209ENST00000583976 PPP2R1AP30153 589 aa20.92■□□□□ 0.94
SKA2-209ENST00000583976 MCM10Q7L590 875 aa20.92■□□□□ 0.94
SKA2-209ENST00000583976 DNAJC5GQ8N7S2 189 aa20.92■□□□□ 0.94
SKA2-209ENST00000583976 CFAP53Q96M91 514 aa20.92■□□□□ 0.94
SKA2-209ENST00000583976 ZNF219Q9P2Y4 722 aaPredicted RBP20.92■□□□□ 0.94
SKA2-209ENST00000583976 H0YIN7 160 aa20.91■□□□□ 0.94
SKA2-209ENST00000583976 LMNB1P20700 586 aa20.91■□□□□ 0.94
SKA2-209ENST00000583976 SLX4Q8IY92 1834 aa20.9■□□□□ 0.94
SKA2-209ENST00000583976 PCNTO95613 3336 aa20.9■□□□□ 0.94
SKA2-209ENST00000583976 ZC3H4Q9UPT8 1303 aaKnown RBP20.9■□□□□ 0.94
SKA2-209ENST00000583976 U2AF1L5P0DN76 240 aaPredicted RBP20.9■□□□□ 0.94
SKA2-209ENST00000583976 U2AF1Q01081 240 aaKnown RBP eCLIP20.9■□□□□ 0.941e-7■□□□□ 9.5
SKA2-209ENST00000583976 DCTN1Q14203 1278 aa20.9■□□□□ 0.94
SKA2-209ENST00000583976 DLG5Q8TDM6 1919 aa20.89■□□□□ 0.93
SKA2-209ENST00000583976 DICER1Q9UPY3 1922 aaKnown RBP20.89■□□□□ 0.93
SKA2-209ENST00000583976 ZNF622Q969S3 477 aaKnown RBP eCLIP20.89■□□□□ 0.93
SKA2-209ENST00000583976 TEX13AQ9BXU3 409 aaPredicted RBP20.89■□□□□ 0.93
SKA2-209ENST00000583976 USP16Q9Y5T5 823 aa20.89■□□□□ 0.93
SKA2-209ENST00000583976 KDM3BQ7LBC6 1761 aa20.88■□□□□ 0.93
SKA2-209ENST00000583976 DZIP3Q86Y13 1208 aaKnown RBP20.88■□□□□ 0.93
SKA2-209ENST00000583976 CNBD1Q8NA66 436 aa20.88■□□□□ 0.93
SKA2-209ENST00000583976 C21orf2O43822 256 aa20.87■□□□□ 0.93
SKA2-209ENST00000583976 FSTL1Q12841 308 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms