RNA–Protein interactions for RNA: ENST00000583805.1

CRLF3-205, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-205ENST00000583805 KDM6AO15550 1401 aaPredicted RBP11.82□□□□□ -0.52
CRLF3-205ENST00000583805 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.81□□□□□ -0.52
CRLF3-205ENST00000583805 ATP6V1AP38606 617 aa11.81□□□□□ -0.52
CRLF3-205ENST00000583805 PDAP1Q13442 181 aaKnown RBP11.81□□□□□ -0.52
CRLF3-205ENST00000583805 MSL1Q68DK7 614 aa11.81□□□□□ -0.52
CRLF3-205ENST00000583805 NLGN2Q8NFZ4 835 aa11.81□□□□□ -0.52
CRLF3-205ENST00000583805 MRC1P22897 1456 aa11.81□□□□□ -0.52
CRLF3-205ENST00000583805 C1orf141Q5JVX7 400 aa11.8□□□□□ -0.52
CRLF3-205ENST00000583805 ZNF530Q6P9A1 599 aaPredicted RBP11.8□□□□□ -0.52
CRLF3-205ENST00000583805 PELP1Q8IZL8 1130 aaKnown RBP11.8□□□□□ -0.52
CRLF3-205ENST00000583805 LINC00116Q8NCU8 138 aa11.8□□□□□ -0.52
CRLF3-205ENST00000583805 ATG3Q9NT62 314 aa11.8□□□□□ -0.52
CRLF3-205ENST00000583805 ASAP1Q9ULH1 1129 aa11.8□□□□□ -0.52
CRLF3-205ENST00000583805 AFDNP55196 1824 aaKnown RBP11.79□□□□□ -0.52
CRLF3-205ENST00000583805 GNPATO15228 680 aa11.79□□□□□ -0.52
CRLF3-205ENST00000583805 PHF14O94880 888 aa11.79□□□□□ -0.52
CRLF3-205ENST00000583805 KCNV2Q8TDN2 545 aa11.79□□□□□ -0.52
CRLF3-205ENST00000583805 KIF7Q2M1P5 1343 aa11.79□□□□□ -0.52
CRLF3-205ENST00000583805 CNTNAP4Q9C0A0 1308 aa11.79□□□□□ -0.52
CRLF3-205ENST00000583805 DLEC1Q9Y238 1755 aa11.79□□□□□ -0.52
CRLF3-205ENST00000583805 ITPK1Q13572 414 aa11.78□□□□□ -0.52
CRLF3-205ENST00000583805 RC3H1Q5TC82 1133 aaKnown RBP11.78□□□□□ -0.52
CRLF3-205ENST00000583805 NPC1L1Q9UHC9 1359 aa11.78□□□□□ -0.52
CRLF3-205ENST00000583805 MTHFSP49914 203 aa11.77□□□□□ -0.53
CRLF3-205ENST00000583805 CABP4P57796 275 aa11.77□□□□□ -0.53
CRLF3-205ENST00000583805 RTCBQ9Y3I0 505 aaKnown RBP11.77□□□□□ -0.53
CRLF3-205ENST00000583805 SBF1O95248 1867 aa11.76□□□□□ -0.53
CRLF3-205ENST00000583805 YBX3P16989 372 aaKnown RBP eCLIP11.76□□□□□ -0.53
CRLF3-205ENST00000583805 IL13P35225 146 aa11.76□□□□□ -0.53
CRLF3-205ENST00000583805 SULT6B1Q6IMI4 303 aa11.76□□□□□ -0.53
CRLF3-205ENST00000583805 AMIGO3Q86WK7 504 aa11.76□□□□□ -0.53
CRLF3-205ENST00000583805 NRXN2Q9P2S2 1712 aa11.75□□□□□ -0.53
CRLF3-205ENST00000583805 CCDC88AQ3V6T2 1871 aa11.75□□□□□ -0.53
CRLF3-205ENST00000583805 AKAP4Q5JQC9 854 aa11.75□□□□□ -0.53
CRLF3-205ENST00000583805 TRAPPC3LQ5T215 181 aa11.75□□□□□ -0.53
CRLF3-205ENST00000583805 AEBP1Q8IUX7 1158 aa11.75□□□□□ -0.53
CRLF3-205ENST00000583805 NLGN1Q8N2Q7 840 aa11.75□□□□□ -0.53
CRLF3-205ENST00000583805 C10orf71Q711Q0 1435 aa11.75□□□□□ -0.53
CRLF3-205ENST00000583805 GIGYF1O75420 1035 aaPredicted RBP11.74□□□□□ -0.53
CRLF3-205ENST00000583805 ARHGEF1Q92888 912 aaKnown RBP11.74□□□□□ -0.53
CRLF3-205ENST00000583805 TSPYL2Q9H2G4 693 aaPredicted RBP11.74□□□□□ -0.53
CRLF3-205ENST00000583805 COL3A1P02461 1466 aaPredicted RBP11.74□□□□□ -0.53
CRLF3-205ENST00000583805 SCN7AQ01118 1682 aa11.74□□□□□ -0.53
CRLF3-205ENST00000583805 DLG5Q8TDM6 1919 aa11.74□□□□□ -0.53
CRLF3-205ENST00000583805 PXDNLA1KZ92 1463 aa11.73□□□□□ -0.53
CRLF3-205ENST00000583805 ADCY9O60503 1353 aa11.73□□□□□ -0.53
CRLF3-205ENST00000583805 RPS6KA4O75676 772 aa11.73□□□□□ -0.53
CRLF3-205ENST00000583805 KCPQ6ZWJ8 1503 aa11.73□□□□□ -0.53
CRLF3-205ENST00000583805 SLC4A9Q96Q91 983 aa11.73□□□□□ -0.53
CRLF3-205ENST00000583805 BCORQ6W2J9 1755 aa11.72□□□□□ -0.53
CRLF3-205ENST00000583805 ATP10DQ9P241 1426 aa11.72□□□□□ -0.53
CRLF3-205ENST00000583805 PER1O15534 1290 aaPredicted RBP11.72□□□□□ -0.53
CRLF3-205ENST00000583805 MMP10P09238 476 aa11.72□□□□□ -0.53
CRLF3-205ENST00000583805 RFC4P35249 363 aa11.72□□□□□ -0.53
CRLF3-205ENST00000583805 C1QTNF8P60827 252 aa11.72□□□□□ -0.53
CRLF3-205ENST00000583805 TGFB2P61812 414 aa11.72□□□□□ -0.53
CRLF3-205ENST00000583805 NFATC2IPQ8NCF5 419 aa11.72□□□□□ -0.53
CRLF3-205ENST00000583805 CACNA1SQ13698 1873 aa11.72□□□□□ -0.53
CRLF3-205ENST00000583805 DICER1Q9UPY3 1922 aaKnown RBP11.71□□□□□ -0.53
CRLF3-205ENST00000583805 DIAPH1O60610 1272 aaKnown RBP11.71□□□□□ -0.53
CRLF3-205ENST00000583805 SLC52A2Q9HAB3 445 aa11.71□□□□□ -0.53
CRLF3-205ENST00000583805 CCDC87Q9NVE4 849 aa11.71□□□□□ -0.53
CRLF3-205ENST00000583805 TNRC6CQ9HCJ0 1690 aaKnown RBP11.71□□□□□ -0.54
CRLF3-205ENST00000583805 LAMB4A4D0S4 1761 aa11.7□□□□□ -0.54
CRLF3-205ENST00000583805 CRKLP46109 303 aaKnown RBP11.7□□□□□ -0.54
CRLF3-205ENST00000583805 ARFGEF2Q9Y6D5 1785 aa11.69□□□□□ -0.54
CRLF3-205ENST00000583805 USP42Q9H9J4 1324 aaKnown RBP11.69□□□□□ -0.54
CRLF3-205ENST00000583805 PTCD1O75127 700 aaKnown RBP11.69□□□□□ -0.54
CRLF3-205ENST00000583805 GYS1P13807 737 aa11.69□□□□□ -0.54
CRLF3-205ENST00000583805 SMIM5Q71RC9 77 aa11.69□□□□□ -0.54
CRLF3-205ENST00000583805 PARP3Q9Y6F1 533 aa11.69□□□□□ -0.54
CRLF3-205ENST00000583805 ANKRD31Q8N7Z5 1873 aa11.68□□□□□ -0.54
CRLF3-205ENST00000583805 RNMTO43148 476 aaKnown RBP11.68□□□□□ -0.54
CRLF3-205ENST00000583805 HMOX1P09601 288 aa11.68□□□□□ -0.54
CRLF3-205ENST00000583805 PSEN1P49768 467 aa11.68□□□□□ -0.54
CRLF3-205ENST00000583805 E2F4Q16254 413 aa11.68□□□□□ -0.54
CRLF3-205ENST00000583805 CC2D1BQ5T0F9 858 aaKnown RBP11.68□□□□□ -0.54
CRLF3-205ENST00000583805 TIAM2Q8IVF5 1701 aa11.67□□□□□ -0.54
CRLF3-205ENST00000583805 SENP3-EIF4A1A0A087X0R7 540 aa11.67□□□□□ -0.54
CRLF3-205ENST00000583805 PITPNM1O00562 1244 aa11.67□□□□□ -0.54
CRLF3-205ENST00000583805 ZNF579Q8NAF0 562 aaKnown RBP11.67□□□□□ -0.54
CRLF3-205ENST00000583805 GAS2L2Q8NHY3 880 aa11.67□□□□□ -0.54
CRLF3-205ENST00000583805 GPBP1L1Q9HC44 474 aaPredicted RBP11.67□□□□□ -0.54
CRLF3-205ENST00000583805 MTHFSDQ2M296 383 aaKnown RBP11.66□□□□□ -0.54
CRLF3-205ENST00000583805 SMYD5Q6GMV2 418 aa11.66□□□□□ -0.54
CRLF3-205ENST00000583805 PCDHB8Q9UN66 801 aa11.66□□□□□ -0.54
CRLF3-205ENST00000583805 PCDHB13Q9Y5F0 798 aa11.66□□□□□ -0.54
CRLF3-205ENST00000583805 COL15A1P39059 1388 aa11.66□□□□□ -0.54
CRLF3-205ENST00000583805 SOS1Q07889 1333 aaPredicted RBP11.65□□□□□ -0.54
CRLF3-205ENST00000583805 ZPR1O75312 459 aa11.65□□□□□ -0.54
CRLF3-205ENST00000583805 CFAP53Q96M91 514 aa11.65□□□□□ -0.54
CRLF3-205ENST00000583805 MFRPQ9BY79 579 aa11.65□□□□□ -0.54
CRLF3-205ENST00000583805 LGR6Q9HBX8 967 aa11.65□□□□□ -0.54
CRLF3-205ENST00000583805 FER1L6Q2WGJ9 1857 aa11.65□□□□□ -0.54
CRLF3-205ENST00000583805 KDM3BQ7LBC6 1761 aa11.64□□□□□ -0.55
CRLF3-205ENST00000583805 COL11A2P13942 1736 aaPredicted RBP11.64□□□□□ -0.55
CRLF3-205ENST00000583805 INTS5Q6P9B9 1019 aaKnown RBP11.64□□□□□ -0.55
CRLF3-205ENST00000583805 DNAJC10Q8IXB1 793 aa11.64□□□□□ -0.55
CRLF3-205ENST00000583805 TTC5Q8N0Z6 440 aa11.64□□□□□ -0.55
CRLF3-205ENST00000583805 GNAT3A8MTJ3 354 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms