RNA–Protein interactions for RNA: ENST00000583463.5

SPECC1-220, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-220ENST00000583463 PARP3Q9Y6F1 533 aa20.57■□□□□ 0.88
SPECC1-220ENST00000583463 TNRC6CQ9HCJ0 1690 aaKnown RBP20.57■□□□□ 0.88
SPECC1-220ENST00000583463 PCNTO95613 3336 aa20.56■□□□□ 0.88
SPECC1-220ENST00000583463 RPS6KA4O75676 772 aa20.56■□□□□ 0.88
SPECC1-220ENST00000583463 RFC4P35249 363 aa20.56■□□□□ 0.88
SPECC1-220ENST00000583463 JMYQ8N9B5 988 aa20.56■□□□□ 0.88
SPECC1-220ENST00000583463 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.56■□□□□ 0.88
SPECC1-220ENST00000583463 RNF181Q9P0P0 153 aa20.56■□□□□ 0.88
SPECC1-220ENST00000583463 ADAMTS8Q9UP79 889 aa20.56■□□□□ 0.88
SPECC1-220ENST00000583463 PRELPP51888 382 aa20.55■□□□□ 0.88
SPECC1-220ENST00000583463 DCAF5Q96JK2 942 aa20.55■□□□□ 0.88
SPECC1-220ENST00000583463 CNTNAP4Q9C0A0 1308 aa20.54■□□□□ 0.88
SPECC1-220ENST00000583463 PTCD1O75127 700 aaKnown RBP20.54■□□□□ 0.88
SPECC1-220ENST00000583463 PRKAR2BP31323 418 aa20.54■□□□□ 0.88
SPECC1-220ENST00000583463 RASSF7Q02833 373 aa20.54■□□□□ 0.88
SPECC1-220ENST00000583463 FAM9BQ8IZU0 186 aa20.54■□□□□ 0.88
SPECC1-220ENST00000583463 PNNQ9H307 717 aaKnown RBP20.54■□□□□ 0.88
SPECC1-220ENST00000583463 RC3H1Q5TC82 1133 aaKnown RBP20.53■□□□□ 0.88
SPECC1-220ENST00000583463 VIRMAQ69YN4 1812 aaKnown RBP20.53■□□□□ 0.88
SPECC1-220ENST00000583463 C16orf71Q8IYS4 520 aaPredicted RBP20.52■□□□□ 0.88
SPECC1-220ENST00000583463 PIM2Q9P1W9 311 aa20.52■□□□□ 0.88
SPECC1-220ENST00000583463 CRKLP46109 303 aaKnown RBP20.51■□□□□ 0.87
SPECC1-220ENST00000583463 MAPK8IP3Q9UPT6 1336 aa20.51■□□□□ 0.87
SPECC1-220ENST00000583463 TIAM2Q8IVF5 1701 aa20.5■□□□□ 0.87
SPECC1-220ENST00000583463 NEFMP07197 916 aa20.5■□□□□ 0.87
SPECC1-220ENST00000583463 ADRA2BP18089 450 aa20.5■□□□□ 0.87
SPECC1-220ENST00000583463 DALRD3Q5D0E6 543 aaKnown RBP20.5■□□□□ 0.87
SPECC1-220ENST00000583463 PLEKHF1Q96S99 279 aa20.5■□□□□ 0.87
SPECC1-220ENST00000583463 SCN11AQ9UI33 1791 aa20.49■□□□□ 0.87
SPECC1-220ENST00000583463 ERVV-2B6SEH9 535 aa20.49■□□□□ 0.87
SPECC1-220ENST00000583463 FSTL1Q12841 308 aa20.49■□□□□ 0.87
SPECC1-220ENST00000583463 TNS4Q8IZW8 715 aa20.49■□□□□ 0.87
SPECC1-220ENST00000583463 RUNDC1Q96C34 613 aa20.49■□□□□ 0.87
SPECC1-220ENST00000583463 USP42Q9H9J4 1324 aaKnown RBP20.49■□□□□ 0.87
SPECC1-220ENST00000583463 CABP4P57796 275 aa20.48■□□□□ 0.87
SPECC1-220ENST00000583463 AMOTQ4VCS5 1084 aa20.48■□□□□ 0.87
SPECC1-220ENST00000583463 ZNF530Q6P9A1 599 aaPredicted RBP20.48■□□□□ 0.87
SPECC1-220ENST00000583463 CCDC146Q8IYE0 955 aa20.48■□□□□ 0.87
SPECC1-220ENST00000583463 DLEC1Q9Y238 1755 aa20.48■□□□□ 0.87
SPECC1-220ENST00000583463 POLRMTO00411 1230 aaKnown RBP20.47■□□□□ 0.87
SPECC1-220ENST00000583463 PLEKHO1Q53GL0 409 aaPredicted RBP20.47■□□□□ 0.87
SPECC1-220ENST00000583463 INTS5Q6P9B9 1019 aaKnown RBP20.47■□□□□ 0.87
SPECC1-220ENST00000583463 NFATC2IPQ8NCF5 419 aa20.46■□□□□ 0.87
SPECC1-220ENST00000583463 PHACTR3Q96KR7 559 aa20.46■□□□□ 0.87
SPECC1-220ENST00000583463 KDM2BQ8NHM5 1336 aa20.46■□□□□ 0.87
SPECC1-220ENST00000583463 NRXN2Q9P2S2 1712 aa20.45■□□□□ 0.86
SPECC1-220ENST00000583463 TM4SF1P30408 202 aa20.45■□□□□ 0.86
SPECC1-220ENST00000583463 USPL1Q5W0Q7 1092 aa20.44■□□□□ 0.86
SPECC1-220ENST00000583463 GAS2L2Q8NHY3 880 aa20.44■□□□□ 0.86
SPECC1-220ENST00000583463 HSPA1AP0DMV8 641 aaKnown RBP20.43■□□□□ 0.86
SPECC1-220ENST00000583463 HSPA1BP0DMV9 641 aaKnown RBP20.43■□□□□ 0.86
SPECC1-220ENST00000583463 MTHFSDQ2M296 383 aaKnown RBP20.43■□□□□ 0.86
SPECC1-220ENST00000583463 DNAJC10Q8IXB1 793 aa20.43■□□□□ 0.86
SPECC1-220ENST00000583463 ANKRD31Q8N7Z5 1873 aa20.43■□□□□ 0.86
SPECC1-220ENST00000583463 CARMIL3Q8ND23 1372 aa20.42■□□□□ 0.86
SPECC1-220ENST00000583463 CACNA1SQ13698 1873 aa20.41■□□□□ 0.86
SPECC1-220ENST00000583463 POTECB2RU33 542 aa20.41■□□□□ 0.86
SPECC1-220ENST00000583463 NFE2L2Q16236 605 aa20.41■□□□□ 0.86
SPECC1-220ENST00000583463 SMC1BQ8NDV3 1235 aa20.41■□□□□ 0.86
SPECC1-220ENST00000583463 DLG5Q8TDM6 1919 aa20.41■□□□□ 0.86
SPECC1-220ENST00000583463 NFIXQ14938 502 aa20.4■□□□□ 0.86
SPECC1-220ENST00000583463 C1orf141Q5JVX7 400 aa20.4■□□□□ 0.86
SPECC1-220ENST00000583463 BCL2L12Q9HB09 334 aa20.4■□□□□ 0.86
SPECC1-220ENST00000583463 APAF1O14727 1248 aa20.39■□□□□ 0.85
SPECC1-220ENST00000583463 HSP90AB1P08238 724 aaKnown RBP20.39■□□□□ 0.85
SPECC1-220ENST00000583463 TMPOP42166 694 aaKnown RBP20.39■□□□□ 0.85
SPECC1-220ENST00000583463 COL11A2P13942 1736 aaPredicted RBP20.39■□□□□ 0.85
SPECC1-220ENST00000583463 DICER1Q9UPY3 1922 aaKnown RBP20.38■□□□□ 0.85
SPECC1-220ENST00000583463 SLC39A6Q13433 755 aa20.38■□□□□ 0.85
SPECC1-220ENST00000583463 AKAP4Q5JQC9 854 aa20.38■□□□□ 0.85
SPECC1-220ENST00000583463 SOS1Q07889 1333 aaPredicted RBP20.37■□□□□ 0.85
SPECC1-220ENST00000583463 NFKBIEO00221 500 aa20.37■□□□□ 0.85
SPECC1-220ENST00000583463 LGR6Q9HBX8 967 aa20.37■□□□□ 0.85
SPECC1-220ENST00000583463 GLTPD2A6NH11 291 aa20.36■□□□□ 0.85
SPECC1-220ENST00000583463 GNAT3A8MTJ3 354 aa20.36■□□□□ 0.85
SPECC1-220ENST00000583463 CCDC24Q8N4L8 307 aa20.36■□□□□ 0.85
SPECC1-220ENST00000583463 RRP7AQ9Y3A4 280 aaKnown RBP20.36■□□□□ 0.85
SPECC1-220ENST00000583463 FER1L6Q2WGJ9 1857 aa20.35■□□□□ 0.85
SPECC1-220ENST00000583463 RIPK4P57078 832 aa20.35■□□□□ 0.85
SPECC1-220ENST00000583463 LMOD3Q0VAK6 560 aa20.35■□□□□ 0.85
SPECC1-220ENST00000583463 ZNF219Q9P2Y4 722 aaPredicted RBP20.35■□□□□ 0.85
SPECC1-220ENST00000583463 ZBTB1Q9Y2K1 713 aa20.35■□□□□ 0.85
SPECC1-220ENST00000583463 POTEIP0CG38 1075 aa20.34■□□□□ 0.85
SPECC1-220ENST00000583463 POTEJP0CG39 1038 aa20.34■□□□□ 0.85
SPECC1-220ENST00000583463 CYP19A1P11511 503 aaPredicted RBP20.34■□□□□ 0.85
SPECC1-220ENST00000583463 VEGFAP15692 232 aaPredicted RBP20.34■□□□□ 0.85
SPECC1-220ENST00000583463 LMNB1P20700 586 aa20.34■□□□□ 0.85
SPECC1-220ENST00000583463 NCBP3Q53F19 620 aaKnown RBP20.34■□□□□ 0.85
SPECC1-220ENST00000583463 NGEFQ8N5V2 710 aa20.34■□□□□ 0.85
SPECC1-220ENST00000583463 HTATSF1O43719 755 aaKnown RBP20.33■□□□□ 0.85
SPECC1-220ENST00000583463 ZPR1O75312 459 aa20.33■□□□□ 0.85
SPECC1-220ENST00000583463 SERPINB2P05120 415 aa20.33■□□□□ 0.85
SPECC1-220ENST00000583463 NEUROD2Q15784 382 aa20.33■□□□□ 0.85
SPECC1-220ENST00000583463 RTF1Q92541 710 aaKnown RBP20.33■□□□□ 0.85
SPECC1-220ENST00000583463 MRC1P22897 1456 aa20.32■□□□□ 0.84
SPECC1-220ENST00000583463 BICDL1Q6ZP65 573 aa20.32■□□□□ 0.84
SPECC1-220ENST00000583463 C2CD5Q86YS7 1000 aa20.32■□□□□ 0.84
SPECC1-220ENST00000583463 COL15A1P39059 1388 aa20.32■□□□□ 0.84
SPECC1-220ENST00000583463 CCDC27Q2M243 656 aa20.31■□□□□ 0.84
SPECC1-220ENST00000583463 MKRN1Q9UHC7 482 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms