RNA–Protein interactions for RNA: ENST00000582648.5

ERBB2-211, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-211ENST00000582648 SRP68Q9UHB9 627 aaKnown RBP23.76■■□□□ 1.39
ERBB2-211ENST00000582648 TMPOP42166 694 aaKnown RBP23.75■■□□□ 1.39
ERBB2-211ENST00000582648 TAF7Q15545 349 aaPredicted RBP23.75■■□□□ 1.39
ERBB2-211ENST00000582648 NEUROD2Q15784 382 aa23.75■■□□□ 1.39
ERBB2-211ENST00000582648 RUNDC1Q96C34 613 aa23.75■■□□□ 1.39
ERBB2-211ENST00000582648 SOS1Q07889 1333 aaPredicted RBP23.75■■□□□ 1.39
ERBB2-211ENST00000582648 STARD3NLO95772 234 aa23.74■■□□□ 1.39
ERBB2-211ENST00000582648 CANXP27824 592 aaKnown RBP23.74■■□□□ 1.39
ERBB2-211ENST00000582648 COL15A1P39059 1388 aa23.74■■□□□ 1.39
ERBB2-211ENST00000582648 PRAMEF22A3QJZ6 481 aa23.73■■□□□ 1.39
ERBB2-211ENST00000582648 GYS1P13807 737 aa23.72■■□□□ 1.39
ERBB2-211ENST00000582648 ZNF330Q9Y3S2 320 aaPredicted RBP23.72■■□□□ 1.39
ERBB2-211ENST00000582648 USP42Q9H9J4 1324 aaKnown RBP23.72■■□□□ 1.39
ERBB2-211ENST00000582648 LAMB4A4D0S4 1761 aa23.72■■□□□ 1.39
ERBB2-211ENST00000582648 MMP10P09238 476 aa23.71■■□□□ 1.39
ERBB2-211ENST00000582648 NLGN2Q8NFZ4 835 aa23.71■■□□□ 1.39
ERBB2-211ENST00000582648 LMOD3Q0VAK6 560 aa23.7■■□□□ 1.38
ERBB2-211ENST00000582648 TEX13AQ9BXU3 409 aaPredicted RBP23.7■■□□□ 1.38
ERBB2-211ENST00000582648 A1BGP04217 495 aa23.68■■□□□ 1.38
ERBB2-211ENST00000582648 PIP4K2AP48426 406 aaPredicted RBP23.68■■□□□ 1.38
ERBB2-211ENST00000582648 NLGN1Q8N2Q7 840 aa23.68■■□□□ 1.38
ERBB2-211ENST00000582648 PNISRQ8TF01 805 aaKnown RBP23.68■■□□□ 1.38
ERBB2-211ENST00000582648 MRS2Q9HD23 443 aa23.68■■□□□ 1.38
ERBB2-211ENST00000582648 USP16Q9Y5T5 823 aa23.68■■□□□ 1.38
ERBB2-211ENST00000582648 SCN7AQ01118 1682 aa23.67■■□□□ 1.38
ERBB2-211ENST00000582648 ZPR1O75312 459 aa23.67■■□□□ 1.38
ERBB2-211ENST00000582648 SNRPA1P09661 255 aaKnown RBP23.67■■□□□ 1.38
ERBB2-211ENST00000582648 FKBP8Q14318 412 aa23.67■■□□□ 1.38
ERBB2-211ENST00000582648 USPL1Q5W0Q7 1092 aa23.67■■□□□ 1.38
ERBB2-211ENST00000582648 DCAF8L1A6NGE4 600 aa23.66■■□□□ 1.38
ERBB2-211ENST00000582648 TSPYL4Q9UJ04 414 aa23.66■■□□□ 1.38
ERBB2-211ENST00000582648 PELP1Q8IZL8 1130 aaKnown RBP23.65■■□□□ 1.38
ERBB2-211ENST00000582648 EIF5P55010 431 aaKnown RBP23.64■■□□□ 1.37
ERBB2-211ENST00000582648 TRIM35Q9UPQ4 493 aa23.64■■□□□ 1.37
ERBB2-211ENST00000582648 SENP3-EIF4A1A0A087X0R7 540 aa23.63■■□□□ 1.37
ERBB2-211ENST00000582648 APAF1O14727 1248 aa23.63■■□□□ 1.37
ERBB2-211ENST00000582648 NARFQ9UHQ1 456 aa23.63■■□□□ 1.37
ERBB2-211ENST00000582648 PARP3Q9Y6F1 533 aa23.63■■□□□ 1.37
ERBB2-211ENST00000582648 BCORQ6W2J9 1755 aa23.63■■□□□ 1.37
ERBB2-211ENST00000582648 KIF13BQ9NQT8 1826 aa23.62■■□□□ 1.37
ERBB2-211ENST00000582648 EIF4A1P60842 406 aaKnown RBP23.62■■□□□ 1.37
ERBB2-211ENST00000582648 LAS1LQ9Y4W2 734 aaKnown RBP23.62■■□□□ 1.37
ERBB2-211ENST00000582648 CD2APQ9Y5K6 639 aa23.62■■□□□ 1.37
ERBB2-211ENST00000582648 IL6STP40189 918 aaPredicted RBP23.61■■□□□ 1.37
ERBB2-211ENST00000582648 DDR1Q08345 913 aa23.61■■□□□ 1.37
ERBB2-211ENST00000582648 NPM2Q86SE8 214 aaKnown RBP23.61■■□□□ 1.37
ERBB2-211ENST00000582648 C10orf71Q711Q0 1435 aa23.6■■□□□ 1.37
ERBB2-211ENST00000582648 A0A087WZG4 1122 aa23.6■■□□□ 1.37
ERBB2-211ENST00000582648 BCL2L12Q9HB09 334 aa23.6■■□□□ 1.37
ERBB2-211ENST00000582648 WWC3Q9ULE0 1092 aa23.6■■□□□ 1.37
ERBB2-211ENST00000582648 TBC1D2BQ9UPU7 963 aa23.6■■□□□ 1.37
ERBB2-211ENST00000582648 N4BP2Q86UW6 1770 aaPredicted RBP23.6■■□□□ 1.37
ERBB2-211ENST00000582648 GIGYF1O75420 1035 aaPredicted RBP23.59■■□□□ 1.37
ERBB2-211ENST00000582648 GPR162Q16538 588 aa23.59■■□□□ 1.37
ERBB2-211ENST00000582648 AFDNP55196 1824 aaKnown RBP23.59■■□□□ 1.37
ERBB2-211ENST00000582648 KIAA1551Q9HCM1 1747 aa23.59■■□□□ 1.37
ERBB2-211ENST00000582648 NBPF26B4DH59 902 aa23.57■■□□□ 1.36
ERBB2-211ENST00000582648 NBPF10Q6P3W6 841 aaKnown RBP23.57■■□□□ 1.36
ERBB2-211ENST00000582648 BICDL1Q6ZP65 573 aa23.57■■□□□ 1.36
ERBB2-211ENST00000582648 NBPF15Q8N660 670 aa23.57■■□□□ 1.36
ERBB2-211ENST00000582648 POLRMTO00411 1230 aaKnown RBP23.56■■□□□ 1.36
ERBB2-211ENST00000582648 NFIXQ14938 502 aa23.56■■□□□ 1.36
ERBB2-211ENST00000582648 DZIP3Q86Y13 1208 aaKnown RBP23.56■■□□□ 1.36
ERBB2-211ENST00000582648 UTRNP46939 3433 aa23.55■■□□□ 1.36
ERBB2-211ENST00000582648 PXDNLA1KZ92 1463 aa23.55■■□□□ 1.36
ERBB2-211ENST00000582648 CAMTA2O94983 1202 aa23.54■■□□□ 1.36
ERBB2-211ENST00000582648 TM4SF1P30408 202 aa23.54■■□□□ 1.36
ERBB2-211ENST00000582648 BABAM1Q9NWV8 329 aa23.54■■□□□ 1.36
ERBB2-211ENST00000582648 NRXN2Q9P2S2 1712 aa23.53■■□□□ 1.36
ERBB2-211ENST00000582648 YBX3P16989 372 aaKnown RBP eCLIP23.53■■□□□ 1.36
ERBB2-211ENST00000582648 KRT24Q2M2I5 525 aa23.53■■□□□ 1.36
ERBB2-211ENST00000582648 TBC1D9BQ66K14 1250 aa23.53■■□□□ 1.36
ERBB2-211ENST00000582648 NGEFQ8N5V2 710 aa23.53■■□□□ 1.36
ERBB2-211ENST00000582648 GOLGB1Q14789 3259 aaKnown RBP23.53■■□□□ 1.36
ERBB2-211ENST00000582648 CHL1O00533 1208 aa23.52■■□□□ 1.36
ERBB2-211ENST00000582648 MYL6BP14649 208 aa23.51■■□□□ 1.35
ERBB2-211ENST00000582648 EIF2S2P20042 333 aaKnown RBP23.51■■□□□ 1.35
ERBB2-211ENST00000582648 FAM9BQ8IZU0 186 aa23.5■■□□□ 1.35
ERBB2-211ENST00000582648 NECTIN2Q92692 538 aa23.5■■□□□ 1.35
ERBB2-211ENST00000582648 CHD4Q14839 1912 aa23.49■■□□□ 1.35
ERBB2-211ENST00000582648 A0A0G2JLW4 131 aa23.49■■□□□ 1.35
ERBB2-211ENST00000582648 SERPINB2P05120 415 aa23.49■■□□□ 1.35
ERBB2-211ENST00000582648 BRCA1P38398 1863 aaKnown RBP23.48■■□□□ 1.35
ERBB2-211ENST00000582648 CFAP44Q96MT7 982 aa23.48■■□□□ 1.35
ERBB2-211ENST00000582648 MBIPQ9NS73 344 aa23.48■■□□□ 1.35
ERBB2-211ENST00000582648 CARMIL3Q8ND23 1372 aa23.48■■□□□ 1.35
ERBB2-211ENST00000582648 DPEP1P16444 411 aa23.47■■□□□ 1.35
ERBB2-211ENST00000582648 TGFB2P61812 414 aa23.47■■□□□ 1.35
ERBB2-211ENST00000582648 ANXA1P04083 346 aa23.46■■□□□ 1.35
ERBB2-211ENST00000582648 YY1P25490 414 aa23.46■■□□□ 1.35
ERBB2-211ENST00000582648 CALD1Q05682 793 aaKnown RBP23.46■■□□□ 1.35
ERBB2-211ENST00000582648 IFT57Q9NWB7 429 aa23.46■■□□□ 1.35
ERBB2-211ENST00000582648 ZNF652Q9Y2D9 606 aa23.46■■□□□ 1.35
ERBB2-211ENST00000582648 SALL2Q9Y467 1007 aaPredicted RBP23.45■■□□□ 1.34
ERBB2-211ENST00000582648 ANKRD31Q8N7Z5 1873 aa23.45■■□□□ 1.34
ERBB2-211ENST00000582648 NUP98P52948 1817 aa23.45■■□□□ 1.34
ERBB2-211ENST00000582648 ERBB4Q15303 1308 aa23.44■■□□□ 1.34
ERBB2-211ENST00000582648 ZNF853P0CG23 659 aa23.44■■□□□ 1.34
ERBB2-211ENST00000582648 CHRNA5P30532 468 aa23.44■■□□□ 1.34
ERBB2-211ENST00000582648 GNAI1P63096 354 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms