RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 THUMPD2Q9BTF0 503 aaKnown RBP16.62■□□□□ 0.25
SNORD55-201ENST00000581525 CHL1O00533 1208 aa16.61■□□□□ 0.25
SNORD55-201ENST00000581525 APAF1O14727 1248 aa16.61■□□□□ 0.25
SNORD55-201ENST00000581525 MSH5O43196 834 aa16.61■□□□□ 0.25
SNORD55-201ENST00000581525 GYS1P13807 737 aa16.61■□□□□ 0.25
SNORD55-201ENST00000581525 POLD1P28340 1107 aa16.61■□□□□ 0.25
SNORD55-201ENST00000581525 NLGN1Q8N2Q7 840 aa16.61■□□□□ 0.25
SNORD55-201ENST00000581525 MRS2Q9HD23 443 aa16.61■□□□□ 0.25
SNORD55-201ENST00000581525 MIS18AQ9NYP9 233 aa16.61■□□□□ 0.25
SNORD55-201ENST00000581525 ZBTB1Q9Y2K1 713 aa16.61■□□□□ 0.25
SNORD55-201ENST00000581525 USP16Q9Y5T5 823 aa16.61■□□□□ 0.25
SNORD55-201ENST00000581525 GIGYF1O75420 1035 aaPredicted RBP16.6■□□□□ 0.25
SNORD55-201ENST00000581525 SYT17Q9BSW7 474 aa16.6■□□□□ 0.25
SNORD55-201ENST00000581525 PPP1R1BQ9UD71 204 aaPredicted RBP16.6■□□□□ 0.25
SNORD55-201ENST00000581525 RFC4P35249 363 aa16.59■□□□□ 0.25
SNORD55-201ENST00000581525 IL6STP40189 918 aaPredicted RBP16.59■□□□□ 0.25
SNORD55-201ENST00000581525 RRP7AQ9Y3A4 280 aaKnown RBP16.59■□□□□ 0.25
SNORD55-201ENST00000581525 USP42Q9H9J4 1324 aaKnown RBP16.59■□□□□ 0.25
SNORD55-201ENST00000581525 ZNF853P0CG23 659 aa16.58■□□□□ 0.24
SNORD55-201ENST00000581525 CCDC27Q2M243 656 aa16.58■□□□□ 0.24
SNORD55-201ENST00000581525 FHDC1Q9C0D6 1143 aaPredicted RBP16.58■□□□□ 0.24
SNORD55-201ENST00000581525 NARFQ9UHQ1 456 aa16.58■□□□□ 0.24
SNORD55-201ENST00000581525 KDM3BQ7LBC6 1761 aa16.58■□□□□ 0.24
SNORD55-201ENST00000581525 PRAMEF22A3QJZ6 481 aa16.57■□□□□ 0.24
SNORD55-201ENST00000581525 A1BGP04217 495 aa16.57■□□□□ 0.24
SNORD55-201ENST00000581525 TM4SF1P30408 202 aa16.57■□□□□ 0.24
SNORD55-201ENST00000581525 NEUROD2Q15784 382 aa16.57■□□□□ 0.24
SNORD55-201ENST00000581525 MSL1Q68DK7 614 aa16.56■□□□□ 0.24
SNORD55-201ENST00000581525 CFAP44Q96MT7 982 aa16.56■□□□□ 0.24
SNORD55-201ENST00000581525 COL15A1P39059 1388 aa16.55■□□□□ 0.24
SNORD55-201ENST00000581525 A0A087WZG4 1122 aa16.55■□□□□ 0.24
SNORD55-201ENST00000581525 RGL2O15211 777 aa16.55■□□□□ 0.24
SNORD55-201ENST00000581525 BCL2L12Q9HB09 334 aa16.55■□□□□ 0.24
SNORD55-201ENST00000581525 TSPYL4Q9UJ04 414 aa16.55■□□□□ 0.24
SNORD55-201ENST00000581525 CD2APQ9Y5K6 639 aa16.55■□□□□ 0.24
SNORD55-201ENST00000581525 NBPF26B4DH59 902 aa16.54■□□□□ 0.24
SNORD55-201ENST00000581525 CANXP27824 592 aaKnown RBP16.54■□□□□ 0.24
SNORD55-201ENST00000581525 NBPF10Q6P3W6 841 aaKnown RBP16.54■□□□□ 0.24
SNORD55-201ENST00000581525 NBPF15Q8N660 670 aa16.54■□□□□ 0.24
SNORD55-201ENST00000581525 SRP68Q9UHB9 627 aaKnown RBP16.54■□□□□ 0.24
SNORD55-201ENST00000581525 C4AP0C0L4 1744 aa16.53■□□□□ 0.24
SNORD55-201ENST00000581525 ZPR1O75312 459 aa16.53■□□□□ 0.24
SNORD55-201ENST00000581525 CALD1Q05682 793 aaKnown RBP16.53■□□□□ 0.24
SNORD55-201ENST00000581525 FKBP8Q14318 412 aa16.53■□□□□ 0.24
SNORD55-201ENST00000581525 ERBB4Q15303 1308 aa16.52■□□□□ 0.24
SNORD55-201ENST00000581525 MMP10P09238 476 aa16.52■□□□□ 0.24
SNORD55-201ENST00000581525 USPL1Q5W0Q7 1092 aa16.52■□□□□ 0.24
SNORD55-201ENST00000581525 NGEFQ8N5V2 710 aa16.52■□□□□ 0.24
SNORD55-201ENST00000581525 IFT57Q9NWB7 429 aa16.52■□□□□ 0.24
SNORD55-201ENST00000581525 CCER2I3L3R5 266 aa16.51■□□□□ 0.23
SNORD55-201ENST00000581525 HOXB7P09629 217 aa16.51■□□□□ 0.23
SNORD55-201ENST00000581525 WWC1Q8IX03 1113 aa16.51■□□□□ 0.23
SNORD55-201ENST00000581525 CAMTA2O94983 1202 aa16.5■□□□□ 0.23
SNORD55-201ENST00000581525 GNAI1P63096 354 aa16.5■□□□□ 0.23
SNORD55-201ENST00000581525 CLEC4GQ6UXB4 293 aa16.5■□□□□ 0.23
SNORD55-201ENST00000581525 LRP10Q7Z4F1 713 aa16.5■□□□□ 0.23
SNORD55-201ENST00000581525 IL16Q14005 1332 aa16.49■□□□□ 0.23
SNORD55-201ENST00000581525 POLRMTO00411 1230 aaKnown RBP16.49■□□□□ 0.23
SNORD55-201ENST00000581525 PDIA6Q15084 440 aa16.49■□□□□ 0.23
SNORD55-201ENST00000581525 DDR1Q08345 913 aa16.48■□□□□ 0.23
SNORD55-201ENST00000581525 MBIPQ9NS73 344 aa16.48■□□□□ 0.23
SNORD55-201ENST00000581525 TBC1D2BQ9UPU7 963 aa16.48■□□□□ 0.23
SNORD55-201ENST00000581525 PARP3Q9Y6F1 533 aa16.48■□□□□ 0.23
SNORD55-201ENST00000581525 GOLGB1Q14789 3259 aaKnown RBP16.48■□□□□ 0.23
SNORD55-201ENST00000581525 UTRNP46939 3433 aa16.47■□□□□ 0.23
SNORD55-201ENST00000581525 TGFB2P61812 414 aa16.47■□□□□ 0.23
SNORD55-201ENST00000581525 NFIXQ14938 502 aa16.47■□□□□ 0.23
SNORD55-201ENST00000581525 DZIP3Q86Y13 1208 aaKnown RBP16.47■□□□□ 0.23
SNORD55-201ENST00000581525 WDR63Q8IWG1 891 aa16.47■□□□□ 0.23
SNORD55-201ENST00000581525 NLGN2Q8NFZ4 835 aa16.47■□□□□ 0.23
SNORD55-201ENST00000581525 ERVV-1B6SEH8 477 aa16.46■□□□□ 0.23
SNORD55-201ENST00000581525 LAMB4A4D0S4 1761 aa16.46■□□□□ 0.22
SNORD55-201ENST00000581525 C10orf71Q711Q0 1435 aa16.45■□□□□ 0.22
SNORD55-201ENST00000581525 PIP4K2AP48426 406 aaPredicted RBP16.45■□□□□ 0.22
SNORD55-201ENST00000581525 FAM9BQ8IZU0 186 aa16.45■□□□□ 0.22
SNORD55-201ENST00000581525 KRT24Q2M2I5 525 aa16.44■□□□□ 0.22
SNORD55-201ENST00000581525 TBC1D9BQ66K14 1250 aa16.44■□□□□ 0.22
SNORD55-201ENST00000581525 NPM2Q86SE8 214 aaKnown RBP16.44■□□□□ 0.22
SNORD55-201ENST00000581525 LAS1LQ9Y4W2 734 aaKnown RBP16.44■□□□□ 0.22
SNORD55-201ENST00000581525 KIF13BQ9NQT8 1826 aa16.44■□□□□ 0.22
SNORD55-201ENST00000581525 NRXN2Q9P2S2 1712 aa16.43■□□□□ 0.22
SNORD55-201ENST00000581525 SERPINB2P05120 415 aa16.43■□□□□ 0.22
SNORD55-201ENST00000581525 DDX21Q9NR30 783 aaKnown RBP eCLIP16.43■□□□□ 0.22
SNORD55-201ENST00000581525 ZNF521Q96K83 1311 aa16.43■□□□□ 0.22
SNORD55-201ENST00000581525 KCNA3P22001 575 aa16.42■□□□□ 0.22
SNORD55-201ENST00000581525 DUSP27Q5VZP5 1158 aa16.42■□□□□ 0.22
SNORD55-201ENST00000581525 DIEXFQ68CQ4 756 aaKnown RBP16.42■□□□□ 0.22
SNORD55-201ENST00000581525 SCN7AQ01118 1682 aa16.42■□□□□ 0.22
SNORD55-201ENST00000581525 EIF2S2P20042 333 aaKnown RBP16.41■□□□□ 0.22
SNORD55-201ENST00000581525 TTLL7Q6ZT98 887 aa16.41■□□□□ 0.22
SNORD55-201ENST00000581525 C8orf58Q8NAV2 365 aa16.41■□□□□ 0.22
SNORD55-201ENST00000581525 CHMP4AQ9BY43 222 aa16.41■□□□□ 0.22
SNORD55-201ENST00000581525 MAP3K15Q6ZN16 1313 aa16.41■□□□□ 0.22
SNORD55-201ENST00000581525 DCAF8L1A6NGE4 600 aa16.4■□□□□ 0.22
SNORD55-201ENST00000581525 HLFQ16534 295 aa16.4■□□□□ 0.22
SNORD55-201ENST00000581525 PROSER3Q2NL68 480 aa16.4■□□□□ 0.22
SNORD55-201ENST00000581525 SETDB2Q96T68 719 aa16.4■□□□□ 0.22
SNORD55-201ENST00000581525 ZNF652Q9Y2D9 606 aa16.4■□□□□ 0.22
SNORD55-201ENST00000581525 ZNF330Q9Y3S2 320 aaPredicted RBP16.4■□□□□ 0.22
SNORD55-201ENST00000581525 BCORQ6W2J9 1755 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms