RNA–Protein interactions for RNA: ENST00000581497.1

SRSF1-203, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-203ENST00000581497 AXIN1O15169 862 aa11.28□□□□□ -0.6
SRSF1-203ENST00000581497 NGDNQ8NEJ9 315 aaKnown RBP11.28□□□□□ -0.6
SRSF1-203ENST00000581497 CABLES1Q8TDN4 633 aa11.28□□□□□ -0.6
SRSF1-203ENST00000581497 SLC27A5Q9Y2P5 690 aa11.28□□□□□ -0.6
SRSF1-203ENST00000581497 ATAD2Q6PL18 1390 aa11.28□□□□□ -0.6
SRSF1-203ENST00000581497 SLIT2O94813 1529 aa11.27□□□□□ -0.61
SRSF1-203ENST00000581497 TULP4Q9NRJ4 1543 aa11.27□□□□□ -0.61
SRSF1-203ENST00000581497 GNPATO15228 680 aa11.27□□□□□ -0.61
SRSF1-203ENST00000581497 FECHP22830 423 aa11.27□□□□□ -0.61
SRSF1-203ENST00000581497 CTC1Q2NKJ3 1217 aa11.27□□□□□ -0.61
SRSF1-203ENST00000581497 RBM26Q5T8P6 1007 aaKnown RBP11.27□□□□□ -0.61
SRSF1-203ENST00000581497 NUDT16Q96DE0 195 aaKnown RBP11.26□□□□□ -0.61
SRSF1-203ENST00000581497 PRDM9Q9NQV7 894 aa11.26□□□□□ -0.61
SRSF1-203ENST00000581497 GMPR2Q9P2T1 348 aaKnown RBP11.26□□□□□ -0.61
SRSF1-203ENST00000581497 NBPF1Q3BBV0 1214 aa11.25□□□□□ -0.61
SRSF1-203ENST00000581497 CDK19Q9BWU1 502 aa11.25□□□□□ -0.61
SRSF1-203ENST00000581497 SALL2Q9Y467 1007 aaPredicted RBP11.25□□□□□ -0.61
SRSF1-203ENST00000581497 USP32Q8NFA0 1604 aa11.24□□□□□ -0.61
SRSF1-203ENST00000581497 C11orf95C9JLR9 678 aaPredicted RBP11.24□□□□□ -0.61
SRSF1-203ENST00000581497 GCGRP47871 477 aa11.24□□□□□ -0.61
SRSF1-203ENST00000581497 SMCPP49901 116 aaPredicted RBP11.24□□□□□ -0.61
SRSF1-203ENST00000581497 VPS72Q15906 364 aa11.24□□□□□ -0.61
SRSF1-203ENST00000581497 NLRP7Q8WX94 980 aa11.24□□□□□ -0.61
SRSF1-203ENST00000581497 TESPA1A2RU30 521 aaPredicted RBP11.23□□□□□ -0.61
SRSF1-203ENST00000581497 FAM83GA6ND36 823 aa11.23□□□□□ -0.61
SRSF1-203ENST00000581497 ZBTB24O43167 697 aaPredicted RBP11.23□□□□□ -0.61
SRSF1-203ENST00000581497 WFS1O76024 890 aa11.23□□□□□ -0.61
SRSF1-203ENST00000581497 SULF1Q8IWU6 871 aa11.23□□□□□ -0.61
SRSF1-203ENST00000581497 L3MBTL2Q969R5 705 aa11.23□□□□□ -0.61
SRSF1-203ENST00000581497 CCDC9Q9Y3X0 531 aaKnown RBP11.23□□□□□ -0.61
SRSF1-203ENST00000581497 ATP7BP35670 1465 aa11.23□□□□□ -0.61
SRSF1-203ENST00000581497 RALGAPBQ86X10 1494 aa11.23□□□□□ -0.61
SRSF1-203ENST00000581497 TTC24A2A3L6 582 aaPredicted RBP11.22□□□□□ -0.61
SRSF1-203ENST00000581497 RGPD8O14715 1765 aaPredicted RBP11.22□□□□□ -0.61
SRSF1-203ENST00000581497 GPR37O15354 613 aa11.22□□□□□ -0.61
SRSF1-203ENST00000581497 SMYD5Q6GMV2 418 aa11.22□□□□□ -0.61
SRSF1-203ENST00000581497 BRICD5Q6PL45 260 aa11.22□□□□□ -0.61
SRSF1-203ENST00000581497 CCDC125Q86Z20 511 aa11.22□□□□□ -0.61
SRSF1-203ENST00000581497 CENPJQ9HC77 1338 aaPredicted RBP11.22□□□□□ -0.61
SRSF1-203ENST00000581497 MARF1Q9Y4F3 1742 aaKnown RBP11.21□□□□□ -0.61
SRSF1-203ENST00000581497 PLEKHG3A1L390 1219 aa11.21□□□□□ -0.61
SRSF1-203ENST00000581497 MSS51Q4VC12 460 aa11.21□□□□□ -0.61
SRSF1-203ENST00000581497 SIN3AQ96ST3 1273 aa11.21□□□□□ -0.61
SRSF1-203ENST00000581497 ARHGEF28Q8N1W1 1705 aaKnown RBP11.21□□□□□ -0.62
SRSF1-203ENST00000581497 KIAA1210Q9ULL0 1709 aa11.21□□□□□ -0.62
SRSF1-203ENST00000581497 POLR3AO14802 1390 aaPredicted RBP11.2□□□□□ -0.62
SRSF1-203ENST00000581497 ACEP12821 1306 aa11.2□□□□□ -0.62
SRSF1-203ENST00000581497 SRPK2P78362 688 aaKnown RBP11.2□□□□□ -0.62
SRSF1-203ENST00000581497 NEUROD1Q13562 356 aa11.2□□□□□ -0.62
SRSF1-203ENST00000581497 NBPF8Q3BBV2 869 aa11.2□□□□□ -0.62
SRSF1-203ENST00000581497 SEPT12Q8IYM1 358 aa11.2□□□□□ -0.62
SRSF1-203ENST00000581497 BTG4Q9NY30 223 aa11.2□□□□□ -0.62
SRSF1-203ENST00000581497 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.2□□□□□ -0.62
SRSF1-203ENST00000581497 RNF19BQ6ZMZ0 732 aa11.19□□□□□ -0.62
SRSF1-203ENST00000581497 PRDM11Q9NQV5 511 aa11.19□□□□□ -0.62
SRSF1-203ENST00000581497 TRPM3Q9HCF6 1732 aaPredicted RBP11.18□□□□□ -0.62
SRSF1-203ENST00000581497 PHOX2BQ99453 314 aa11.18□□□□□ -0.62
SRSF1-203ENST00000581497 GLI3P10071 1580 aa11.18□□□□□ -0.62
SRSF1-203ENST00000581497 WNT7AO00755 349 aa11.17□□□□□ -0.62
SRSF1-203ENST00000581497 GRIPAP1Q4V328 841 aa11.17□□□□□ -0.62
SRSF1-203ENST00000581497 ALS2Q96Q42 1657 aa11.17□□□□□ -0.62
SRSF1-203ENST00000581497 ROCK2O75116 1388 aaKnown RBP11.16□□□□□ -0.62
SRSF1-203ENST00000581497 EVC2Q86UK5 1308 aa11.16□□□□□ -0.62
SRSF1-203ENST00000581497 NFX1Q12986 1120 aaKnown RBP11.16□□□□□ -0.62
SRSF1-203ENST00000581497 NUTM2GQ5VZR2 741 aa11.16□□□□□ -0.62
SRSF1-203ENST00000581497 KRT27Q7Z3Y8 459 aa11.16□□□□□ -0.62
SRSF1-203ENST00000581497 ABTB2Q8N961 1025 aa11.16□□□□□ -0.62
SRSF1-203ENST00000581497 SNIP1Q8TAD8 396 aaKnown RBP11.16□□□□□ -0.62
SRSF1-203ENST00000581497 PPIP5K1Q6PFW1 1433 aa11.16□□□□□ -0.62
SRSF1-203ENST00000581497 BRD4O60885 1362 aaPredicted RBP11.16□□□□□ -0.62
SRSF1-203ENST00000581497 ITSN1Q15811 1721 aa11.15□□□□□ -0.62
SRSF1-203ENST00000581497 ABCA3Q99758 1704 aa11.15□□□□□ -0.62
SRSF1-203ENST00000581497 NWD2Q9ULI1 1742 aa11.15□□□□□ -0.62
SRSF1-203ENST00000581497 SMPD1P17405 629 aa11.15□□□□□ -0.62
SRSF1-203ENST00000581497 ZC3H6P61129 1189 aaKnown RBP11.15□□□□□ -0.62
SRSF1-203ENST00000581497 SF3B2Q13435 895 aaKnown RBP11.15□□□□□ -0.62
SRSF1-203ENST00000581497 NLRP13Q86W25 1043 aa11.15□□□□□ -0.62
SRSF1-203ENST00000581497 BLMP54132 1417 aaPredicted RBP11.15□□□□□ -0.62
SRSF1-203ENST00000581497 KIAA0232Q92628 1395 aa11.15□□□□□ -0.63
SRSF1-203ENST00000581497 PLCH1Q4KWH8 1693 aa11.14□□□□□ -0.63
SRSF1-203ENST00000581497 SPATA31A5Q5VU36 1347 aa11.14□□□□□ -0.63
SRSF1-203ENST00000581497 SPATA31A7Q8IWB4 1347 aa11.14□□□□□ -0.63
SRSF1-203ENST00000581497 TRIM32Q13049 653 aa11.14□□□□□ -0.63
SRSF1-203ENST00000581497 CHRNA2Q15822 529 aa11.14□□□□□ -0.63
SRSF1-203ENST00000581497 CABP1Q9NZU7 370 aa11.14□□□□□ -0.63
SRSF1-203ENST00000581497 COL14A1Q05707 1796 aaKnown RBP11.13□□□□□ -0.63
SRSF1-203ENST00000581497 Q3C1V9 767 aa11.13□□□□□ -0.63
SRSF1-203ENST00000581497 ATP13A2Q9NQ11 1180 aa11.13□□□□□ -0.63
SRSF1-203ENST00000581497 USP19O94966 1318 aa11.12□□□□□ -0.63
SRSF1-203ENST00000581497 TOPAZ1Q8N9V7 1692 aa11.12□□□□□ -0.63
SRSF1-203ENST00000581497 MMP16P51512 607 aa11.12□□□□□ -0.63
SRSF1-203ENST00000581497 EVA1CP58658 441 aa11.12□□□□□ -0.63
SRSF1-203ENST00000581497 STRN4Q9NRL3 753 aa11.12□□□□□ -0.63
SRSF1-203ENST00000581497 WIPF1O43516 503 aa11.11□□□□□ -0.63
SRSF1-203ENST00000581497 GCP02774 474 aa11.11□□□□□ -0.63
SRSF1-203ENST00000581497 MRGPRX2Q96LB1 330 aa11.11□□□□□ -0.63
SRSF1-203ENST00000581497 STK17AQ9UEE5 414 aa11.11□□□□□ -0.63
SRSF1-203ENST00000581497 CPDO75976 1380 aa11.11□□□□□ -0.63
SRSF1-203ENST00000581497 SPATA31A1Q5TZJ5 1347 aa11.1□□□□□ -0.63
SRSF1-203ENST00000581497 USP6P35125 1406 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms