RNA–Protein interactions for RNA: ENST00000581339.1

RIOK3-206, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 888 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-206ENST00000581339 ZFP42Q96MM3 310 aa10.71□□□□□ -0.69
RIOK3-206ENST00000581339 INSM2Q96T92 566 aaPredicted RBP10.71□□□□□ -0.69
RIOK3-206ENST00000581339 RAB6BQ9NRW1 208 aa10.71□□□□□ -0.69
RIOK3-206ENST00000581339 MEN1O00255 615 aa10.7□□□□□ -0.7
RIOK3-206ENST00000581339 LARGE2Q8N3Y3 721 aa10.7□□□□□ -0.7
RIOK3-206ENST00000581339 ZNF594Q96JF6 807 aaPredicted RBP10.7□□□□□ -0.7
RIOK3-206ENST00000581339 SENP2Q9HC62 589 aa10.7□□□□□ -0.7
RIOK3-206ENST00000581339 SCNN1DP51172 638 aa10.69□□□□□ -0.7
RIOK3-206ENST00000581339 GDF10P55107 478 aa10.69□□□□□ -0.7
RIOK3-206ENST00000581339 CDCA8Q53HL2 280 aa10.69□□□□□ -0.7
RIOK3-206ENST00000581339 TPCN2Q8NHX9 752 aa10.69□□□□□ -0.7
RIOK3-206ENST00000581339 NLRP3Q96P20 1036 aa10.69□□□□□ -0.7
RIOK3-206ENST00000581339 ETNK1Q9HBU6 452 aa10.69□□□□□ -0.7
RIOK3-206ENST00000581339 POLMQ9NP87 494 aaPredicted RBP10.69□□□□□ -0.7
RIOK3-206ENST00000581339 GMPR2Q9P2T1 348 aaKnown RBP10.69□□□□□ -0.7
RIOK3-206ENST00000581339 KIAA1024Q9UPX6 916 aa10.69□□□□□ -0.7
RIOK3-206ENST00000581339 NEO1Q92859 1461 aa10.68□□□□□ -0.7
RIOK3-206ENST00000581339 EEA1Q15075 1411 aa10.68□□□□□ -0.7
RIOK3-206ENST00000581339 FAM196BA6NMK8 535 aa10.68□□□□□ -0.7
RIOK3-206ENST00000581339 STAU1O95793 577 aaKnown RBP10.68□□□□□ -0.7
RIOK3-206ENST00000581339 IL2RAP01589 272 aa10.68□□□□□ -0.7
RIOK3-206ENST00000581339 SRPK2P78362 688 aaKnown RBP10.68□□□□□ -0.7
RIOK3-206ENST00000581339 CRTC2Q53ET0 693 aaPredicted RBP10.68□□□□□ -0.7
RIOK3-206ENST00000581339 CCDC102BQ68D86 513 aa10.68□□□□□ -0.7
RIOK3-206ENST00000581339 CNKSR1Q969H4 720 aa10.68□□□□□ -0.7
RIOK3-206ENST00000581339 KIFC2Q96AC6 838 aa10.68□□□□□ -0.7
RIOK3-206ENST00000581339 RBM19Q9Y4C8 960 aaKnown RBP10.68□□□□□ -0.7
RIOK3-206ENST00000581339 ADAMTSL3P82987 1691 aa10.67□□□□□ -0.7
RIOK3-206ENST00000581339 USP17L15C9J2P7 530 aa10.67□□□□□ -0.7
RIOK3-206ENST00000581339 USP17L10C9JJH3 530 aa10.67□□□□□ -0.7
RIOK3-206ENST00000581339 USP17L13C9JLJ4 530 aa10.67□□□□□ -0.7
RIOK3-206ENST00000581339 USP17L12C9JPN9 530 aa10.67□□□□□ -0.7
RIOK3-206ENST00000581339 USP17L11C9JVI0 530 aa10.67□□□□□ -0.7
RIOK3-206ENST00000581339 USP17L21D6R901 530 aa10.67□□□□□ -0.7
RIOK3-206ENST00000581339 USP17L18D6R9N7 530 aa10.67□□□□□ -0.7
RIOK3-206ENST00000581339 USP17L22D6RA61 530 aa10.67□□□□□ -0.7
RIOK3-206ENST00000581339 USP17L17D6RBQ6 530 aa10.67□□□□□ -0.7
RIOK3-206ENST00000581339 USP17L19D6RCP7 530 aa10.67□□□□□ -0.7
RIOK3-206ENST00000581339 USP17L20D6RJB6 530 aa10.67□□□□□ -0.7
RIOK3-206ENST00000581339 WASLO00401 505 aaPredicted RBP10.67□□□□□ -0.7
RIOK3-206ENST00000581339 ZBTB7BO15156 539 aaPredicted RBP10.67□□□□□ -0.7
RIOK3-206ENST00000581339 INHAP05111 366 aa10.67□□□□□ -0.7
RIOK3-206ENST00000581339 CTSOP43234 321 aaPredicted RBP10.67□□□□□ -0.7
RIOK3-206ENST00000581339 USP17L24Q0WX57 530 aa10.67□□□□□ -0.7
RIOK3-206ENST00000581339 SIX5Q8N196 739 aa10.67□□□□□ -0.7
RIOK3-206ENST00000581339 XAGE2Q96GT9 111 aa10.67□□□□□ -0.7
RIOK3-206ENST00000581339 TRIM47Q96LD4 638 aa10.67□□□□□ -0.7
RIOK3-206ENST00000581339 ESYT1Q9BSJ8 1104 aa10.67□□□□□ -0.7
RIOK3-206ENST00000581339 PHLDB1Q86UU1 1377 aa10.66□□□□□ -0.7
RIOK3-206ENST00000581339 TTLL8A6PVC2 850 aa10.66□□□□□ -0.7
RIOK3-206ENST00000581339 PTK7Q13308 1070 aa10.66□□□□□ -0.7
RIOK3-206ENST00000581339 SOS2Q07890 1332 aaPredicted RBP10.65□□□□□ -0.7
RIOK3-206ENST00000581339 CDK13Q14004 1512 aaKnown RBP10.65□□□□□ -0.7
RIOK3-206ENST00000581339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.65□□□□□ -0.7
RIOK3-206ENST00000581339 PLEKHD1A6NEE1 506 aa10.65□□□□□ -0.7
RIOK3-206ENST00000581339 TMEM229AB2RXF0 380 aa10.65□□□□□ -0.7
RIOK3-206ENST00000581339 PPP1R15AO75807 674 aaPredicted RBP10.65□□□□□ -0.7
RIOK3-206ENST00000581339 PTPRMP28827 1452 aa10.65□□□□□ -0.7
RIOK3-206ENST00000581339 TTC37Q6PGP7 1564 aa10.65□□□□□ -0.71
RIOK3-206ENST00000581339 GPC1P35052 558 aa10.64□□□□□ -0.71
RIOK3-206ENST00000581339 RNF144AP50876 292 aaPredicted RBP10.64□□□□□ -0.71
RIOK3-206ENST00000581339 ANKMY2Q8IV38 441 aa10.64□□□□□ -0.71
RIOK3-206ENST00000581339 ZNF358Q9NW07 568 aa10.64□□□□□ -0.71
RIOK3-206ENST00000581339 AKNAQ7Z591 1439 aa10.64□□□□□ -0.71
RIOK3-206ENST00000581339 C11orf95C9JLR9 678 aaPredicted RBP10.63□□□□□ -0.71
RIOK3-206ENST00000581339 BACH1O14867 736 aa10.63□□□□□ -0.71
RIOK3-206ENST00000581339 ATG7O95352 703 aa10.63□□□□□ -0.71
RIOK3-206ENST00000581339 FOXD4L5Q5VV16 416 aaPredicted RBP10.63□□□□□ -0.71
RIOK3-206ENST00000581339 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.63□□□□□ -0.71
RIOK3-206ENST00000581339 SERTAD1Q9UHV2 236 aa10.63□□□□□ -0.71
RIOK3-206ENST00000581339 HRH3Q9Y5N1 445 aa10.63□□□□□ -0.71
RIOK3-206ENST00000581339 BCORL1Q5H9F3 1711 aa10.63□□□□□ -0.71
RIOK3-206ENST00000581339 RICTORQ6R327 1708 aa10.63□□□□□ -0.71
RIOK3-206ENST00000581339 SIGLEC1Q9BZZ2 1709 aa10.63□□□□□ -0.71
RIOK3-206ENST00000581339 EFCAB5A4FU69 1503 aa10.63□□□□□ -0.71
RIOK3-206ENST00000581339 MADDQ8WXG6 1647 aa10.62□□□□□ -0.71
RIOK3-206ENST00000581339 FANCAO15360 1455 aa10.62□□□□□ -0.71
RIOK3-206ENST00000581339 DENND4BO75064 1496 aaPredicted RBP10.62□□□□□ -0.71
RIOK3-206ENST00000581339 ARID4BQ4LE39 1312 aaPredicted RBP10.62□□□□□ -0.71
RIOK3-206ENST00000581339 MAN1A2O60476 641 aa10.62□□□□□ -0.71
RIOK3-206ENST00000581339 DKK1O94907 266 aa10.62□□□□□ -0.71
RIOK3-206ENST00000581339 CENPCQ03188 943 aa10.62□□□□□ -0.71
RIOK3-206ENST00000581339 DPYDQ12882 1025 aa10.62□□□□□ -0.71
RIOK3-206ENST00000581339 TLR1Q15399 786 aa10.62□□□□□ -0.71
RIOK3-206ENST00000581339 SLC27A3Q5K4L6 730 aa10.62□□□□□ -0.71
RIOK3-206ENST00000581339 RNF217Q8TC41 542 aa10.62□□□□□ -0.71
RIOK3-206ENST00000581339 NOVA2Q9UNW9 492 aaKnown RBP10.62□□□□□ -0.71
RIOK3-206ENST00000581339 YEATS2Q9ULM3 1422 aa10.61□□□□□ -0.71
RIOK3-206ENST00000581339 SFI1A8K8P3 1242 aa10.61□□□□□ -0.71
RIOK3-206ENST00000581339 SNRPBP14678 240 aaKnown RBP10.61□□□□□ -0.71
RIOK3-206ENST00000581339 SEC13P55735 322 aa10.61□□□□□ -0.71
RIOK3-206ENST00000581339 ELOAQ14241 798 aaKnown RBP10.61□□□□□ -0.71
RIOK3-206ENST00000581339 SLC4A9Q96Q91 983 aa10.61□□□□□ -0.71
RIOK3-206ENST00000581339 ARHGEF40Q8TER5 1519 aa10.61□□□□□ -0.71
RIOK3-206ENST00000581339 FIGNL2A6NMB9 653 aa10.6□□□□□ -0.71
RIOK3-206ENST00000581339 POTECB2RU33 542 aa10.6□□□□□ -0.71
RIOK3-206ENST00000581339 SMTNP53814 917 aa10.6□□□□□ -0.71
RIOK3-206ENST00000581339 FAM200AQ8TCP9 573 aa10.6□□□□□ -0.71
RIOK3-206ENST00000581339 ARXQ96QS3 562 aa10.6□□□□□ -0.71
RIOK3-206ENST00000581339 FHDC1Q9C0D6 1143 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms