RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 RFC4P35249 363 aa24.6■■□□□ 1.53
PPP4R1-215ENST00000580182 SYT17Q9BSW7 474 aa24.6■■□□□ 1.53
PPP4R1-215ENST00000580182 C4AP0C0L4 1744 aa24.6■■□□□ 1.53
PPP4R1-215ENST00000580182 KLHL34Q8N239 644 aa24.59■■□□□ 1.53
PPP4R1-215ENST00000580182 SOS1Q07889 1333 aaPredicted RBP24.59■■□□□ 1.53
PPP4R1-215ENST00000580182 CANXP27824 592 aaKnown RBP24.58■■□□□ 1.53
PPP4R1-215ENST00000580182 SRP68Q9UHB9 627 aaKnown RBP24.58■■□□□ 1.53
PPP4R1-215ENST00000580182 STARD3NLO95772 234 aa24.57■■□□□ 1.52
PPP4R1-215ENST00000580182 TRIM35Q9UPQ4 493 aa24.57■■□□□ 1.52
PPP4R1-215ENST00000580182 USP16Q9Y5T5 823 aa24.57■■□□□ 1.52
PPP4R1-215ENST00000580182 GYS1P13807 737 aa24.56■■□□□ 1.52
PPP4R1-215ENST00000580182 TEX13AQ9BXU3 409 aaPredicted RBP24.56■■□□□ 1.52
PPP4R1-215ENST00000580182 MRS2Q9HD23 443 aa24.56■■□□□ 1.52
PPP4R1-215ENST00000580182 KDM3BQ7LBC6 1761 aa24.55■■□□□ 1.52
PPP4R1-215ENST00000580182 A1BGP04217 495 aa24.55■■□□□ 1.52
PPP4R1-215ENST00000580182 LMOD3Q0VAK6 560 aa24.55■■□□□ 1.52
PPP4R1-215ENST00000580182 PNISRQ8TF01 805 aaKnown RBP24.55■■□□□ 1.52
PPP4R1-215ENST00000580182 SNRPA1P09661 255 aaKnown RBP24.54■■□□□ 1.52
PPP4R1-215ENST00000580182 USP42Q9H9J4 1324 aaKnown RBP24.54■■□□□ 1.52
PPP4R1-215ENST00000580182 COL15A1P39059 1388 aa24.54■■□□□ 1.52
PPP4R1-215ENST00000580182 APAF1O14727 1248 aa24.53■■□□□ 1.52
PPP4R1-215ENST00000580182 MMP10P09238 476 aa24.52■■□□□ 1.52
PPP4R1-215ENST00000580182 PIP4K2AP48426 406 aaPredicted RBP24.52■■□□□ 1.52
PPP4R1-215ENST00000580182 EIF4A1P60842 406 aaKnown RBP24.52■■□□□ 1.52
PPP4R1-215ENST00000580182 NLGN1Q8N2Q7 840 aa24.52■■□□□ 1.52
PPP4R1-215ENST00000580182 SENP3-EIF4A1A0A087X0R7 540 aa24.51■■□□□ 1.51
PPP4R1-215ENST00000580182 EIF5P55010 431 aaKnown RBP24.51■■□□□ 1.51
PPP4R1-215ENST00000580182 FKBP8Q14318 412 aa24.51■■□□□ 1.51
PPP4R1-215ENST00000580182 USPL1Q5W0Q7 1092 aa24.51■■□□□ 1.51
PPP4R1-215ENST00000580182 NLGN2Q8NFZ4 835 aa24.51■■□□□ 1.51
PPP4R1-215ENST00000580182 TSPYL4Q9UJ04 414 aa24.51■■□□□ 1.51
PPP4R1-215ENST00000580182 ZNF330Q9Y3S2 320 aaPredicted RBP24.5■■□□□ 1.51
PPP4R1-215ENST00000580182 ZPR1O75312 459 aa24.49■■□□□ 1.51
PPP4R1-215ENST00000580182 NARFQ9UHQ1 456 aa24.49■■□□□ 1.51
PPP4R1-215ENST00000580182 GIGYF1O75420 1035 aaPredicted RBP24.47■■□□□ 1.51
PPP4R1-215ENST00000580182 IL6STP40189 918 aaPredicted RBP24.47■■□□□ 1.51
PPP4R1-215ENST00000580182 BCL2L12Q9HB09 334 aa24.47■■□□□ 1.51
PPP4R1-215ENST00000580182 LAS1LQ9Y4W2 734 aaKnown RBP24.47■■□□□ 1.51
PPP4R1-215ENST00000580182 NBPF26B4DH59 902 aa24.45■■□□□ 1.5
PPP4R1-215ENST00000580182 NBPF10Q6P3W6 841 aaKnown RBP24.45■■□□□ 1.5
PPP4R1-215ENST00000580182 NBPF15Q8N660 670 aa24.45■■□□□ 1.5
PPP4R1-215ENST00000580182 TBC1D2BQ9UPU7 963 aa24.45■■□□□ 1.5
PPP4R1-215ENST00000580182 DDR1Q08345 913 aa24.44■■□□□ 1.5
PPP4R1-215ENST00000580182 BABAM1Q9NWV8 329 aa24.44■■□□□ 1.5
PPP4R1-215ENST00000580182 CD2APQ9Y5K6 639 aa24.44■■□□□ 1.5
PPP4R1-215ENST00000580182 LAMB4A4D0S4 1761 aa24.44■■□□□ 1.5
PPP4R1-215ENST00000580182 A0A087WZG4 1122 aa24.43■■□□□ 1.5
PPP4R1-215ENST00000580182 CHL1O00533 1208 aa24.43■■□□□ 1.5
PPP4R1-215ENST00000580182 PARP3Q9Y6F1 533 aa24.43■■□□□ 1.5
PPP4R1-215ENST00000580182 TM4SF1P30408 202 aa24.42■■□□□ 1.5
PPP4R1-215ENST00000580182 POLRMTO00411 1230 aaKnown RBP24.4■■□□□ 1.5
PPP4R1-215ENST00000580182 NFIXQ14938 502 aa24.4■■□□□ 1.5
PPP4R1-215ENST00000580182 KRT24Q2M2I5 525 aa24.4■■□□□ 1.5
PPP4R1-215ENST00000580182 FAM9BQ8IZU0 186 aa24.4■■□□□ 1.5
PPP4R1-215ENST00000580182 DCAF8L1A6NGE4 600 aa24.39■■□□□ 1.49
PPP4R1-215ENST00000580182 CAMTA2O94983 1202 aa24.39■■□□□ 1.49
PPP4R1-215ENST00000580182 NPM2Q86SE8 214 aaKnown RBP24.39■■□□□ 1.49
PPP4R1-215ENST00000580182 DZIP3Q86Y13 1208 aaKnown RBP24.39■■□□□ 1.49
PPP4R1-215ENST00000580182 SCN7AQ01118 1682 aa24.38■■□□□ 1.49
PPP4R1-215ENST00000580182 PELP1Q8IZL8 1130 aaKnown RBP24.38■■□□□ 1.49
PPP4R1-215ENST00000580182 CFAP44Q96MT7 982 aa24.38■■□□□ 1.49
PPP4R1-215ENST00000580182 TBC1D9BQ66K14 1250 aa24.37■■□□□ 1.49
PPP4R1-215ENST00000580182 BICDL1Q6ZP65 573 aa24.37■■□□□ 1.49
PPP4R1-215ENST00000580182 NGEFQ8N5V2 710 aa24.37■■□□□ 1.49
PPP4R1-215ENST00000580182 C10orf71Q711Q0 1435 aa24.36■■□□□ 1.49
PPP4R1-215ENST00000580182 ZNF853P0CG23 659 aa24.36■■□□□ 1.49
PPP4R1-215ENST00000580182 EIF2S2P20042 333 aaKnown RBP24.36■■□□□ 1.49
PPP4R1-215ENST00000580182 MBIPQ9NS73 344 aa24.36■■□□□ 1.49
PPP4R1-215ENST00000580182 WWC3Q9ULE0 1092 aa24.36■■□□□ 1.49
PPP4R1-215ENST00000580182 KIF13BQ9NQT8 1826 aa24.35■■□□□ 1.49
PPP4R1-215ENST00000580182 MYL6BP14649 208 aa24.35■■□□□ 1.49
PPP4R1-215ENST00000580182 GPR162Q16538 588 aa24.35■■□□□ 1.49
PPP4R1-215ENST00000580182 BCORQ6W2J9 1755 aa24.34■■□□□ 1.49
PPP4R1-215ENST00000580182 NECTIN2Q92692 538 aa24.34■■□□□ 1.49
PPP4R1-215ENST00000580182 UTRNP46939 3433 aa24.33■■□□□ 1.49
PPP4R1-215ENST00000580182 YBX3P16989 372 aaKnown RBP eCLIP24.33■■□□□ 1.49
PPP4R1-215ENST00000580182 IFT57Q9NWB7 429 aa24.33■■□□□ 1.49
PPP4R1-215ENST00000580182 SALL2Q9Y467 1007 aaPredicted RBP24.33■■□□□ 1.49
PPP4R1-215ENST00000580182 GOLGB1Q14789 3259 aaKnown RBP24.33■■□□□ 1.49
PPP4R1-215ENST00000580182 AFDNP55196 1824 aaKnown RBP24.33■■□□□ 1.48
PPP4R1-215ENST00000580182 KIAA1551Q9HCM1 1747 aa24.32■■□□□ 1.48
PPP4R1-215ENST00000580182 SERPINB2P05120 415 aa24.32■■□□□ 1.48
PPP4R1-215ENST00000580182 GNAI1P63096 354 aa24.32■■□□□ 1.48
PPP4R1-215ENST00000580182 PDIA6Q15084 440 aa24.32■■□□□ 1.48
PPP4R1-215ENST00000580182 WWC1Q8IX03 1113 aa24.32■■□□□ 1.48
PPP4R1-215ENST00000580182 PXDNLA1KZ92 1463 aa24.32■■□□□ 1.48
PPP4R1-215ENST00000580182 A0A0G2JLW4 131 aa24.31■■□□□ 1.48
PPP4R1-215ENST00000580182 ANXA1P04083 346 aa24.31■■□□□ 1.48
PPP4R1-215ENST00000580182 CALD1Q05682 793 aaKnown RBP24.31■■□□□ 1.48
PPP4R1-215ENST00000580182 CCDC27Q2M243 656 aa24.31■■□□□ 1.48
PPP4R1-215ENST00000580182 PROSER3Q2NL68 480 aa24.31■■□□□ 1.48
PPP4R1-215ENST00000580182 N4BP2Q86UW6 1770 aaPredicted RBP24.31■■□□□ 1.48
PPP4R1-215ENST00000580182 TGFB2P61812 414 aa24.3■■□□□ 1.48
PPP4R1-215ENST00000580182 HLFQ16534 295 aa24.3■■□□□ 1.48
PPP4R1-215ENST00000580182 TTLL7Q6ZT98 887 aa24.3■■□□□ 1.48
PPP4R1-215ENST00000580182 NRXN2Q9P2S2 1712 aa24.3■■□□□ 1.48
PPP4R1-215ENST00000580182 DPEP1P16444 411 aa24.29■■□□□ 1.48
PPP4R1-215ENST00000580182 LRP10Q7Z4F1 713 aa24.29■■□□□ 1.48
PPP4R1-215ENST00000580182 ERBB4Q15303 1308 aa24.29■■□□□ 1.48
PPP4R1-215ENST00000580182 DUSP27Q5VZP5 1158 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms