RNA–Protein interactions for RNA: ENST00000580074.1

ERBB2-210, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-210ENST00000580074 YBX3P16989 372 aaKnown RBP eCLIP15.49■□□□□ 0.07
ERBB2-210ENST00000580074 DDX10Q13206 875 aaKnown RBP15.49■□□□□ 0.07
ERBB2-210ENST00000580074 IL17REQ8NFR9 667 aa15.49■□□□□ 0.07
ERBB2-210ENST00000580074 PHACTR3Q96KR7 559 aa15.49■□□□□ 0.07
ERBB2-210ENST00000580074 PXDNLA1KZ92 1463 aa15.48■□□□□ 0.07
ERBB2-210ENST00000580074 NARFQ9UHQ1 456 aa15.48■□□□□ 0.07
ERBB2-210ENST00000580074 SRP68Q9UHB9 627 aaKnown RBP15.47■□□□□ 0.07
ERBB2-210ENST00000580074 ZBTB1Q9Y2K1 713 aa15.47■□□□□ 0.07
ERBB2-210ENST00000580074 MYBBP1AQ9BQG0 1328 aaKnown RBP15.46■□□□□ 0.07
ERBB2-210ENST00000580074 CANXP27824 592 aaKnown RBP15.46■□□□□ 0.07
ERBB2-210ENST00000580074 USPL1Q5W0Q7 1092 aa15.46■□□□□ 0.07
ERBB2-210ENST00000580074 PNISRQ8TF01 805 aaKnown RBP15.46■□□□□ 0.07
ERBB2-210ENST00000580074 ZNF496Q96IT1 587 aaPredicted RBP15.46■□□□□ 0.07
ERBB2-210ENST00000580074 SCN7AQ01118 1682 aa15.46■□□□□ 0.07
ERBB2-210ENST00000580074 FKBP8Q14318 412 aa15.45■□□□□ 0.06
ERBB2-210ENST00000580074 N4BP2Q86UW6 1770 aaPredicted RBP15.44■□□□□ 0.06
ERBB2-210ENST00000580074 KIAA1551Q9HCM1 1747 aa15.44■□□□□ 0.06
ERBB2-210ENST00000580074 IL6STP40189 918 aaPredicted RBP15.44■□□□□ 0.06
ERBB2-210ENST00000580074 PLEKHF1Q96S99 279 aa15.44■□□□□ 0.06
ERBB2-210ENST00000580074 BCS1LQ9Y276 419 aa15.44■□□□□ 0.06
ERBB2-210ENST00000580074 ZNF330Q9Y3S2 320 aaPredicted RBP15.44■□□□□ 0.06
ERBB2-210ENST00000580074 GIGYF1O75420 1035 aaPredicted RBP15.43■□□□□ 0.06
ERBB2-210ENST00000580074 SNRPA1P09661 255 aaKnown RBP15.43■□□□□ 0.06
ERBB2-210ENST00000580074 PIM2Q9P1W9 311 aa15.43■□□□□ 0.06
ERBB2-210ENST00000580074 LAMB4A4D0S4 1761 aa15.42■□□□□ 0.06
ERBB2-210ENST00000580074 POLRMTO00411 1230 aaKnown RBP15.42■□□□□ 0.06
ERBB2-210ENST00000580074 EIF5P55010 431 aaKnown RBP15.42■□□□□ 0.06
ERBB2-210ENST00000580074 LMOD3Q0VAK6 560 aa15.42■□□□□ 0.06
ERBB2-210ENST00000580074 TAF7Q15545 349 aaPredicted RBP15.42■□□□□ 0.06
ERBB2-210ENST00000580074 MCM10Q7L590 875 aa15.42■□□□□ 0.06
ERBB2-210ENST00000580074 PRKRIP1Q9H875 184 aaPredicted RBP15.42■□□□□ 0.06
ERBB2-210ENST00000580074 PDZRN3Q9UPQ7 1066 aa15.42■□□□□ 0.06
ERBB2-210ENST00000580074 ZNF652Q9Y2D9 606 aa15.42■□□□□ 0.06
ERBB2-210ENST00000580074 DLG5Q8TDM6 1919 aa15.42■□□□□ 0.06
ERBB2-210ENST00000580074 ARFGEF1Q9Y6D6 1849 aa15.42■□□□□ 0.06
ERBB2-210ENST00000580074 BRCA1P38398 1863 aaKnown RBP15.42■□□□□ 0.06
ERBB2-210ENST00000580074 NRXN2Q9P2S2 1712 aa15.41■□□□□ 0.06
ERBB2-210ENST00000580074 NPHP1O15259 732 aa15.41■□□□□ 0.06
ERBB2-210ENST00000580074 TM4SF1P30408 202 aa15.41■□□□□ 0.06
ERBB2-210ENST00000580074 DDR1Q08345 913 aa15.41■□□□□ 0.06
ERBB2-210ENST00000580074 NFE2L2Q16236 605 aa15.41■□□□□ 0.06
ERBB2-210ENST00000580074 ATP10DQ9P241 1426 aa15.41■□□□□ 0.06
ERBB2-210ENST00000580074 CARMIL3Q8ND23 1372 aa15.4■□□□□ 0.06
ERBB2-210ENST00000580074 A0A0G2JLW4 131 aa15.4■□□□□ 0.06
ERBB2-210ENST00000580074 DPEP1P16444 411 aa15.4■□□□□ 0.06
ERBB2-210ENST00000580074 NFIXQ14938 502 aa15.4■□□□□ 0.06
ERBB2-210ENST00000580074 DALRD3Q5D0E6 543 aaKnown RBP15.4■□□□□ 0.06
ERBB2-210ENST00000580074 WWC3Q9ULE0 1092 aa15.4■□□□□ 0.06
ERBB2-210ENST00000580074 BCORQ6W2J9 1755 aa15.39■□□□□ 0.05
ERBB2-210ENST00000580074 AFDNP55196 1824 aaKnown RBP15.39■□□□□ 0.05
ERBB2-210ENST00000580074 SERPINB2P05120 415 aa15.39■□□□□ 0.05
ERBB2-210ENST00000580074 WDR43Q15061 677 aaKnown RBP eCLIP15.39■□□□□ 0.05
ERBB2-210ENST00000580074 GPBP1L1Q9HC44 474 aaPredicted RBP15.39■□□□□ 0.05
ERBB2-210ENST00000580074 KDM3BQ7LBC6 1761 aa15.39■□□□□ 0.05
ERBB2-210ENST00000580074 ADCY9O60503 1353 aa15.38■□□□□ 0.05
ERBB2-210ENST00000580074 RGL2O15211 777 aa15.38■□□□□ 0.05
ERBB2-210ENST00000580074 DZIP3Q86Y13 1208 aaKnown RBP15.38■□□□□ 0.05
ERBB2-210ENST00000580074 DLEC1Q9Y238 1755 aa15.38■□□□□ 0.05
ERBB2-210ENST00000580074 DCTN1Q14203 1278 aa15.37■□□□□ 0.05
ERBB2-210ENST00000580074 ARHGAP27Q6ZUM4 889 aa15.37■□□□□ 0.05
ERBB2-210ENST00000580074 A1BGP04217 495 aa15.36■□□□□ 0.05
ERBB2-210ENST00000580074 PDE6BP35913 854 aa15.36■□□□□ 0.05
ERBB2-210ENST00000580074 ST5P78524 1137 aa15.36■□□□□ 0.05
ERBB2-210ENST00000580074 CLEC4GQ6UXB4 293 aa15.36■□□□□ 0.05
ERBB2-210ENST00000580074 BICDL1Q6ZP65 573 aa15.36■□□□□ 0.05
ERBB2-210ENST00000580074 SETDB2Q96T68 719 aa15.36■□□□□ 0.05
ERBB2-210ENST00000580074 ZNF316A6NFI3 1004 aaPredicted RBP15.35■□□□□ 0.05
ERBB2-210ENST00000580074 H0YIN7 160 aa15.35■□□□□ 0.05
ERBB2-210ENST00000580074 BCL2L12Q9HB09 334 aa15.35■□□□□ 0.05
ERBB2-210ENST00000580074 BABAM1Q9NWV8 329 aa15.35■□□□□ 0.05
ERBB2-210ENST00000580074 TBC1D2BQ9UPU7 963 aa15.35■□□□□ 0.05
ERBB2-210ENST00000580074 KCNQ3O43525 872 aa15.34■□□□□ 0.05
ERBB2-210ENST00000580074 C1QTNF8P60827 252 aa15.34■□□□□ 0.05
ERBB2-210ENST00000580074 CNBD1Q8NA66 436 aa15.34■□□□□ 0.05
ERBB2-210ENST00000580074 USP16Q9Y5T5 823 aa15.34■□□□□ 0.05
ERBB2-210ENST00000580074 CAMTA2O94983 1202 aa15.33■□□□□ 0.04
ERBB2-210ENST00000580074 TBC1D9BQ66K14 1250 aa15.33■□□□□ 0.04
ERBB2-210ENST00000580074 C2CD5Q86YS7 1000 aa15.33■□□□□ 0.04
ERBB2-210ENST00000580074 TTLL6Q8N841 843 aa15.33■□□□□ 0.04
ERBB2-210ENST00000580074 ERBB4Q15303 1308 aa15.33■□□□□ 0.04
ERBB2-210ENST00000580074 CHRNA5P30532 468 aa15.32■□□□□ 0.04
ERBB2-210ENST00000580074 RIPK4P57078 832 aa15.32■□□□□ 0.04
ERBB2-210ENST00000580074 BRIP1Q9BX63 1249 aa15.32■□□□□ 0.04
ERBB2-210ENST00000580074 TSPYL4Q9UJ04 414 aa15.32■□□□□ 0.04
ERBB2-210ENST00000580074 KCNA3P22001 575 aa15.31■□□□□ 0.04
ERBB2-210ENST00000580074 KIF6Q6ZMV9 814 aa15.31■□□□□ 0.04
ERBB2-210ENST00000580074 RUNDC1Q96C34 613 aa15.31■□□□□ 0.04
ERBB2-210ENST00000580074 ZC3H4Q9UPT8 1303 aaKnown RBP15.31■□□□□ 0.04
ERBB2-210ENST00000580074 TMPOP42166 694 aaKnown RBP15.3■□□□□ 0.04
ERBB2-210ENST00000580074 SOGA3Q5TF21 947 aa15.3■□□□□ 0.04
ERBB2-210ENST00000580074 PRR5LQ6MZQ0 368 aa15.3■□□□□ 0.04
ERBB2-210ENST00000580074 NBPF5PQ86XG9 351 aaPredicted RBP15.3■□□□□ 0.04
ERBB2-210ENST00000580074 ZNF526Q8TF50 670 aaPredicted RBP15.3■□□□□ 0.04
ERBB2-210ENST00000580074 KDM2BQ8NHM5 1336 aa15.29■□□□□ 0.04
ERBB2-210ENST00000580074 SENP3-EIF4A1A0A087X0R7 540 aa15.29■□□□□ 0.04
ERBB2-210ENST00000580074 EIF4A1P60842 406 aaKnown RBP15.29■□□□□ 0.04
ERBB2-210ENST00000580074 ADAMTS8Q9UP79 889 aa15.29■□□□□ 0.04
ERBB2-210ENST00000580074 PRAMEF22A3QJZ6 481 aa15.28■□□□□ 0.04
ERBB2-210ENST00000580074 GTF2E1P29083 439 aaPredicted RBP15.28■□□□□ 0.04
ERBB2-210ENST00000580074 C9orf131Q5VYM1 1079 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms