RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 EZH2Q15910 746 aaKnown RBP20.5■□□□□ 0.87
CSNK1D-212ENST00000580061 DEFB132Q7Z7B7 95 aa20.5■□□□□ 0.87
CSNK1D-212ENST00000580061 C4BP0C0L5 1744 aa20.5■□□□□ 0.87
CSNK1D-212ENST00000580061 CYP19A1P11511 503 aaPredicted RBP20.49■□□□□ 0.87
CSNK1D-212ENST00000580061 EIF2S2P20042 333 aaKnown RBP20.49■□□□□ 0.87
CSNK1D-212ENST00000580061 HDGFL1Q5TGJ6 251 aa20.49■□□□□ 0.87
CSNK1D-212ENST00000580061 NUP188Q5SRE5 1749 aa20.48■□□□□ 0.87
CSNK1D-212ENST00000580061 STARD3NLO95772 234 aa20.48■□□□□ 0.87
CSNK1D-212ENST00000580061 LINC00116Q8NCU8 138 aa20.48■□□□□ 0.87
CSNK1D-212ENST00000580061 ZNF428Q96B54 188 aa20.48■□□□□ 0.87
CSNK1D-212ENST00000580061 NECTIN2Q92692 538 aa20.47■□□□□ 0.87
CSNK1D-212ENST00000580061 CHMP4AQ9BY43 222 aa20.47■□□□□ 0.87
CSNK1D-212ENST00000580061 CCDC30Q5VVM6 783 aa20.46■□□□□ 0.87
CSNK1D-212ENST00000580061 HMGB2P26583 209 aaKnown RBP20.45■□□□□ 0.86
CSNK1D-212ENST00000580061 ERBB4Q15303 1308 aa20.45■□□□□ 0.86
CSNK1D-212ENST00000580061 CNTNAP4Q9C0A0 1308 aa20.45■□□□□ 0.86
CSNK1D-212ENST00000580061 A1BGP04217 495 aa20.44■□□□□ 0.86
CSNK1D-212ENST00000580061 CRKLP46109 303 aaKnown RBP20.44■□□□□ 0.86
CSNK1D-212ENST00000580061 INTS5Q6P9B9 1019 aaKnown RBP20.44■□□□□ 0.86
CSNK1D-212ENST00000580061 TCERG1O14776 1098 aaKnown RBP20.43■□□□□ 0.86
CSNK1D-212ENST00000580061 RARSP54136 660 aaKnown RBP20.43■□□□□ 0.86
CSNK1D-212ENST00000580061 PDIA6Q15084 440 aa20.43■□□□□ 0.86
CSNK1D-212ENST00000580061 ALDH1L2Q3SY69 923 aa20.43■□□□□ 0.86
CSNK1D-212ENST00000580061 RC3H1Q5TC82 1133 aaKnown RBP20.43■□□□□ 0.86
CSNK1D-212ENST00000580061 SSH1Q8WYL5 1049 aa20.43■□□□□ 0.86
CSNK1D-212ENST00000580061 CCDC87Q9NVE4 849 aa20.43■□□□□ 0.86
CSNK1D-212ENST00000580061 CHPF2Q9P2E5 772 aa20.43■□□□□ 0.86
CSNK1D-212ENST00000580061 DBF4Q9UBU7 674 aaPredicted RBP20.43■□□□□ 0.86
CSNK1D-212ENST00000580061 UBR3Q6ZT12 1888 aa20.43■□□□□ 0.86
CSNK1D-212ENST00000580061 NBPF26B4DH59 902 aa20.42■□□□□ 0.86
CSNK1D-212ENST00000580061 NBPF14Q5TI25 921 aa20.42■□□□□ 0.86
CSNK1D-212ENST00000580061 NBPF10Q6P3W6 841 aaKnown RBP20.42■□□□□ 0.86
CSNK1D-212ENST00000580061 NBPF15Q8N660 670 aa20.42■□□□□ 0.86
CSNK1D-212ENST00000580061 DDX21Q9NR30 783 aaKnown RBP eCLIP20.42■□□□□ 0.86
CSNK1D-212ENST00000580061 ZBTB1Q9Y2K1 713 aa20.42■□□□□ 0.86
CSNK1D-212ENST00000580061 PIP4K2AP48426 406 aaPredicted RBP20.41■□□□□ 0.86
CSNK1D-212ENST00000580061 STK31Q9BXU1 1019 aa20.41■□□□□ 0.86
CSNK1D-212ENST00000580061 RCAN3Q9UKA8 241 aa20.41■□□□□ 0.86
CSNK1D-212ENST00000580061 TUBGCP6Q96RT7 1819 aa20.41■□□□□ 0.86
CSNK1D-212ENST00000580061 ANXA1P04083 346 aa20.4■□□□□ 0.86
CSNK1D-212ENST00000580061 CANXP27824 592 aaKnown RBP20.4■□□□□ 0.86
CSNK1D-212ENST00000580061 PROSER3Q2NL68 480 aa20.4■□□□□ 0.86
CSNK1D-212ENST00000580061 LRP10Q7Z4F1 713 aa20.4■□□□□ 0.86
CSNK1D-212ENST00000580061 SLC4A2P04920 1241 aa20.39■□□□□ 0.85
CSNK1D-212ENST00000580061 MYL6BP14649 208 aa20.39■□□□□ 0.85
CSNK1D-212ENST00000580061 IL6STP40189 918 aaPredicted RBP20.39■□□□□ 0.85
CSNK1D-212ENST00000580061 MRPL50Q8N5N7 158 aaKnown RBP20.39■□□□□ 0.85
CSNK1D-212ENST00000580061 BCL2L13Q9BXK5 485 aa20.39■□□□□ 0.85
CSNK1D-212ENST00000580061 SMC4Q9NTJ3 1288 aa20.39■□□□□ 0.85
CSNK1D-212ENST00000580061 AKT1S1Q96B36 256 aa20.38■□□□□ 0.85
CSNK1D-212ENST00000580061 AK7Q96M32 723 aa20.38■□□□□ 0.85
CSNK1D-212ENST00000580061 HYPKQ9NX55 129 aa20.38■□□□□ 0.85
CSNK1D-212ENST00000580061 QSER1Q2KHR3 1735 aa20.38■□□□□ 0.85
CSNK1D-212ENST00000580061 GNPATO15228 680 aa20.37■□□□□ 0.85
CSNK1D-212ENST00000580061 RPS6KA4O75676 772 aa20.37■□□□□ 0.85
CSNK1D-212ENST00000580061 BCAR3O75815 825 aa20.37■□□□□ 0.85
CSNK1D-212ENST00000580061 EIF5P55010 431 aaKnown RBP20.37■□□□□ 0.85
CSNK1D-212ENST00000580061 BRPF1P55201 1214 aaPredicted RBP20.37■□□□□ 0.85
CSNK1D-212ENST00000580061 ZNF827Q17R98 1081 aa20.37■□□□□ 0.85
CSNK1D-212ENST00000580061 C4AP0C0L4 1744 aa20.36■□□□□ 0.85
CSNK1D-212ENST00000580061 G2E3Q7L622 706 aa20.36■□□□□ 0.85
CSNK1D-212ENST00000580061 PHAXQ9H814 394 aaKnown RBP20.36■□□□□ 0.85
CSNK1D-212ENST00000580061 RTCBQ9Y3I0 505 aaKnown RBP20.36■□□□□ 0.85
CSNK1D-212ENST00000580061 CENPBP07199 599 aaPredicted RBP20.35■□□□□ 0.85
CSNK1D-212ENST00000580061 AMIGO3Q86WK7 504 aa20.35■□□□□ 0.85
CSNK1D-212ENST00000580061 ANO8Q9HCE9 1232 aaPredicted RBP20.35■□□□□ 0.85
CSNK1D-212ENST00000580061 COL15A1P39059 1388 aa20.34■□□□□ 0.85
CSNK1D-212ENST00000580061 FLIIQ13045 1269 aa20.33■□□□□ 0.85
CSNK1D-212ENST00000580061 SLC15A2Q16348 729 aa20.33■□□□□ 0.85
CSNK1D-212ENST00000580061 SMIM5Q71RC9 77 aa20.33■□□□□ 0.85
CSNK1D-212ENST00000580061 COPS6Q7L5N1 327 aa20.33■□□□□ 0.85
CSNK1D-212ENST00000580061 XAGE3Q8WTP9 111 aa20.33■□□□□ 0.85
CSNK1D-212ENST00000580061 STK32BQ9NY57 414 aa20.33■□□□□ 0.85
CSNK1D-212ENST00000580061 ZNF330Q9Y3S2 320 aaPredicted RBP20.33■□□□□ 0.85
CSNK1D-212ENST00000580061 KIF16BQ96L93 1317 aa20.32■□□□□ 0.84
CSNK1D-212ENST00000580061 BCORQ6W2J9 1755 aa20.32■□□□□ 0.84
CSNK1D-212ENST00000580061 ARFGEF2Q9Y6D5 1785 aa20.32■□□□□ 0.84
CSNK1D-212ENST00000580061 SSFA2P28290 1259 aa20.32■□□□□ 0.84
CSNK1D-212ENST00000580061 AIMP1Q12904 312 aaKnown RBP20.32■□□□□ 0.84
CSNK1D-212ENST00000580061 ADRA2BP18089 450 aa20.31■□□□□ 0.84
CSNK1D-212ENST00000580061 TTLL7Q6ZT98 887 aa20.31■□□□□ 0.84
CSNK1D-212ENST00000580061 NPM2Q86SE8 214 aaKnown RBP20.31■□□□□ 0.84
CSNK1D-212ENST00000580061 TFCP2L1Q9NZI6 479 aa20.31■□□□□ 0.84
CSNK1D-212ENST00000580061 NOB1Q9ULX3 412 aaKnown RBP20.31■□□□□ 0.84
CSNK1D-212ENST00000580061 PTPRCP08575 1304 aa20.3■□□□□ 0.84
CSNK1D-212ENST00000580061 NUP98P52948 1817 aa20.3■□□□□ 0.84
CSNK1D-212ENST00000580061 SCN7AQ01118 1682 aa20.3■□□□□ 0.84
CSNK1D-212ENST00000580061 A0A087WZG4 1122 aa20.3■□□□□ 0.84
CSNK1D-212ENST00000580061 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.3■□□□□ 0.84
CSNK1D-212ENST00000580061 PHF14O94880 888 aa20.3■□□□□ 0.84
CSNK1D-212ENST00000580061 TRAPPC3LQ5T215 181 aa20.3■□□□□ 0.84
CSNK1D-212ENST00000580061 ARHGEF1Q92888 912 aaKnown RBP20.3■□□□□ 0.84
CSNK1D-212ENST00000580061 FKBP5Q13451 457 aaPredicted RBP20.29■□□□□ 0.84
CSNK1D-212ENST00000580061 DZIP3Q86Y13 1208 aaKnown RBP20.29■□□□□ 0.84
CSNK1D-212ENST00000580061 TBC1D2BQ9UPU7 963 aa20.29■□□□□ 0.84
CSNK1D-212ENST00000580061 KIF6Q6ZMV9 814 aa20.28■□□□□ 0.84
CSNK1D-212ENST00000580061 FLAD1Q8NFF5 587 aa20.28■□□□□ 0.84
CSNK1D-212ENST00000580061 ARHGAP45Q92619 1136 aa20.28■□□□□ 0.84
CSNK1D-212ENST00000580061 FRAT1Q92837 279 aaPredicted RBP20.28■□□□□ 0.84
CSNK1D-212ENST00000580061 PNPLA7Q6ZV29 1317 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms