RNA–Protein interactions for RNA: ENST00000579954.1

SSH2-209, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 3 BASIC

Gene SSH2, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-209ENST00000579954 RPS6KA4O75676 772 aa11.93□□□□□ -0.5
SSH2-209ENST00000579954 STARD3NLO95772 234 aa11.93□□□□□ -0.5
SSH2-209ENST00000579954 RC3H1Q5TC82 1133 aaKnown RBP11.93□□□□□ -0.5
SSH2-209ENST00000579954 NPM2Q86SE8 214 aaKnown RBP11.93□□□□□ -0.5
SSH2-209ENST00000579954 MIS18AQ9NYP9 233 aa11.93□□□□□ -0.5
SSH2-209ENST00000579954 CANXP27824 592 aaKnown RBP11.92□□□□□ -0.5
SSH2-209ENST00000579954 TMPOP42166 694 aaKnown RBP11.92□□□□□ -0.5
SSH2-209ENST00000579954 TAF7Q15545 349 aaPredicted RBP11.92□□□□□ -0.5
SSH2-209ENST00000579954 VSIG10Q8N0Z9 540 aa11.92□□□□□ -0.5
SSH2-209ENST00000579954 ARHGEF1Q92888 912 aaKnown RBP11.92□□□□□ -0.5
SSH2-209ENST00000579954 LAS1LQ9Y4W2 734 aaKnown RBP11.92□□□□□ -0.5
SSH2-209ENST00000579954 ZPR1O75312 459 aa11.91□□□□□ -0.5
SSH2-209ENST00000579954 CYP19A1P11511 503 aaPredicted RBP11.91□□□□□ -0.5
SSH2-209ENST00000579954 CCDC184Q52MB2 194 aa11.91□□□□□ -0.5
SSH2-209ENST00000579954 PELP1Q8IZL8 1130 aaKnown RBP11.91□□□□□ -0.5
SSH2-209ENST00000579954 PNISRQ8TF01 805 aaKnown RBP11.91□□□□□ -0.5
SSH2-209ENST00000579954 SGIP1Q9BQI5 828 aa11.91□□□□□ -0.5
SSH2-209ENST00000579954 TEX13AQ9BXU3 409 aaPredicted RBP11.91□□□□□ -0.5
SSH2-209ENST00000579954 ZBTB1Q9Y2K1 713 aa11.91□□□□□ -0.5
SSH2-209ENST00000579954 COL15A1P39059 1388 aa11.91□□□□□ -0.5
SSH2-209ENST00000579954 SENP3-EIF4A1A0A087X0R7 540 aa11.9□□□□□ -0.5
SSH2-209ENST00000579954 INTS5Q6P9B9 1019 aaKnown RBP11.9□□□□□ -0.5
SSH2-209ENST00000579954 TSPYL4Q9UJ04 414 aa11.9□□□□□ -0.5
SSH2-209ENST00000579954 SOS1Q07889 1333 aaPredicted RBP11.89□□□□□ -0.51
SSH2-209ENST00000579954 PRAMEF22A3QJZ6 481 aa11.89□□□□□ -0.51
SSH2-209ENST00000579954 MMP10P09238 476 aa11.89□□□□□ -0.51
SSH2-209ENST00000579954 SYT17Q9BSW7 474 aa11.89□□□□□ -0.51
SSH2-209ENST00000579954 SRP68Q9UHB9 627 aaKnown RBP11.89□□□□□ -0.51
SSH2-209ENST00000579954 SCN7AQ01118 1682 aa11.89□□□□□ -0.51
SSH2-209ENST00000579954 APAF1O14727 1248 aa11.88□□□□□ -0.51
SSH2-209ENST00000579954 SNRPA1P09661 255 aaKnown RBP11.88□□□□□ -0.51
SSH2-209ENST00000579954 PIP4K2AP48426 406 aaPredicted RBP11.88□□□□□ -0.51
SSH2-209ENST00000579954 USPL1Q5W0Q7 1092 aa11.88□□□□□ -0.51
SSH2-209ENST00000579954 USP42Q9H9J4 1324 aaKnown RBP11.87□□□□□ -0.51
SSH2-209ENST00000579954 BCORQ6W2J9 1755 aa11.87□□□□□ -0.51
SSH2-209ENST00000579954 A1BGP04217 495 aa11.87□□□□□ -0.51
SSH2-209ENST00000579954 GYS1P13807 737 aa11.87□□□□□ -0.51
SSH2-209ENST00000579954 NLGN1Q8N2Q7 840 aa11.87□□□□□ -0.51
SSH2-209ENST00000579954 PARP3Q9Y6F1 533 aa11.87□□□□□ -0.51
SSH2-209ENST00000579954 N4BP2Q86UW6 1770 aaPredicted RBP11.87□□□□□ -0.51
SSH2-209ENST00000579954 A0A087WZG4 1122 aa11.86□□□□□ -0.51
SSH2-209ENST00000579954 BICDL1Q6ZP65 573 aa11.86□□□□□ -0.51
SSH2-209ENST00000579954 FAM9BQ8IZU0 186 aa11.86□□□□□ -0.51
SSH2-209ENST00000579954 NLGN2Q8NFZ4 835 aa11.86□□□□□ -0.51
SSH2-209ENST00000579954 USP16Q9Y5T5 823 aa11.86□□□□□ -0.51
SSH2-209ENST00000579954 AFDNP55196 1824 aaKnown RBP11.86□□□□□ -0.51
SSH2-209ENST00000579954 FKBP8Q14318 412 aa11.85□□□□□ -0.51
SSH2-209ENST00000579954 GPR162Q16538 588 aa11.85□□□□□ -0.51
SSH2-209ENST00000579954 NGEFQ8N5V2 710 aa11.85□□□□□ -0.51
SSH2-209ENST00000579954 NARFQ9UHQ1 456 aa11.85□□□□□ -0.51
SSH2-209ENST00000579954 WWC3Q9ULE0 1092 aa11.85□□□□□ -0.51
SSH2-209ENST00000579954 TRIM35Q9UPQ4 493 aa11.85□□□□□ -0.51
SSH2-209ENST00000579954 TBC1D2BQ9UPU7 963 aa11.85□□□□□ -0.51
SSH2-209ENST00000579954 KIF13BQ9NQT8 1826 aa11.84□□□□□ -0.51
SSH2-209ENST00000579954 NPHP1O15259 732 aa11.84□□□□□ -0.51
SSH2-209ENST00000579954 EIF2S2P20042 333 aaKnown RBP11.84□□□□□ -0.51
SSH2-209ENST00000579954 IL6STP40189 918 aaPredicted RBP11.84□□□□□ -0.51
SSH2-209ENST00000579954 EIF5P55010 431 aaKnown RBP11.84□□□□□ -0.51
SSH2-209ENST00000579954 EIF4A1P60842 406 aaKnown RBP11.84□□□□□ -0.51
SSH2-209ENST00000579954 SALL2Q9Y467 1007 aaPredicted RBP11.84□□□□□ -0.51
SSH2-209ENST00000579954 DZIP3Q86Y13 1208 aaKnown RBP11.83□□□□□ -0.52
SSH2-209ENST00000579954 NECTIN2Q92692 538 aa11.83□□□□□ -0.52
SSH2-209ENST00000579954 CHD4Q14839 1912 aa11.82□□□□□ -0.52
SSH2-209ENST00000579954 GIGYF1O75420 1035 aaPredicted RBP11.82□□□□□ -0.52
SSH2-209ENST00000579954 MYL6BP14649 208 aa11.82□□□□□ -0.52
SSH2-209ENST00000579954 CALD1Q05682 793 aaKnown RBP11.82□□□□□ -0.52
SSH2-209ENST00000579954 CD2APQ9Y5K6 639 aa11.82□□□□□ -0.52
SSH2-209ENST00000579954 NUP98P52948 1817 aa11.81□□□□□ -0.52
SSH2-209ENST00000579954 DDR1Q08345 913 aa11.81□□□□□ -0.52
SSH2-209ENST00000579954 BABAM1Q9NWV8 329 aa11.81□□□□□ -0.52
SSH2-209ENST00000579954 CACNA1SQ13698 1873 aa11.8□□□□□ -0.52
SSH2-209ENST00000579954 C10orf71Q711Q0 1435 aa11.8□□□□□ -0.52
SSH2-209ENST00000579954 NFIXQ14938 502 aa11.8□□□□□ -0.52
SSH2-209ENST00000579954 KIF6Q6ZMV9 814 aa11.8□□□□□ -0.52
SSH2-209ENST00000579954 ZNF652Q9Y2D9 606 aa11.8□□□□□ -0.52
SSH2-209ENST00000579954 KIAA1551Q9HCM1 1747 aa11.8□□□□□ -0.52
SSH2-209ENST00000579954 NBPF26B4DH59 902 aa11.79□□□□□ -0.52
SSH2-209ENST00000579954 POLRMTO00411 1230 aaKnown RBP11.79□□□□□ -0.52
SSH2-209ENST00000579954 GNAI1P63096 354 aa11.79□□□□□ -0.52
SSH2-209ENST00000579954 KRT24Q2M2I5 525 aa11.79□□□□□ -0.52
SSH2-209ENST00000579954 TBC1D9BQ66K14 1250 aa11.79□□□□□ -0.52
SSH2-209ENST00000579954 NBPF10Q6P3W6 841 aaKnown RBP11.79□□□□□ -0.52
SSH2-209ENST00000579954 NBPF15Q8N660 670 aa11.79□□□□□ -0.52
SSH2-209ENST00000579954 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
SSH2-209ENST00000579954 MBIPQ9NS73 344 aa11.79□□□□□ -0.52
SSH2-209ENST00000579954 BRCA1P38398 1863 aaKnown RBP11.78□□□□□ -0.52
SSH2-209ENST00000579954 PXDNLA1KZ92 1463 aa11.78□□□□□ -0.52
SSH2-209ENST00000579954 NRXN2Q9P2S2 1712 aa11.78□□□□□ -0.52
SSH2-209ENST00000579954 FAM177BA6PVY3 158 aa11.78□□□□□ -0.52
SSH2-209ENST00000579954 CHL1O00533 1208 aa11.78□□□□□ -0.52
SSH2-209ENST00000579954 CAMTA2O94983 1202 aa11.78□□□□□ -0.52
SSH2-209ENST00000579954 SERPINB2P05120 415 aa11.78□□□□□ -0.52
SSH2-209ENST00000579954 TM4SF1P30408 202 aa11.78□□□□□ -0.52
SSH2-209ENST00000579954 SETDB2Q96T68 719 aa11.78□□□□□ -0.52
SSH2-209ENST00000579954 BCL2L12Q9HB09 334 aa11.78□□□□□ -0.52
SSH2-209ENST00000579954 IFT57Q9NWB7 429 aa11.78□□□□□ -0.52
SSH2-209ENST00000579954 CARMIL3Q8ND23 1372 aa11.78□□□□□ -0.52
SSH2-209ENST00000579954 ANKRD36CQ5JPF3 1778 aa11.77□□□□□ -0.52
SSH2-209ENST00000579954 ANKRD31Q8N7Z5 1873 aa11.77□□□□□ -0.53
SSH2-209ENST00000579954 A0A0G2JLW4 131 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms