RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 NMRK2Q9NPI5 230 aa14.42□□□□□ -0.1
CSNK1D-210ENST00000579308 ZBTB1Q9Y2K1 713 aa14.42□□□□□ -0.1
CSNK1D-210ENST00000579308 NPC1L1Q9UHC9 1359 aa14.42□□□□□ -0.1
CSNK1D-210ENST00000579308 ADAMTS7Q9UKP4 1686 aa14.42□□□□□ -0.1
CSNK1D-210ENST00000579308 KCPQ6ZWJ8 1503 aa14.41□□□□□ -0.1
CSNK1D-210ENST00000579308 TJP1Q07157 1748 aa14.41□□□□□ -0.1
CSNK1D-210ENST00000579308 IL17REQ8NFR9 667 aa14.41□□□□□ -0.1
CSNK1D-210ENST00000579308 IFFO2Q5TF58 517 aa14.4□□□□□ -0.1
CSNK1D-210ENST00000579308 DNAJC5GQ8N7S2 189 aa14.4□□□□□ -0.1
CSNK1D-210ENST00000579308 SCN11AQ9UI33 1791 aa14.39□□□□□ -0.11
CSNK1D-210ENST00000579308 COL15A1P39059 1388 aa14.39□□□□□ -0.11
CSNK1D-210ENST00000579308 APLP1P51693 650 aa14.39□□□□□ -0.11
CSNK1D-210ENST00000579308 EIF5P55010 431 aaKnown RBP14.39□□□□□ -0.11
CSNK1D-210ENST00000579308 STARD3NLO95772 234 aa14.38□□□□□ -0.11
CSNK1D-210ENST00000579308 SERPINB2P05120 415 aa14.38□□□□□ -0.11
CSNK1D-210ENST00000579308 CANXP27824 592 aaKnown RBP14.38□□□□□ -0.11
CSNK1D-210ENST00000579308 ZNF496Q96IT1 587 aaPredicted RBP14.38□□□□□ -0.11
CSNK1D-210ENST00000579308 COL3A1P02461 1466 aaPredicted RBP14.38□□□□□ -0.11
CSNK1D-210ENST00000579308 GNAT3A8MTJ3 354 aa14.37□□□□□ -0.11
CSNK1D-210ENST00000579308 ZNF790Q6PG37 636 aa14.37□□□□□ -0.11
CSNK1D-210ENST00000579308 GAS2L2Q8NHY3 880 aa14.37□□□□□ -0.11
CSNK1D-210ENST00000579308 RBM46Q8TBY0 533 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-210ENST00000579308 RNF181Q9P0P0 153 aa14.37□□□□□ -0.11
CSNK1D-210ENST00000579308 BRCA1P38398 1863 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-210ENST00000579308 A0A087WZG4 1122 aa14.36□□□□□ -0.11
CSNK1D-210ENST00000579308 U2SURPO15042 1029 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-210ENST00000579308 PRELPP51888 382 aa14.36□□□□□ -0.11
CSNK1D-210ENST00000579308 CACNB1Q02641 598 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-210ENST00000579308 TTC5Q8N0Z6 440 aa14.36□□□□□ -0.11
CSNK1D-210ENST00000579308 TEX13AQ9BXU3 409 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-210ENST00000579308 TTLL6Q8N841 843 aa14.35□□□□□ -0.11
CSNK1D-210ENST00000579308 PHACTR3Q96KR7 559 aa14.35□□□□□ -0.11
CSNK1D-210ENST00000579308 CEMIPQ8WUJ3 1361 aa14.34□□□□□ -0.11
CSNK1D-210ENST00000579308 HEG1Q9ULI3 1381 aa14.34□□□□□ -0.11
CSNK1D-210ENST00000579308 TEFQ10587 303 aa14.34□□□□□ -0.11
CSNK1D-210ENST00000579308 FSTL1Q12841 308 aa14.34□□□□□ -0.11
CSNK1D-210ENST00000579308 TBC1D9BQ66K14 1250 aa14.34□□□□□ -0.11
CSNK1D-210ENST00000579308 C2CD5Q86YS7 1000 aa14.34□□□□□ -0.11
CSNK1D-210ENST00000579308 RRAGCQ9HB90 399 aa14.34□□□□□ -0.11
CSNK1D-210ENST00000579308 KDM2BQ8NHM5 1336 aa14.34□□□□□ -0.11
CSNK1D-210ENST00000579308 IL6STP40189 918 aaPredicted RBP14.33□□□□□ -0.12
CSNK1D-210ENST00000579308 RASSF7Q02833 373 aa14.33□□□□□ -0.12
CSNK1D-210ENST00000579308 RSPH6AQ9H0K4 717 aa14.33□□□□□ -0.12
CSNK1D-210ENST00000579308 ARFGEF1Q9Y6D6 1849 aa14.33□□□□□ -0.12
CSNK1D-210ENST00000579308 ZC3H4Q9UPT8 1303 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-210ENST00000579308 CARMIL3Q8ND23 1372 aa14.33□□□□□ -0.12
CSNK1D-210ENST00000579308 H0YIN7 160 aa14.32□□□□□ -0.12
CSNK1D-210ENST00000579308 KCNQ3O43525 872 aa14.32□□□□□ -0.12
CSNK1D-210ENST00000579308 A1BGP04217 495 aa14.32□□□□□ -0.12
CSNK1D-210ENST00000579308 LMNB1P20700 586 aa14.32□□□□□ -0.12
CSNK1D-210ENST00000579308 CNGB1Q14028 1251 aaPredicted RBP14.32□□□□□ -0.12
CSNK1D-210ENST00000579308 BICDL1Q6ZP65 573 aa14.32□□□□□ -0.12
CSNK1D-210ENST00000579308 FMNL2Q96PY5 1086 aa14.32□□□□□ -0.12
CSNK1D-210ENST00000579308 BRIP1Q9BX63 1249 aa14.32□□□□□ -0.12
CSNK1D-210ENST00000579308 TBC1D2BQ9UPU7 963 aa14.32□□□□□ -0.12
CSNK1D-210ENST00000579308 NFKBIEO00221 500 aa14.31□□□□□ -0.12
CSNK1D-210ENST00000579308 C16orf71Q8IYS4 520 aaPredicted RBP14.31□□□□□ -0.12
CSNK1D-210ENST00000579308 NRXN2Q9P2S2 1712 aa14.31□□□□□ -0.12
CSNK1D-210ENST00000579308 GLTPD2A6NH11 291 aa14.3□□□□□ -0.12
CSNK1D-210ENST00000579308 BTBD11A6QL63 1104 aa14.3□□□□□ -0.12
CSNK1D-210ENST00000579308 CAMTA2O94983 1202 aa14.3□□□□□ -0.12
CSNK1D-210ENST00000579308 PRKAR2BP31323 418 aa14.3□□□□□ -0.12
CSNK1D-210ENST00000579308 PRR5LQ6MZQ0 368 aa14.3□□□□□ -0.12
CSNK1D-210ENST00000579308 PDZRN3Q9UPQ7 1066 aa14.3□□□□□ -0.12
CSNK1D-210ENST00000579308 USP16Q9Y5T5 823 aa14.3□□□□□ -0.12
CSNK1D-210ENST00000579308 UBR2Q8IWV8 1755 aa14.29□□□□□ -0.12
CSNK1D-210ENST00000579308 PDE6BP35913 854 aa14.29□□□□□ -0.12
CSNK1D-210ENST00000579308 HTRA3P83110 453 aa14.29□□□□□ -0.12
CSNK1D-210ENST00000579308 CCDC24Q8N4L8 307 aa14.28□□□□□ -0.12
CSNK1D-210ENST00000579308 CFAP53Q96M91 514 aa14.28□□□□□ -0.12
CSNK1D-210ENST00000579308 SETDB2Q96T68 719 aa14.28□□□□□ -0.12
CSNK1D-210ENST00000579308 POTECB2RU33 542 aa14.27□□□□□ -0.13
CSNK1D-210ENST00000579308 VEGFAP15692 232 aaPredicted RBP14.27□□□□□ -0.13
CSNK1D-210ENST00000579308 PPP2R1AP30153 589 aa14.27□□□□□ -0.13
CSNK1D-210ENST00000579308 JMYQ8N9B5 988 aa14.27□□□□□ -0.13
CSNK1D-210ENST00000579308 SMC1BQ8NDV3 1235 aa14.27□□□□□ -0.13
CSNK1D-210ENST00000579308 ZNF622Q969S3 477 aaKnown RBP eCLIP14.27□□□□□ -0.139e-8■□□□□ 10
CSNK1D-210ENST00000579308 KLRG1Q96E93 195 aa14.27□□□□□ -0.13
CSNK1D-210ENST00000579308 NUDCQ9Y266 331 aa14.27□□□□□ -0.13
CSNK1D-210ENST00000579308 ZNF330Q9Y3S2 320 aaPredicted RBP14.27□□□□□ -0.13
CSNK1D-210ENST00000579308 AFDNP55196 1824 aaKnown RBP14.27□□□□□ -0.13
CSNK1D-210ENST00000579308 PRAMEF22A3QJZ6 481 aa14.26□□□□□ -0.13
CSNK1D-210ENST00000579308 C21orf2O43822 256 aa14.26□□□□□ -0.13
CSNK1D-210ENST00000579308 CLEC4GQ6UXB4 293 aa14.26□□□□□ -0.13
CSNK1D-210ENST00000579308 MCM10Q7L590 875 aa14.26□□□□□ -0.13
CSNK1D-210ENST00000579308 PCNTO95613 3336 aa14.26□□□□□ -0.13
CSNK1D-210ENST00000579308 HTATSF1O43719 755 aaKnown RBP14.25□□□□□ -0.13
CSNK1D-210ENST00000579308 SNRPA1P09661 255 aaKnown RBP14.25□□□□□ -0.13
CSNK1D-210ENST00000579308 U2AF1L5P0DN76 240 aaPredicted RBP14.25□□□□□ -0.13
CSNK1D-210ENST00000579308 SRGNP10124 158 aa14.25□□□□□ -0.13
CSNK1D-210ENST00000579308 U2AF1Q01081 240 aaKnown RBP eCLIP14.25□□□□□ -0.13
CSNK1D-210ENST00000579308 STYK1Q6J9G0 422 aa14.25□□□□□ -0.13
CSNK1D-210ENST00000579308 DZIP3Q86Y13 1208 aaKnown RBP14.25□□□□□ -0.13
CSNK1D-210ENST00000579308 SBF1O95248 1867 aa14.25□□□□□ -0.13
CSNK1D-210ENST00000579308 LTBP3Q9NS15 1303 aa14.24□□□□□ -0.13
CSNK1D-210ENST00000579308 NBPF26B4DH59 902 aa14.24□□□□□ -0.13
CSNK1D-210ENST00000579308 PIP4K2AP48426 406 aaPredicted RBP14.24□□□□□ -0.13
CSNK1D-210ENST00000579308 NBPF10Q6P3W6 841 aaKnown RBP14.24□□□□□ -0.13
CSNK1D-210ENST00000579308 NBPF15Q8N660 670 aa14.24□□□□□ -0.13
CSNK1D-210ENST00000579308 CNBD1Q8NA66 436 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms