RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 FCHSD2O94868 740 aa23.38■■□□□ 1.33
SLC9A3R1-203ENST00000578958 NEFMP07197 916 aa23.38■■□□□ 1.33
SLC9A3R1-203ENST00000578958 NPM2Q86SE8 214 aaKnown RBP23.38■■□□□ 1.33
SLC9A3R1-203ENST00000578958 COL15A1P39059 1388 aa23.38■■□□□ 1.33
SLC9A3R1-203ENST00000578958 BTBD11A6QL63 1104 aa23.37■■□□□ 1.33
SLC9A3R1-203ENST00000578958 ZNF496Q96IT1 587 aaPredicted RBP23.37■■□□□ 1.33
SLC9A3R1-203ENST00000578958 GPBP1L1Q9HC44 474 aaPredicted RBP23.37■■□□□ 1.33
SLC9A3R1-203ENST00000578958 NARFQ9UHQ1 456 aa23.37■■□□□ 1.33
SLC9A3R1-203ENST00000578958 ATP10DQ9P241 1426 aa23.36■■□□□ 1.33
SLC9A3R1-203ENST00000578958 DDR1Q08345 913 aa23.36■■□□□ 1.33
SLC9A3R1-203ENST00000578958 FMNL2Q96PY5 1086 aa23.36■■□□□ 1.33
SLC9A3R1-203ENST00000578958 ZNF330Q9Y3S2 320 aaPredicted RBP23.36■■□□□ 1.33
SLC9A3R1-203ENST00000578958 A0A087WZG4 1122 aa23.35■■□□□ 1.33
SLC9A3R1-203ENST00000578958 ARHGAP27Q6ZUM4 889 aa23.35■■□□□ 1.33
SLC9A3R1-203ENST00000578958 ZNF526Q8TF50 670 aaPredicted RBP23.35■■□□□ 1.33
SLC9A3R1-203ENST00000578958 KIF13BQ9NQT8 1826 aa23.35■■□□□ 1.33
SLC9A3R1-203ENST00000578958 SENP3-EIF4A1A0A087X0R7 540 aa23.34■■□□□ 1.33
SLC9A3R1-203ENST00000578958 TM4SF1P30408 202 aa23.34■■□□□ 1.33
SLC9A3R1-203ENST00000578958 PIM2Q9P1W9 311 aa23.34■■□□□ 1.33
SLC9A3R1-203ENST00000578958 HEG1Q9ULI3 1381 aa23.34■■□□□ 1.33
SLC9A3R1-203ENST00000578958 N4BP2Q86UW6 1770 aaPredicted RBP23.34■■□□□ 1.33
SLC9A3R1-203ENST00000578958 POLRMTO00411 1230 aaKnown RBP23.33■■□□□ 1.33
SLC9A3R1-203ENST00000578958 CEMIPQ8WUJ3 1361 aa23.31■■□□□ 1.32
SLC9A3R1-203ENST00000578958 NFIXQ14938 502 aa23.31■■□□□ 1.32
SLC9A3R1-203ENST00000578958 DALRD3Q5D0E6 543 aaKnown RBP23.31■■□□□ 1.32
SLC9A3R1-203ENST00000578958 MCM10Q7L590 875 aa23.31■■□□□ 1.32
SLC9A3R1-203ENST00000578958 UBR2Q8IWV8 1755 aa23.3■■□□□ 1.32
SLC9A3R1-203ENST00000578958 BICDL1Q6ZP65 573 aa23.3■■□□□ 1.32
SLC9A3R1-203ENST00000578958 SERPINB2P05120 415 aa23.29■■□□□ 1.32
SLC9A3R1-203ENST00000578958 EIF5P55010 431 aaKnown RBP23.29■■□□□ 1.32
SLC9A3R1-203ENST00000578958 HTATSF1O43719 755 aaKnown RBP23.28■■□□□ 1.32
SLC9A3R1-203ENST00000578958 KCNA3P22001 575 aa23.28■■□□□ 1.32
SLC9A3R1-203ENST00000578958 CHRNA5P30532 468 aa23.28■■□□□ 1.32
SLC9A3R1-203ENST00000578958 ADCY9O60503 1353 aa23.27■■□□□ 1.32
SLC9A3R1-203ENST00000578958 KCNQ3O43525 872 aa23.27■■□□□ 1.32
SLC9A3R1-203ENST00000578958 IL6STP40189 918 aaPredicted RBP23.27■■□□□ 1.32
SLC9A3R1-203ENST00000578958 KIAA1551Q9HCM1 1747 aa23.27■■□□□ 1.32
SLC9A3R1-203ENST00000578958 DCTN1Q14203 1278 aa23.26■■□□□ 1.31
SLC9A3R1-203ENST00000578958 PNNQ9H307 717 aaKnown RBP23.26■■□□□ 1.31
SLC9A3R1-203ENST00000578958 BCL2L12Q9HB09 334 aa23.26■■□□□ 1.31
SLC9A3R1-203ENST00000578958 TBC1D2BQ9UPU7 963 aa23.26■■□□□ 1.31
SLC9A3R1-203ENST00000578958 SIPA1L3O60292 1781 aaPredicted RBP23.25■■□□□ 1.31
SLC9A3R1-203ENST00000578958 NPHP1O15259 732 aa23.25■■□□□ 1.31
SLC9A3R1-203ENST00000578958 A1BGP04217 495 aa23.25■■□□□ 1.31
SLC9A3R1-203ENST00000578958 SNRPA1P09661 255 aaKnown RBP23.24■■□□□ 1.31
SLC9A3R1-203ENST00000578958 TAF7Q15545 349 aaPredicted RBP23.23■■□□□ 1.31
SLC9A3R1-203ENST00000578958 MAPK8IP3Q9UPT6 1336 aa23.22■■□□□ 1.31
SLC9A3R1-203ENST00000578958 H0YIN7 160 aa23.21■■□□□ 1.31
SLC9A3R1-203ENST00000578958 TBC1D9BQ66K14 1250 aa23.21■■□□□ 1.31
SLC9A3R1-203ENST00000578958 USP16Q9Y5T5 823 aa23.21■■□□□ 1.31
SLC9A3R1-203ENST00000578958 C9orf131Q5VYM1 1079 aa23.2■■□□□ 1.3
SLC9A3R1-203ENST00000578958 DZIP3Q86Y13 1208 aaKnown RBP23.2■■□□□ 1.3
SLC9A3R1-203ENST00000578958 C2CD5Q86YS7 1000 aa23.2■■□□□ 1.3
SLC9A3R1-203ENST00000578958 SETDB2Q96T68 719 aa23.2■■□□□ 1.3
SLC9A3R1-203ENST00000578958 RALBP1Q15311 655 aa23.19■■□□□ 1.3
SLC9A3R1-203ENST00000578958 BRCA1P38398 1863 aaKnown RBP23.19■■□□□ 1.3
SLC9A3R1-203ENST00000578958 CARMIL3Q8ND23 1372 aa23.18■■□□□ 1.3
SLC9A3R1-203ENST00000578958 PIP4K2AP48426 406 aaPredicted RBP23.18■■□□□ 1.3
SLC9A3R1-203ENST00000578958 TTLL6Q8N841 843 aa23.18■■□□□ 1.3
SLC9A3R1-203ENST00000578958 PNISRQ8TF01 805 aaKnown RBP23.18■■□□□ 1.3
SLC9A3R1-203ENST00000578958 AFDNP55196 1824 aaKnown RBP23.17■■□□□ 1.3
SLC9A3R1-203ENST00000578958 PRAMEF22A3QJZ6 481 aa23.17■■□□□ 1.3
SLC9A3R1-203ENST00000578958 PDE6BP35913 854 aa23.17■■□□□ 1.3
SLC9A3R1-203ENST00000578958 DDX10Q13206 875 aaKnown RBP23.17■■□□□ 1.3
SLC9A3R1-203ENST00000578958 NFE2L2Q16236 605 aa23.17■■□□□ 1.3
SLC9A3R1-203ENST00000578958 MIS18AQ9NYP9 233 aa23.17■■□□□ 1.3
SLC9A3R1-203ENST00000578958 ZNF652Q9Y2D9 606 aa23.17■■□□□ 1.3
SLC9A3R1-203ENST00000578958 ARFGEF1Q9Y6D6 1849 aa23.17■■□□□ 1.3
SLC9A3R1-203ENST00000578958 CAMTA2O94983 1202 aa23.16■■□□□ 1.3
SLC9A3R1-203ENST00000578958 ZNF622Q969S3 477 aaKnown RBP eCLIP23.16■■□□□ 1.3
SLC9A3R1-203ENST00000578958 RNF181Q9P0P0 153 aa23.16■■□□□ 1.3
SLC9A3R1-203ENST00000578958 PDZRN3Q9UPQ7 1066 aa23.16■■□□□ 1.3
SLC9A3R1-203ENST00000578958 ST5P78524 1137 aa23.15■■□□□ 1.3
SLC9A3R1-203ENST00000578958 CNBD1Q8NA66 436 aa23.15■■□□□ 1.3
SLC9A3R1-203ENST00000578958 PLEKHF1Q96S99 279 aa23.15■■□□□ 1.3
SLC9A3R1-203ENST00000578958 BRIP1Q9BX63 1249 aa23.15■■□□□ 1.3
SLC9A3R1-203ENST00000578958 NRXN2Q9P2S2 1712 aa23.13■■□□□ 1.29
SLC9A3R1-203ENST00000578958 PRR5LQ6MZQ0 368 aa23.13■■□□□ 1.29
SLC9A3R1-203ENST00000578958 CCDC24Q8N4L8 307 aa23.13■■□□□ 1.29
SLC9A3R1-203ENST00000578958 SCN7AQ01118 1682 aa23.13■■□□□ 1.29
SLC9A3R1-203ENST00000578958 CLEC4GQ6UXB4 293 aa23.12■■□□□ 1.29
SLC9A3R1-203ENST00000578958 KIF3CO14782 793 aa23.11■■□□□ 1.29
SLC9A3R1-203ENST00000578958 NBPF5PQ86XG9 351 aaPredicted RBP23.11■■□□□ 1.29
SLC9A3R1-203ENST00000578958 C16orf71Q8IYS4 520 aaPredicted RBP23.11■■□□□ 1.29
SLC9A3R1-203ENST00000578958 KDM2BQ8NHM5 1336 aa23.1■■□□□ 1.29
SLC9A3R1-203ENST00000578958 THUMPD2Q9BTF0 503 aaKnown RBP23.1■■□□□ 1.29
SLC9A3R1-203ENST00000578958 RASSF7Q02833 373 aa23.09■■□□□ 1.29
SLC9A3R1-203ENST00000578958 NGEFQ8N5V2 710 aa23.09■■□□□ 1.29
SLC9A3R1-203ENST00000578958 NBPF26B4DH59 902 aa23.08■■□□□ 1.29
SLC9A3R1-203ENST00000578958 LMNB1P20700 586 aa23.08■■□□□ 1.29
SLC9A3R1-203ENST00000578958 NBPF10Q6P3W6 841 aaKnown RBP23.08■■□□□ 1.29
SLC9A3R1-203ENST00000578958 NBPF15Q8N660 670 aa23.08■■□□□ 1.29
SLC9A3R1-203ENST00000578958 NMRK2Q9NPI5 230 aa23.08■■□□□ 1.29
SLC9A3R1-203ENST00000578958 ZNF219Q9P2Y4 722 aaPredicted RBP23.08■■□□□ 1.29
SLC9A3R1-203ENST00000578958 MYBBP1AQ9BQG0 1328 aaKnown RBP23.08■■□□□ 1.28
SLC9A3R1-203ENST00000578958 TOMM70O94826 608 aa23.07■■□□□ 1.28
SLC9A3R1-203ENST00000578958 HSPA6P17066 643 aa23.07■■□□□ 1.28
SLC9A3R1-203ENST00000578958 RIPK4P57078 832 aa23.07■■□□□ 1.28
SLC9A3R1-203ENST00000578958 NIP7Q9Y221 180 aaKnown RBP eCLIP23.07■■□□□ 1.28
SLC9A3R1-203ENST00000578958 GTF2E1P29083 439 aaPredicted RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms