RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 ARHGEF1Q92888 912 aaKnown RBP14.98□□□□□ -0.01
ERBB2-208ENST00000578630 PDGFDQ9GZP0 370 aaPredicted RBP14.98□□□□□ -0.01
ERBB2-208ENST00000578630 MTFR1LQ9H019 292 aa14.98□□□□□ -0.01
ERBB2-208ENST00000578630 KCPQ6ZWJ8 1503 aa14.97□□□□□ -0.01
ERBB2-208ENST00000578630 A0A087WZG4 1122 aa14.97□□□□□ -0.01
ERBB2-208ENST00000578630 ZBTB7AO95365 584 aa14.97□□□□□ -0.01
ERBB2-208ENST00000578630 A1BGP04217 495 aa14.97□□□□□ -0.01
ERBB2-208ENST00000578630 CHMP4AQ9BY43 222 aa14.97□□□□□ -0.01
ERBB2-208ENST00000578630 MBIPQ9NS73 344 aa14.97□□□□□ -0.01
ERBB2-208ENST00000578630 ATF5Q9Y2D1 282 aaPredicted RBP14.97□□□□□ -0.01
ERBB2-208ENST00000578630 PRAMEF22A3QJZ6 481 aa14.96□□□□□ -0.01
ERBB2-208ENST00000578630 IL6STP40189 918 aaPredicted RBP14.96□□□□□ -0.01
ERBB2-208ENST00000578630 ZBTB1Q9Y2K1 713 aa14.96□□□□□ -0.01
ERBB2-208ENST00000578630 ZNF831Q5JPB2 1677 aa14.96□□□□□ -0.01
ERBB2-208ENST00000578630 SIPA1L3O60292 1781 aaPredicted RBP14.96□□□□□ -0.02
ERBB2-208ENST00000578630 C4BP0C0L5 1744 aa14.95□□□□□ -0.02
ERBB2-208ENST00000578630 ZPR1O75312 459 aa14.95□□□□□ -0.02
ERBB2-208ENST00000578630 EIF2S2P20042 333 aaKnown RBP14.95□□□□□ -0.02
ERBB2-208ENST00000578630 POLD1P28340 1107 aa14.95□□□□□ -0.02
ERBB2-208ENST00000578630 SMIM5Q71RC9 77 aa14.95□□□□□ -0.02
ERBB2-208ENST00000578630 ARXQ96QS3 562 aa14.95□□□□□ -0.02
ERBB2-208ENST00000578630 PAPPAQ13219 1627 aa14.95□□□□□ -0.02
ERBB2-208ENST00000578630 C5P01031 1676 aa14.94□□□□□ -0.02
ERBB2-208ENST00000578630 EIF5P55010 431 aaKnown RBP14.94□□□□□ -0.02
ERBB2-208ENST00000578630 AMIGO3Q86WK7 504 aa14.94□□□□□ -0.02
ERBB2-208ENST00000578630 NLGN1Q8N2Q7 840 aa14.94□□□□□ -0.02
ERBB2-208ENST00000578630 ZNF330Q9Y3S2 320 aaPredicted RBP14.94□□□□□ -0.02
ERBB2-208ENST00000578630 SOS1Q07889 1333 aaPredicted RBP14.93□□□□□ -0.02
ERBB2-208ENST00000578630 HOXB7P09629 217 aa14.93□□□□□ -0.02
ERBB2-208ENST00000578630 GOLGA2Q08379 1002 aa14.93□□□□□ -0.02
ERBB2-208ENST00000578630 DUSP27Q5VZP5 1158 aa14.93□□□□□ -0.02
ERBB2-208ENST00000578630 MYH16Q9H6N6 1097 aa14.93□□□□□ -0.02
ERBB2-208ENST00000578630 TAF1LQ8IZX4 1826 aa14.93□□□□□ -0.02
ERBB2-208ENST00000578630 PPP1R1BQ9UD71 204 aaPredicted RBP14.92□□□□□ -0.02
ERBB2-208ENST00000578630 NARFQ9UHQ1 456 aa14.92□□□□□ -0.02
ERBB2-208ENST00000578630 ERBB4Q15303 1308 aa14.92□□□□□ -0.02
ERBB2-208ENST00000578630 UBR2Q8IWV8 1755 aa14.9□□□□□ -0.02
ERBB2-208ENST00000578630 ELL2O00472 640 aaPredicted RBP14.9□□□□□ -0.02
ERBB2-208ENST00000578630 KRT24Q2M2I5 525 aa14.9□□□□□ -0.02
ERBB2-208ENST00000578630 HDGFL1Q5TGJ6 251 aa14.9□□□□□ -0.02
ERBB2-208ENST00000578630 TSR2Q969E8 191 aaKnown RBP14.9□□□□□ -0.02
ERBB2-208ENST00000578630 NBPF26B4DH59 902 aa14.89□□□□□ -0.03
ERBB2-208ENST00000578630 GYS1P13807 737 aa14.89□□□□□ -0.03
ERBB2-208ENST00000578630 MYL6BP14649 208 aa14.89□□□□□ -0.03
ERBB2-208ENST00000578630 PIP4K2AP48426 406 aaPredicted RBP14.89□□□□□ -0.03
ERBB2-208ENST00000578630 USPL1Q5W0Q7 1092 aa14.89□□□□□ -0.03
ERBB2-208ENST00000578630 MSL1Q68DK7 614 aa14.89□□□□□ -0.03
ERBB2-208ENST00000578630 NBPF10Q6P3W6 841 aaKnown RBP14.89□□□□□ -0.03
ERBB2-208ENST00000578630 DZIP3Q86Y13 1208 aaKnown RBP14.89□□□□□ -0.03
ERBB2-208ENST00000578630 NBPF15Q8N660 670 aa14.89□□□□□ -0.03
ERBB2-208ENST00000578630 C8orf58Q8NAV2 365 aa14.89□□□□□ -0.03
ERBB2-208ENST00000578630 NECTIN2Q92692 538 aa14.89□□□□□ -0.03
ERBB2-208ENST00000578630 TBC1D2BQ9UPU7 963 aa14.89□□□□□ -0.03
ERBB2-208ENST00000578630 MYH14Q7Z406 1995 aaKnown RBP14.89□□□□□ -0.03
ERBB2-208ENST00000578630 USP42Q9H9J4 1324 aaKnown RBP14.89□□□□□ -0.03
ERBB2-208ENST00000578630 COL15A1P39059 1388 aa14.88□□□□□ -0.03
ERBB2-208ENST00000578630 E9PSI1 815 aa14.88□□□□□ -0.03
ERBB2-208ENST00000578630 PTGER2P43116 358 aa14.88□□□□□ -0.03
ERBB2-208ENST00000578630 CCDC30Q5VVM6 783 aa14.88□□□□□ -0.03
ERBB2-208ENST00000578630 DBF4Q9UBU7 674 aaPredicted RBP14.88□□□□□ -0.03
ERBB2-208ENST00000578630 SRP68Q9UHB9 627 aaKnown RBP14.88□□□□□ -0.03
ERBB2-208ENST00000578630 TJP1Q07157 1748 aa14.88□□□□□ -0.03
ERBB2-208ENST00000578630 ZNF521Q96K83 1311 aa14.88□□□□□ -0.03
ERBB2-208ENST00000578630 KDM3BQ7LBC6 1761 aa14.88□□□□□ -0.03
ERBB2-208ENST00000578630 COL5A3P25940 1745 aaPredicted RBP14.87□□□□□ -0.03
ERBB2-208ENST00000578630 HNRNPUQ00839 825 aaKnown RBP eCLIP14.87□□□□□ -0.03
ERBB2-208ENST00000578630 TWISTNBQ3B726 338 aaPredicted RBP14.87□□□□□ -0.03
ERBB2-208ENST00000578630 SGIP1Q9BQI5 828 aa14.87□□□□□ -0.03
ERBB2-208ENST00000578630 DDX21Q9NR30 783 aaKnown RBP eCLIP14.87□□□□□ -0.03
ERBB2-208ENST00000578630 CICQ96RK0 1608 aaPredicted RBP14.87□□□□□ -0.03
ERBB2-208ENST00000578630 QSER1Q2KHR3 1735 aa14.86□□□□□ -0.03
ERBB2-208ENST00000578630 FKBP8Q14318 412 aa14.86□□□□□ -0.03
ERBB2-208ENST00000578630 CLEC4GQ6UXB4 293 aa14.86□□□□□ -0.03
ERBB2-208ENST00000578630 KIF6Q6ZMV9 814 aa14.86□□□□□ -0.03
ERBB2-208ENST00000578630 SPINK5Q9NQ38 1064 aaPredicted RBP14.86□□□□□ -0.03
ERBB2-208ENST00000578630 ZNF652Q9Y2D9 606 aa14.86□□□□□ -0.03
ERBB2-208ENST00000578630 PARP3Q9Y6F1 533 aa14.86□□□□□ -0.03
ERBB2-208ENST00000578630 UBR3Q6ZT12 1888 aa14.86□□□□□ -0.03
ERBB2-208ENST00000578630 FANCIQ9NVI1 1328 aa14.86□□□□□ -0.03
ERBB2-208ENST00000578630 RGL2O15211 777 aa14.85□□□□□ -0.03
ERBB2-208ENST00000578630 MMP10P09238 476 aa14.85□□□□□ -0.03
ERBB2-208ENST00000578630 EXOSC9Q06265 439 aaKnown RBP14.85□□□□□ -0.03
ERBB2-208ENST00000578630 SLFN5Q08AF3 891 aa14.85□□□□□ -0.03
ERBB2-208ENST00000578630 PDIA6Q15084 440 aa14.85□□□□□ -0.03
ERBB2-208ENST00000578630 TSPYL6Q8N831 410 aa14.85□□□□□ -0.03
ERBB2-208ENST00000578630 HYPKQ9NX55 129 aa14.85□□□□□ -0.03
ERBB2-208ENST00000578630 CASZ1Q86V15 1759 aa14.84□□□□□ -0.03
ERBB2-208ENST00000578630 ERVV-1B6SEH8 477 aa14.84□□□□□ -0.03
ERBB2-208ENST00000578630 CAMTA2O94983 1202 aa14.84□□□□□ -0.03
ERBB2-208ENST00000578630 TM4SF1P30408 202 aa14.84□□□□□ -0.03
ERBB2-208ENST00000578630 COPS6Q7L5N1 327 aa14.84□□□□□ -0.03
ERBB2-208ENST00000578630 STK31Q9BXU1 1019 aa14.84□□□□□ -0.03
ERBB2-208ENST00000578630 CHPF2Q9P2E5 772 aa14.84□□□□□ -0.03
ERBB2-208ENST00000578630 VAMP4O75379 141 aa14.83□□□□□ -0.04
ERBB2-208ENST00000578630 ANXA1P04083 346 aa14.83□□□□□ -0.04
ERBB2-208ENST00000578630 AIMP1Q12904 312 aaKnown RBP14.83□□□□□ -0.04
ERBB2-208ENST00000578630 SETDB2Q96T68 719 aa14.83□□□□□ -0.04
ERBB2-208ENST00000578630 PROSER3Q2NL68 480 aa14.82□□□□□ -0.04
ERBB2-208ENST00000578630 BICDL1Q6ZP65 573 aa14.82□□□□□ -0.04
ERBB2-208ENST00000578630 TTLL7Q6ZT98 887 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms