RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 DDX21Q9NR30 783 aaKnown RBP eCLIP28.92■■■□□ 2.22
LIMD2-205ENST00000578402 HYPKQ9NX55 129 aa28.92■■■□□ 2.22
LIMD2-205ENST00000578402 ITGB4P16144 1822 aa28.92■■■□□ 2.22
LIMD2-205ENST00000578402 PRAMEF22A3QJZ6 481 aa28.91■■■□□ 2.22
LIMD2-205ENST00000578402 IGHDP01880 384 aa28.9■■■□□ 2.22
LIMD2-205ENST00000578402 HDAC1Q13547 482 aaPredicted RBP28.9■■■□□ 2.22
LIMD2-205ENST00000578402 USP21Q9UK80 565 aa28.9■■■□□ 2.22
LIMD2-205ENST00000578402 PHAXQ9H814 394 aaKnown RBP28.89■■■□□ 2.22
LIMD2-205ENST00000578402 BCL9O00512 1426 aa28.88■■■□□ 2.21
LIMD2-205ENST00000578402 ERBB4Q15303 1308 aa28.88■■■□□ 2.21
LIMD2-205ENST00000578402 F6X3S4 739 aa28.88■■■□□ 2.21
LIMD2-205ENST00000578402 MEX3CQ5U5Q3 659 aaKnown RBP28.88■■■□□ 2.21
LIMD2-205ENST00000578402 PDIA6Q15084 440 aa28.86■■■□□ 2.21
LIMD2-205ENST00000578402 PIGBQ92521 554 aa28.86■■■□□ 2.21
LIMD2-205ENST00000578402 DOT1LQ8TEK3 1739 aa28.86■■■□□ 2.21
LIMD2-205ENST00000578402 SLC4A10Q6U841 1118 aa28.85■■■□□ 2.21
LIMD2-205ENST00000578402 ATP10DQ9P241 1426 aa28.84■■■□□ 2.21
LIMD2-205ENST00000578402 PROSER3Q2NL68 480 aa28.84■■■□□ 2.21
LIMD2-205ENST00000578402 VSIG10Q8N0Z9 540 aa28.84■■■□□ 2.21
LIMD2-205ENST00000578402 USP16Q9Y5T5 823 aa28.84■■■□□ 2.21
LIMD2-205ENST00000578402 MARCH10Q8NA82 808 aaPredicted RBP28.83■■■□□ 2.21
LIMD2-205ENST00000578402 THSD7AQ9UPZ6 1657 aa28.82■■■□□ 2.2
LIMD2-205ENST00000578402 FAM98CQ17RN3 349 aaKnown RBP28.82■■■□□ 2.2
LIMD2-205ENST00000578402 POTEAQ6S8J7 498 aa28.82■■■□□ 2.2
LIMD2-205ENST00000578402 DDX58O95786 925 aaKnown RBP28.81■■■□□ 2.2
LIMD2-205ENST00000578402 ANXA1P04083 346 aa28.81■■■□□ 2.2
LIMD2-205ENST00000578402 DNAAF4Q8WXU2 420 aa28.81■■■□□ 2.2
LIMD2-205ENST00000578402 ADCY9O60503 1353 aa28.81■■■□□ 2.2
LIMD2-205ENST00000578402 ATG3Q9NT62 314 aa28.8■■■□□ 2.2
LIMD2-205ENST00000578402 AFF2P51816 1311 aa28.8■■■□□ 2.2
LIMD2-205ENST00000578402 PI4KAP2A4QPH2 592 aa28.79■■■□□ 2.2
LIMD2-205ENST00000578402 KSR2Q6VAB6 950 aa28.79■■■□□ 2.2
LIMD2-205ENST00000578402 PI4KAP1Q8N8J0 262 aa28.79■■■□□ 2.2
LIMD2-205ENST00000578402 TEX13AQ9BXU3 409 aaPredicted RBP28.79■■■□□ 2.2
LIMD2-205ENST00000578402 ATRNO75882 1429 aa28.79■■■□□ 2.2
LIMD2-205ENST00000578402 GNAI3P08754 354 aa28.78■■■□□ 2.2
LIMD2-205ENST00000578402 LRP10Q7Z4F1 713 aa28.78■■■□□ 2.2
LIMD2-205ENST00000578402 MEIS3Q99687 375 aa28.78■■■□□ 2.2
LIMD2-205ENST00000578402 ASAP1Q9ULH1 1129 aa28.78■■■□□ 2.2
LIMD2-205ENST00000578402 IBTKQ9P2D0 1353 aaPredicted RBP28.77■■■□□ 2.2
LIMD2-205ENST00000578402 PTCD1O75127 700 aaKnown RBP28.77■■■□□ 2.2
LIMD2-205ENST00000578402 SRCIN1Q9C0H9 1055 aa28.77■■■□□ 2.2
LIMD2-205ENST00000578402 PRIM1P49642 420 aaKnown RBP28.76■■■□□ 2.19
LIMD2-205ENST00000578402 RPAP2Q8IXW5 612 aaPredicted RBP28.76■■■□□ 2.19
LIMD2-205ENST00000578402 BEND3Q5T5X7 828 aa28.75■■■□□ 2.19
LIMD2-205ENST00000578402 SMC5Q8IY18 1101 aa28.75■■■□□ 2.19
LIMD2-205ENST00000578402 C1orf115Q9H7X2 142 aa28.75■■■□□ 2.19
LIMD2-205ENST00000578402 TRPC5Q9UL62 973 aaPredicted RBP28.75■■■□□ 2.19
LIMD2-205ENST00000578402 GJD4Q96KN9 370 aaPredicted RBP28.74■■■□□ 2.19
LIMD2-205ENST00000578402 MAP3K2Q9Y2U5 619 aa28.74■■■□□ 2.19
LIMD2-205ENST00000578402 ALDH1L1O75891 902 aa28.73■■■□□ 2.19
LIMD2-205ENST00000578402 MYL6BP14649 208 aa28.73■■■□□ 2.19
LIMD2-205ENST00000578402 ANKRD44Q8N8A2 993 aa28.73■■■□□ 2.19
LIMD2-205ENST00000578402 SYTL4Q96C24 671 aaPredicted RBP28.73■■■□□ 2.19
LIMD2-205ENST00000578402 GNAI2P04899 355 aa28.72■■■□□ 2.19
LIMD2-205ENST00000578402 XAGE3Q8WTP9 111 aa28.72■■■□□ 2.19
LIMD2-205ENST00000578402 GCC1Q96CN9 775 aa28.71■■■□□ 2.19
LIMD2-205ENST00000578402 ONECUT3O60422 494 aaPredicted RBP28.7■■■□□ 2.19
LIMD2-205ENST00000578402 CEP85Q6P2H3 762 aa28.7■■■□□ 2.19
LIMD2-205ENST00000578402 COPS6Q7L5N1 327 aa28.7■■■□□ 2.19
LIMD2-205ENST00000578402 SIRT2Q8IXJ6 389 aa28.7■■■□□ 2.19
LIMD2-205ENST00000578402 USP44Q9H0E7 712 aa28.7■■■□□ 2.19
LIMD2-205ENST00000578402 CICQ96RK0 1608 aaPredicted RBP28.69■■■□□ 2.18
LIMD2-205ENST00000578402 NBPF26B4DH59 902 aa28.69■■■□□ 2.18
LIMD2-205ENST00000578402 AIMP1Q12904 312 aaKnown RBP28.69■■■□□ 2.18
LIMD2-205ENST00000578402 NBPF14Q5TI25 921 aa28.69■■■□□ 2.18
LIMD2-205ENST00000578402 NBPF10Q6P3W6 841 aaKnown RBP28.69■■■□□ 2.18
LIMD2-205ENST00000578402 NBPF15Q8N660 670 aa28.69■■■□□ 2.18
LIMD2-205ENST00000578402 LINS1Q8NG48 757 aa28.69■■■□□ 2.18
LIMD2-205ENST00000578402 STARD3NLO95772 234 aa28.68■■■□□ 2.18
LIMD2-205ENST00000578402 RIC3Q7Z5B4 369 aa28.68■■■□□ 2.18
LIMD2-205ENST00000578402 ANKRD13DQ6ZTN6 518 aa28.67■■■□□ 2.18
LIMD2-205ENST00000578402 RBM42Q9BTD8 480 aaKnown RBP28.67■■■□□ 2.18
LIMD2-205ENST00000578402 PDZRN3Q9UPQ7 1066 aa28.67■■■□□ 2.18
LIMD2-205ENST00000578402 KAT6BQ8WYB5 2073 aa28.67■■■□□ 2.18
LIMD2-205ENST00000578402 UBTFL1P0CB47 393 aaPredicted RBP28.66■■■□□ 2.18
LIMD2-205ENST00000578402 TSHZ2Q9NRE2 1034 aa28.66■■■□□ 2.18
LIMD2-205ENST00000578402 TJP1Q07157 1748 aa28.65■■■□□ 2.18
LIMD2-205ENST00000578402 A0A0G2JS52 829 aa28.65■■■□□ 2.18
LIMD2-205ENST00000578402 MYT1Q01538 1121 aa28.65■■■□□ 2.18
LIMD2-205ENST00000578402 NEXNQ0ZGT2 675 aa28.65■■■□□ 2.18
LIMD2-205ENST00000578402 DNAJC10Q8IXB1 793 aa28.65■■■□□ 2.18
LIMD2-205ENST00000578402 ACSBG1Q96GR2 724 aa28.65■■■□□ 2.18
LIMD2-205ENST00000578402 METTL22Q9BUU2 404 aaPredicted RBP28.65■■■□□ 2.18
LIMD2-205ENST00000578402 HMMRO75330 724 aa28.64■■■□□ 2.18
LIMD2-205ENST00000578402 A1BGP04217 495 aa28.64■■■□□ 2.18
LIMD2-205ENST00000578402 PLBD2Q8NHP8 589 aa28.64■■■□□ 2.18
LIMD2-205ENST00000578402 SMARCC1Q92922 1105 aaPredicted RBP28.64■■■□□ 2.18
LIMD2-205ENST00000578402 HDAC5Q9UQL6 1122 aa28.64■■■□□ 2.18
LIMD2-205ENST00000578402 ARFGEF2Q9Y6D5 1785 aa28.64■■■□□ 2.18
LIMD2-205ENST00000578402 SLC4A9Q96Q91 983 aa28.63■■■□□ 2.17
LIMD2-205ENST00000578402 ZNF831Q5JPB2 1677 aa28.62■■■□□ 2.17
LIMD2-205ENST00000578402 PIP4K2AP48426 406 aaPredicted RBP28.62■■■□□ 2.17
LIMD2-205ENST00000578402 SKAP1Q86WV1 359 aa28.62■■■□□ 2.17
LIMD2-205ENST00000578402 DCTPP1Q9H773 170 aa28.62■■■□□ 2.17
LIMD2-205ENST00000578402 NUCB1Q02818 461 aa28.61■■■□□ 2.17
LIMD2-205ENST00000578402 UTYO14607 1347 aa28.61■■■□□ 2.17
LIMD2-205ENST00000578402 NHSQ6T4R5 1651 aa28.61■■■□□ 2.17
LIMD2-205ENST00000578402 NUP188Q5SRE5 1749 aa28.61■■■□□ 2.17
LIMD2-205ENST00000578402 CYP19A1P11511 503 aaPredicted RBP28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms