RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 SPATA31A1Q5TZJ5 1347 aa10.52□□□□□ -0.73
COPS3-215ENST00000578317 SPATA31A5Q5VU36 1347 aa10.52□□□□□ -0.73
COPS3-215ENST00000578317 SPATA31A7Q8IWB4 1347 aa10.52□□□□□ -0.73
COPS3-215ENST00000578317 HTATSF1O43719 755 aaKnown RBP10.51□□□□□ -0.73
COPS3-215ENST00000578317 TATP17735 454 aaPredicted RBP10.51□□□□□ -0.73
COPS3-215ENST00000578317 PDE4DQ08499 809 aa10.51□□□□□ -0.73
COPS3-215ENST00000578317 MTHFSDQ2M296 383 aaKnown RBP10.51□□□□□ -0.73
COPS3-215ENST00000578317 MAMSTRQ6ZN01 415 aa10.51□□□□□ -0.73
COPS3-215ENST00000578317 CDCA7Q9BWT1 371 aaPredicted RBP10.51□□□□□ -0.73
COPS3-215ENST00000578317 ZNF521Q96K83 1311 aa10.51□□□□□ -0.73
COPS3-215ENST00000578317 IL2RBP14784 551 aa10.51□□□□□ -0.73
COPS3-215ENST00000578317 RIPK4P57078 832 aa10.51□□□□□ -0.73
COPS3-215ENST00000578317 WWC1Q8IX03 1113 aa10.51□□□□□ -0.73
COPS3-215ENST00000578317 OTUD5Q96G74 571 aa10.51□□□□□ -0.73
COPS3-215ENST00000578317 GPR37O15354 613 aa10.5□□□□□ -0.73
COPS3-215ENST00000578317 LMOD3Q0VAK6 560 aa10.5□□□□□ -0.73
COPS3-215ENST00000578317 PDE3BQ13370 1112 aa10.5□□□□□ -0.73
COPS3-215ENST00000578317 WDR63Q8IWG1 891 aa10.5□□□□□ -0.73
COPS3-215ENST00000578317 IL27Q8NEV9 243 aa10.5□□□□□ -0.73
COPS3-215ENST00000578317 YTHDC1Q96MU7 727 aaKnown RBP10.5□□□□□ -0.73
COPS3-215ENST00000578317 SPG7Q9UQ90 795 aa10.5□□□□□ -0.73
COPS3-215ENST00000578317 AFF2P51816 1311 aa10.49□□□□□ -0.73
COPS3-215ENST00000578317 PLCH1Q4KWH8 1693 aa10.49□□□□□ -0.73
COPS3-215ENST00000578317 ONECUT3O60422 494 aaPredicted RBP10.49□□□□□ -0.73
COPS3-215ENST00000578317 EVI5O60447 810 aa10.49□□□□□ -0.73
COPS3-215ENST00000578317 TRPC5Q9UL62 973 aaPredicted RBP10.49□□□□□ -0.73
COPS3-215ENST00000578317 AKAP4Q5JQC9 854 aa10.48□□□□□ -0.73
COPS3-215ENST00000578317 ZCRB1Q8TBF4 217 aaKnown RBP10.48□□□□□ -0.73
COPS3-215ENST00000578317 GJD4Q96KN9 370 aaPredicted RBP10.48□□□□□ -0.73
COPS3-215ENST00000578317 RGS17Q9UGC6 210 aaPredicted RBP10.48□□□□□ -0.73
COPS3-215ENST00000578317 PCDHGA4Q9Y5G9 962 aa10.48□□□□□ -0.73
COPS3-215ENST00000578317 GNAT3A8MTJ3 354 aa10.47□□□□□ -0.73
COPS3-215ENST00000578317 ZNF772Q68DY9 489 aaPredicted RBP10.47□□□□□ -0.73
COPS3-215ENST00000578317 USP35Q9P2H5 1018 aa10.47□□□□□ -0.73
COPS3-215ENST00000578317 RRP7AQ9Y3A4 280 aaKnown RBP10.47□□□□□ -0.73
COPS3-215ENST00000578317 OVOS2A0A0G2JMS6 1433 aa10.47□□□□□ -0.73
COPS3-215ENST00000578317 NRAPQ86VF7 1730 aa10.47□□□□□ -0.73
COPS3-215ENST00000578317 IL16Q14005 1332 aa10.47□□□□□ -0.73
COPS3-215ENST00000578317 DISP2A7MBM2 1401 aa10.47□□□□□ -0.73
COPS3-215ENST00000578317 GRXCR2A6NFK2 248 aa10.47□□□□□ -0.73
COPS3-215ENST00000578317 EXOC5O00471 708 aa10.47□□□□□ -0.73
COPS3-215ENST00000578317 PTGER2P43116 358 aa10.47□□□□□ -0.73
COPS3-215ENST00000578317 CALD1Q05682 793 aaKnown RBP10.47□□□□□ -0.73
COPS3-215ENST00000578317 HOMEZQ8IX15 550 aa10.47□□□□□ -0.73
COPS3-215ENST00000578317 IFNL2Q8IZJ0 200 aa10.47□□□□□ -0.73
COPS3-215ENST00000578317 QTRT2Q9H974 415 aaKnown RBP10.47□□□□□ -0.73
COPS3-215ENST00000578317 SALL2Q9Y467 1007 aaPredicted RBP10.47□□□□□ -0.73
COPS3-215ENST00000578317 NWD2Q9ULI1 1742 aa10.46□□□□□ -0.73
COPS3-215ENST00000578317 HSP90AB1P08238 724 aaKnown RBP10.46□□□□□ -0.74
COPS3-215ENST00000578317 ZNF530Q6P9A1 599 aaPredicted RBP10.46□□□□□ -0.74
COPS3-215ENST00000578317 TRMT2AQ8IZ69 625 aaKnown RBP10.46□□□□□ -0.74
COPS3-215ENST00000578317 RTF1Q92541 710 aaKnown RBP10.46□□□□□ -0.74
COPS3-215ENST00000578317 ANO8Q9HCE9 1232 aaPredicted RBP10.46□□□□□ -0.74
COPS3-215ENST00000578317 CCDC9Q9Y3X0 531 aaKnown RBP10.46□□□□□ -0.74
COPS3-215ENST00000578317 FAM208AQ9UK61 1670 aaKnown RBP10.46□□□□□ -0.74
COPS3-215ENST00000578317 MEGF6O75095 1541 aa10.46□□□□□ -0.74
COPS3-215ENST00000578317 ATRNO75882 1429 aa10.45□□□□□ -0.74
COPS3-215ENST00000578317 CYP27B1O15528 508 aa10.45□□□□□ -0.74
COPS3-215ENST00000578317 TBC1D12O60347 775 aa10.45□□□□□ -0.74
COPS3-215ENST00000578317 PHKG2P15735 406 aa10.45□□□□□ -0.74
COPS3-215ENST00000578317 C1orf141Q5JVX7 400 aa10.45□□□□□ -0.74
COPS3-215ENST00000578317 IL17REQ8NFR9 667 aa10.45□□□□□ -0.74
COPS3-215ENST00000578317 RGPD5Q99666 1765 aa10.45□□□□□ -0.74
COPS3-215ENST00000578317 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.44□□□□□ -0.74
COPS3-215ENST00000578317 E9PSI1 815 aa10.44□□□□□ -0.74
COPS3-215ENST00000578317 SLFN5Q08AF3 891 aa10.44□□□□□ -0.74
COPS3-215ENST00000578317 LHX8Q68G74 356 aa10.44□□□□□ -0.74
COPS3-215ENST00000578317 BABAM1Q9NWV8 329 aa10.44□□□□□ -0.74
COPS3-215ENST00000578317 PCDH11XQ9BZA7 1347 aa10.44□□□□□ -0.74
COPS3-215ENST00000578317 PCDH11YQ9BZA8 1340 aa10.44□□□□□ -0.74
COPS3-215ENST00000578317 MAP3K5Q99683 1374 aa10.44□□□□□ -0.74
COPS3-215ENST00000578317 SENP3-EIF4A1A0A087X0R7 540 aa10.44□□□□□ -0.74
COPS3-215ENST00000578317 ZNF853P0CG23 659 aa10.44□□□□□ -0.74
COPS3-215ENST00000578317 MAP2K5Q13163 448 aa10.44□□□□□ -0.74
COPS3-215ENST00000578317 DDX12PQ92771 950 aa10.44□□□□□ -0.74
COPS3-215ENST00000578317 KHSRPQ92945 711 aaKnown RBP eCLIP10.44□□□□□ -0.743e-8■■■■■ 29
COPS3-215ENST00000578317 DCAF5Q96JK2 942 aa10.44□□□□□ -0.74
COPS3-215ENST00000578317 CEMIPQ8WUJ3 1361 aa10.43□□□□□ -0.74
COPS3-215ENST00000578317 PRIM1P49642 420 aaKnown RBP10.43□□□□□ -0.74
COPS3-215ENST00000578317 DDB1Q16531 1140 aa10.43□□□□□ -0.74
COPS3-215ENST00000578317 FAM98CQ17RN3 349 aaKnown RBP10.43□□□□□ -0.74
COPS3-215ENST00000578317 RNMTO43148 476 aaKnown RBP10.42□□□□□ -0.74
COPS3-215ENST00000578317 OSBPP22059 807 aa10.42□□□□□ -0.74
COPS3-215ENST00000578317 RBM6P78332 1123 aaKnown RBP10.42□□□□□ -0.74
COPS3-215ENST00000578317 DCTN1Q14203 1278 aa10.42□□□□□ -0.74
COPS3-215ENST00000578317 DOK7Q18PE1 504 aa10.42□□□□□ -0.74
COPS3-215ENST00000578317 POTEAQ6S8J7 498 aa10.42□□□□□ -0.74
COPS3-215ENST00000578317 MCM10Q7L590 875 aa10.42□□□□□ -0.74
COPS3-215ENST00000578317 LGR6Q9HBX8 967 aa10.42□□□□□ -0.74
COPS3-215ENST00000578317 IFT57Q9NWB7 429 aa10.42□□□□□ -0.74
COPS3-215ENST00000578317 ERVV-2B6SEH9 535 aa10.41□□□□□ -0.74
COPS3-215ENST00000578317 CHL1O00533 1208 aa10.41□□□□□ -0.74
COPS3-215ENST00000578317 GNAI1P63096 354 aa10.41□□□□□ -0.74
COPS3-215ENST00000578317 TAF7Q15545 349 aaPredicted RBP10.41□□□□□ -0.74
COPS3-215ENST00000578317 GPR153Q6NV75 609 aa10.41□□□□□ -0.74
COPS3-215ENST00000578317 MPRIPQ6WCQ1 1025 aa10.41□□□□□ -0.74
COPS3-215ENST00000578317 DDX54Q8TDD1 881 aaKnown RBP10.41□□□□□ -0.74
COPS3-215ENST00000578317 CDCA7LQ96GN5 454 aa10.41□□□□□ -0.74
COPS3-215ENST00000578317 MYH16Q9H6N6 1097 aa10.41□□□□□ -0.74
COPS3-215ENST00000578317 GLI3P10071 1580 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms