RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 STARD3NLO95772 234 aa14.47□□□□□ -0.09
PPP4R1-208ENST00000578178 LAMB4A4D0S4 1761 aa14.47□□□□□ -0.09
PPP4R1-208ENST00000578178 TEX13AQ9BXU3 409 aaPredicted RBP14.46□□□□□ -0.09
PPP4R1-208ENST00000578178 SRP68Q9UHB9 627 aaKnown RBP14.46□□□□□ -0.09
PPP4R1-208ENST00000578178 C10orf71Q711Q0 1435 aa14.46□□□□□ -0.09
PPP4R1-208ENST00000578178 CHD4Q14839 1912 aa14.46□□□□□ -0.09
PPP4R1-208ENST00000578178 KCNQ3O43525 872 aa14.45□□□□□ -0.1
PPP4R1-208ENST00000578178 KIAA1551Q9HCM1 1747 aa14.45□□□□□ -0.1
PPP4R1-208ENST00000578178 WDR43Q15061 677 aaKnown RBP eCLIP14.44□□□□□ -0.1
PPP4R1-208ENST00000578178 BCORQ6W2J9 1755 aa14.43□□□□□ -0.1
PPP4R1-208ENST00000578178 ZNF316A6NFI3 1004 aaPredicted RBP14.43□□□□□ -0.1
PPP4R1-208ENST00000578178 ZPR1O75312 459 aa14.43□□□□□ -0.1
PPP4R1-208ENST00000578178 CANXP27824 592 aaKnown RBP14.43□□□□□ -0.1
PPP4R1-208ENST00000578178 FKBP8Q14318 412 aa14.43□□□□□ -0.1
PPP4R1-208ENST00000578178 TAF7Q15545 349 aaPredicted RBP14.43□□□□□ -0.1
PPP4R1-208ENST00000578178 GPR162Q16538 588 aa14.43□□□□□ -0.1
PPP4R1-208ENST00000578178 PELP1Q8IZL8 1130 aaKnown RBP14.43□□□□□ -0.1
PPP4R1-208ENST00000578178 PARP3Q9Y6F1 533 aa14.43□□□□□ -0.1
PPP4R1-208ENST00000578178 YY1P25490 414 aa14.42□□□□□ -0.1
PPP4R1-208ENST00000578178 EIF5P55010 431 aaKnown RBP14.42□□□□□ -0.1
PPP4R1-208ENST00000578178 USPL1Q5W0Q7 1092 aa14.42□□□□□ -0.1
PPP4R1-208ENST00000578178 PNISRQ8TF01 805 aaKnown RBP14.42□□□□□ -0.1
PPP4R1-208ENST00000578178 NARFQ9UHQ1 456 aa14.42□□□□□ -0.1
PPP4R1-208ENST00000578178 PXDNLA1KZ92 1463 aa14.42□□□□□ -0.1
PPP4R1-208ENST00000578178 SNRPA1P09661 255 aaKnown RBP14.41□□□□□ -0.1
PPP4R1-208ENST00000578178 LMOD3Q0VAK6 560 aa14.41□□□□□ -0.1
PPP4R1-208ENST00000578178 THUMPD2Q9BTF0 503 aaKnown RBP14.41□□□□□ -0.1
PPP4R1-208ENST00000578178 N4BP2Q86UW6 1770 aaPredicted RBP14.41□□□□□ -0.1
PPP4R1-208ENST00000578178 UTRNP46939 3433 aa14.41□□□□□ -0.1
PPP4R1-208ENST00000578178 NRXN2Q9P2S2 1712 aa14.41□□□□□ -0.1
PPP4R1-208ENST00000578178 A0A087WZG4 1122 aa14.4□□□□□ -0.1
PPP4R1-208ENST00000578178 IL6STP40189 918 aaPredicted RBP14.4□□□□□ -0.1
PPP4R1-208ENST00000578178 TMPOP42166 694 aaKnown RBP14.4□□□□□ -0.1
PPP4R1-208ENST00000578178 RIPK4P57078 832 aa14.4□□□□□ -0.1
PPP4R1-208ENST00000578178 DDR1Q08345 913 aa14.4□□□□□ -0.1
PPP4R1-208ENST00000578178 CCDC146Q8IYE0 955 aa14.4□□□□□ -0.1
PPP4R1-208ENST00000578178 AFDNP55196 1824 aaKnown RBP14.4□□□□□ -0.1
PPP4R1-208ENST00000578178 BRCA1P38398 1863 aaKnown RBP14.4□□□□□ -0.1
PPP4R1-208ENST00000578178 PRAMEF22A3QJZ6 481 aa14.39□□□□□ -0.11
PPP4R1-208ENST00000578178 A1BGP04217 495 aa14.39□□□□□ -0.11
PPP4R1-208ENST00000578178 YBX3P16989 372 aaKnown RBP eCLIP14.39□□□□□ -0.11
PPP4R1-208ENST00000578178 RUNDC1Q96C34 613 aa14.39□□□□□ -0.11
PPP4R1-208ENST00000578178 MIS18AQ9NYP9 233 aa14.39□□□□□ -0.11
PPP4R1-208ENST00000578178 ZNF330Q9Y3S2 320 aaPredicted RBP14.39□□□□□ -0.11
PPP4R1-208ENST00000578178 USP16Q9Y5T5 823 aa14.39□□□□□ -0.11
PPP4R1-208ENST00000578178 GOLGB1Q14789 3259 aaKnown RBP14.38□□□□□ -0.11
PPP4R1-208ENST00000578178 POLRMTO00411 1230 aaKnown RBP14.38□□□□□ -0.11
PPP4R1-208ENST00000578178 GRIN3BO60391 1043 aa14.38□□□□□ -0.11
PPP4R1-208ENST00000578178 NPM2Q86SE8 214 aaKnown RBP14.38□□□□□ -0.11
PPP4R1-208ENST00000578178 BCL2L12Q9HB09 334 aa14.38□□□□□ -0.11
PPP4R1-208ENST00000578178 ADAMTS8Q9UP79 889 aa14.38□□□□□ -0.11
PPP4R1-208ENST00000578178 TM4SF1P30408 202 aa14.37□□□□□ -0.11
PPP4R1-208ENST00000578178 TGFB2P61812 414 aa14.37□□□□□ -0.11
PPP4R1-208ENST00000578178 NFIXQ14938 502 aa14.37□□□□□ -0.11
PPP4R1-208ENST00000578178 RRP7AQ9Y3A4 280 aaKnown RBP14.37□□□□□ -0.11
PPP4R1-208ENST00000578178 EIF4A1P60842 406 aaKnown RBP14.36□□□□□ -0.11
PPP4R1-208ENST00000578178 TSPYL4Q9UJ04 414 aa14.36□□□□□ -0.11
PPP4R1-208ENST00000578178 GIGYF1O75420 1035 aaPredicted RBP14.35□□□□□ -0.11
PPP4R1-208ENST00000578178 PIP4K2AP48426 406 aaPredicted RBP14.35□□□□□ -0.11
PPP4R1-208ENST00000578178 NEUROD2Q15784 382 aa14.35□□□□□ -0.11
PPP4R1-208ENST00000578178 DZIP3Q86Y13 1208 aaKnown RBP14.35□□□□□ -0.11
PPP4R1-208ENST00000578178 WWC3Q9ULE0 1092 aa14.35□□□□□ -0.11
PPP4R1-208ENST00000578178 TBC1D2BQ9UPU7 963 aa14.35□□□□□ -0.11
PPP4R1-208ENST00000578178 DLEC1Q9Y238 1755 aa14.34□□□□□ -0.11
PPP4R1-208ENST00000578178 ARFGEF1Q9Y6D6 1849 aa14.34□□□□□ -0.11
PPP4R1-208ENST00000578178 CAMTA2O94983 1202 aa14.34□□□□□ -0.11
PPP4R1-208ENST00000578178 BABAM1Q9NWV8 329 aa14.34□□□□□ -0.11
PPP4R1-208ENST00000578178 CARMIL3Q8ND23 1372 aa14.34□□□□□ -0.11
PPP4R1-208ENST00000578178 NBPF26B4DH59 902 aa14.33□□□□□ -0.12
PPP4R1-208ENST00000578178 ANP32CO43423 234 aa14.33□□□□□ -0.12
PPP4R1-208ENST00000578178 DPEP1P16444 411 aa14.33□□□□□ -0.12
PPP4R1-208ENST00000578178 TBC1D9BQ66K14 1250 aa14.33□□□□□ -0.12
PPP4R1-208ENST00000578178 NBPF10Q6P3W6 841 aaKnown RBP14.33□□□□□ -0.12
PPP4R1-208ENST00000578178 NBPF15Q8N660 670 aa14.33□□□□□ -0.12
PPP4R1-208ENST00000578178 TRIM35Q9UPQ4 493 aa14.33□□□□□ -0.12
PPP4R1-208ENST00000578178 ANKRD31Q8N7Z5 1873 aa14.32□□□□□ -0.12
PPP4R1-208ENST00000578178 A0A0G2JLW4 131 aa14.32□□□□□ -0.12
PPP4R1-208ENST00000578178 SERPINB2P05120 415 aa14.32□□□□□ -0.12
PPP4R1-208ENST00000578178 BICDL1Q6ZP65 573 aa14.32□□□□□ -0.12
PPP4R1-208ENST00000578178 RGL2O15211 777 aa14.31□□□□□ -0.12
PPP4R1-208ENST00000578178 CCDC184Q52MB2 194 aa14.31□□□□□ -0.12
PPP4R1-208ENST00000578178 ZNF652Q9Y2D9 606 aa14.31□□□□□ -0.12
PPP4R1-208ENST00000578178 ERBB4Q15303 1308 aa14.31□□□□□ -0.12
PPP4R1-208ENST00000578178 COL11A2P13942 1736 aaPredicted RBP14.3□□□□□ -0.12
PPP4R1-208ENST00000578178 BCS1LQ9Y276 419 aa14.3□□□□□ -0.12
PPP4R1-208ENST00000578178 APAF1O14727 1248 aa14.29□□□□□ -0.12
PPP4R1-208ENST00000578178 KCNA3P22001 575 aa14.29□□□□□ -0.12
PPP4R1-208ENST00000578178 CLEC4GQ6UXB4 293 aa14.29□□□□□ -0.12
PPP4R1-208ENST00000578178 SETDB2Q96T68 719 aa14.29□□□□□ -0.12
PPP4R1-208ENST00000578178 CHL1O00533 1208 aa14.28□□□□□ -0.12
PPP4R1-208ENST00000578178 CHRNA5P30532 468 aa14.28□□□□□ -0.12
PPP4R1-208ENST00000578178 NUP98P52948 1817 aa14.28□□□□□ -0.12
PPP4R1-208ENST00000578178 ZNF784Q8NCA9 323 aaPredicted RBP14.28□□□□□ -0.12
PPP4R1-208ENST00000578178 MRS2Q9HD23 443 aa14.28□□□□□ -0.12
PPP4R1-208ENST00000578178 PIM2Q9P1W9 311 aa14.28□□□□□ -0.12
PPP4R1-208ENST00000578178 ADCY9O60503 1353 aa14.27□□□□□ -0.12
PPP4R1-208ENST00000578178 PRR5LQ6MZQ0 368 aa14.27□□□□□ -0.13
PPP4R1-208ENST00000578178 CNBD1Q8NA66 436 aa14.27□□□□□ -0.13
PPP4R1-208ENST00000578178 LAS1LQ9Y4W2 734 aaKnown RBP14.27□□□□□ -0.13
PPP4R1-208ENST00000578178 ATP10DQ9P241 1426 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms