RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 DOT1LQ8TEK3 1739 aa23.52■■□□□ 1.36
PRKCA-203ENST00000578063 LAMB4A4D0S4 1761 aa23.51■■□□□ 1.35
PRKCA-203ENST00000578063 ITGB4P16144 1822 aa23.51■■□□□ 1.35
PRKCA-203ENST00000578063 PXDNLA1KZ92 1463 aa23.5■■□□□ 1.35
PRKCA-203ENST00000578063 DDX21Q9NR30 783 aaKnown RBP eCLIP23.5■■□□□ 1.35
PRKCA-203ENST00000578063 HYPKQ9NX55 129 aa23.5■■□□□ 1.35
PRKCA-203ENST00000578063 CCT4P50991 539 aaKnown RBP23.48■■□□□ 1.35
PRKCA-203ENST00000578063 FBXO41Q8TF61 875 aa23.48■■□□□ 1.35
PRKCA-203ENST00000578063 PHAXQ9H814 394 aaKnown RBP23.48■■□□□ 1.35
PRKCA-203ENST00000578063 ZBTB40Q9NUA8 1239 aa23.48■■□□□ 1.35
PRKCA-203ENST00000578063 ERBB4Q15303 1308 aa23.48■■□□□ 1.35
PRKCA-203ENST00000578063 ZBTB7BO15156 539 aaPredicted RBP23.47■■□□□ 1.35
PRKCA-203ENST00000578063 PRIM1P49642 420 aaKnown RBP23.47■■□□□ 1.35
PRKCA-203ENST00000578063 VSIG10Q8N0Z9 540 aa23.47■■□□□ 1.35
PRKCA-203ENST00000578063 SYTL4Q96C24 671 aaPredicted RBP23.47■■□□□ 1.35
PRKCA-203ENST00000578063 ATG3Q9NT62 314 aa23.47■■□□□ 1.35
PRKCA-203ENST00000578063 CENPQQ7L2Z9 268 aaPredicted RBP23.46■■□□□ 1.35
PRKCA-203ENST00000578063 ASAP1Q9ULH1 1129 aa23.46■■□□□ 1.35
PRKCA-203ENST00000578063 USP16Q9Y5T5 823 aa23.46■■□□□ 1.35
PRKCA-203ENST00000578063 KDM2BQ8NHM5 1336 aa23.46■■□□□ 1.35
PRKCA-203ENST00000578063 F6X3S4 739 aa23.45■■□□□ 1.34
PRKCA-203ENST00000578063 PTCD1O75127 700 aaKnown RBP23.45■■□□□ 1.34
PRKCA-203ENST00000578063 PDIA6Q15084 440 aa23.45■■□□□ 1.34
PRKCA-203ENST00000578063 ONECUT3O60422 494 aaPredicted RBP23.45■■□□□ 1.34
PRKCA-203ENST00000578063 ANXA1P04083 346 aa23.45■■□□□ 1.34
PRKCA-203ENST00000578063 PROSER3Q2NL68 480 aa23.45■■□□□ 1.34
PRKCA-203ENST00000578063 QTRT2Q9H974 415 aaKnown RBP23.45■■□□□ 1.34
PRKCA-203ENST00000578063 SLC4A10Q6U841 1118 aa23.44■■□□□ 1.34
PRKCA-203ENST00000578063 PCDHB15Q9Y5E8 787 aa23.44■■□□□ 1.34
PRKCA-203ENST00000578063 TEX13AQ9BXU3 409 aaPredicted RBP23.43■■□□□ 1.34
PRKCA-203ENST00000578063 N4BP2Q86UW6 1770 aaPredicted RBP23.43■■□□□ 1.34
PRKCA-203ENST00000578063 DDX58O95786 925 aaKnown RBP23.42■■□□□ 1.34
PRKCA-203ENST00000578063 ACSBG1Q96GR2 724 aa23.41■■□□□ 1.34
PRKCA-203ENST00000578063 DNAAF4Q8WXU2 420 aa23.4■■□□□ 1.34
PRKCA-203ENST00000578063 ADCY9O60503 1353 aa23.4■■□□□ 1.34
PRKCA-203ENST00000578063 ATP10DQ9P241 1426 aa23.4■■□□□ 1.34
PRKCA-203ENST00000578063 PI4KAP2A4QPH2 592 aa23.39■■□□□ 1.34
PRKCA-203ENST00000578063 PI4KAP1Q8N8J0 262 aa23.39■■□□□ 1.34
PRKCA-203ENST00000578063 RWDD1Q9H446 243 aaPredicted RBP23.39■■□□□ 1.34
PRKCA-203ENST00000578063 MYL6BP14649 208 aa23.39■■□□□ 1.33
PRKCA-203ENST00000578063 ZNF772Q68DY9 489 aaPredicted RBP23.39■■□□□ 1.33
PRKCA-203ENST00000578063 KSR2Q6VAB6 950 aa23.39■■□□□ 1.33
PRKCA-203ENST00000578063 LRP10Q7Z4F1 713 aa23.39■■□□□ 1.33
PRKCA-203ENST00000578063 RBM42Q9BTD8 480 aaKnown RBP23.39■■□□□ 1.33
PRKCA-203ENST00000578063 SEPT12Q8IYM1 358 aa23.37■■□□□ 1.33
PRKCA-203ENST00000578063 STARD3NLO95772 234 aa23.36■■□□□ 1.33
PRKCA-203ENST00000578063 IGHDP01880 384 aa23.36■■□□□ 1.33
PRKCA-203ENST00000578063 HDAC1Q13547 482 aaPredicted RBP23.36■■□□□ 1.33
PRKCA-203ENST00000578063 SMARCC1Q92922 1105 aaPredicted RBP23.36■■□□□ 1.33
PRKCA-203ENST00000578063 XAGE3Q8WTP9 111 aa23.36■■□□□ 1.33
PRKCA-203ENST00000578063 SRCIN1Q9C0H9 1055 aa23.36■■□□□ 1.33
PRKCA-203ENST00000578063 MAP3K2Q9Y2U5 619 aa23.36■■□□□ 1.33
PRKCA-203ENST00000578063 AIMP1Q12904 312 aaKnown RBP23.35■■□□□ 1.33
PRKCA-203ENST00000578063 COPS6Q7L5N1 327 aa23.35■■□□□ 1.33
PRKCA-203ENST00000578063 DNAJC10Q8IXB1 793 aa23.35■■□□□ 1.33
PRKCA-203ENST00000578063 MEIS3Q99687 375 aa23.35■■□□□ 1.33
PRKCA-203ENST00000578063 NBPF26B4DH59 902 aa23.34■■□□□ 1.33
PRKCA-203ENST00000578063 BEND3Q5T5X7 828 aa23.34■■□□□ 1.33
PRKCA-203ENST00000578063 NBPF14Q5TI25 921 aa23.34■■□□□ 1.33
PRKCA-203ENST00000578063 NBPF10Q6P3W6 841 aaKnown RBP23.34■■□□□ 1.33
PRKCA-203ENST00000578063 NBPF15Q8N660 670 aa23.34■■□□□ 1.33
PRKCA-203ENST00000578063 KAT6BQ8WYB5 2073 aa23.34■■□□□ 1.33
PRKCA-203ENST00000578063 GNAI3P08754 354 aa23.33■■□□□ 1.33
PRKCA-203ENST00000578063 PALLDQ8WX93 1383 aa23.33■■□□□ 1.33
PRKCA-203ENST00000578063 KCNQ2O43526 872 aa23.33■■□□□ 1.32
PRKCA-203ENST00000578063 A1BGP04217 495 aa23.33■■□□□ 1.32
PRKCA-203ENST00000578063 SLC4A9Q96Q91 983 aa23.33■■□□□ 1.32
PRKCA-203ENST00000578063 C1orf115Q9H7X2 142 aa23.33■■□□□ 1.32
PRKCA-203ENST00000578063 NHSQ6T4R5 1651 aa23.33■■□□□ 1.32
PRKCA-203ENST00000578063 CICQ96RK0 1608 aaPredicted RBP23.32■■□□□ 1.32
PRKCA-203ENST00000578063 PIP4K2AP48426 406 aaPredicted RBP23.32■■□□□ 1.32
PRKCA-203ENST00000578063 RIC3Q7Z5B4 369 aa23.32■■□□□ 1.32
PRKCA-203ENST00000578063 TJP1Q07157 1748 aa23.32■■□□□ 1.32
PRKCA-203ENST00000578063 ALDH1L1O75891 902 aa23.31■■□□□ 1.32
PRKCA-203ENST00000578063 IBTKQ9P2D0 1353 aaPredicted RBP23.31■■□□□ 1.32
PRKCA-203ENST00000578063 ANKRD13DQ6ZTN6 518 aa23.3■■□□□ 1.32
PRKCA-203ENST00000578063 RBM6P78332 1123 aaKnown RBP23.3■■□□□ 1.32
PRKCA-203ENST00000578063 LINS1Q8NG48 757 aa23.3■■□□□ 1.32
PRKCA-203ENST00000578063 LOC102724428A0A0B4J2F2 783 aa23.29■■□□□ 1.32
PRKCA-203ENST00000578063 CYP19A1P11511 503 aaPredicted RBP23.29■■□□□ 1.32
PRKCA-203ENST00000578063 SIK1P57059 783 aa23.29■■□□□ 1.32
PRKCA-203ENST00000578063 NEXNQ0ZGT2 675 aa23.29■■□□□ 1.32
PRKCA-203ENST00000578063 RPAP2Q8IXW5 612 aaPredicted RBP23.29■■□□□ 1.32
PRKCA-203ENST00000578063 PLBD2Q8NHP8 589 aa23.29■■□□□ 1.32
PRKCA-203ENST00000578063 GNAI2P04899 355 aa23.28■■□□□ 1.32
PRKCA-203ENST00000578063 METTL22Q9BUU2 404 aaPredicted RBP23.28■■□□□ 1.32
PRKCA-203ENST00000578063 ZNF831Q5JPB2 1677 aa23.28■■□□□ 1.32
PRKCA-203ENST00000578063 USP44Q9H0E7 712 aa23.28■■□□□ 1.32
PRKCA-203ENST00000578063 UBTFL1P0CB47 393 aaPredicted RBP23.27■■□□□ 1.32
PRKCA-203ENST00000578063 FAM182BQ5T319 152 aa23.27■■□□□ 1.32
PRKCA-203ENST00000578063 ANKRD44Q8N8A2 993 aa23.27■■□□□ 1.32
PRKCA-203ENST00000578063 ATP6V1AP38606 617 aa23.26■■□□□ 1.31
PRKCA-203ENST00000578063 CEP85Q6P2H3 762 aa23.25■■□□□ 1.31
PRKCA-203ENST00000578063 KRT27Q7Z3Y8 459 aa23.25■■□□□ 1.31
PRKCA-203ENST00000578063 SIRT2Q8IXJ6 389 aa23.25■■□□□ 1.31
PRKCA-203ENST00000578063 SMC5Q8IY18 1101 aa23.25■■□□□ 1.31
PRKCA-203ENST00000578063 ARFGEF2Q9Y6D5 1785 aa23.24■■□□□ 1.31
PRKCA-203ENST00000578063 HDAC5Q9UQL6 1122 aa23.24■■□□□ 1.31
PRKCA-203ENST00000578063 BTAF1O14981 1849 aa23.24■■□□□ 1.31
PRKCA-203ENST00000578063 TTLL7Q6ZT98 887 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms