RNA–Protein interactions for RNA: ENST00000577543.5

TGIF1-222, Transcript of TGFB induced factor homeobox 1, humanhuman

TSL 3 BASIC

Gene TGIF1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGIF1-222ENST00000577543 USP42Q9H9J4 1324 aaKnown RBP25.43■■□□□ 1.66
TGIF1-222ENST00000577543 KCNQ3O43525 872 aa25.43■■□□□ 1.66
TGIF1-222ENST00000577543 STARD3NLO95772 234 aa25.43■■□□□ 1.66
TGIF1-222ENST00000577543 NLGN2Q8NFZ4 835 aa25.43■■□□□ 1.66
TGIF1-222ENST00000577543 BCORQ6W2J9 1755 aa25.42■■□□□ 1.66
TGIF1-222ENST00000577543 MMP10P09238 476 aa25.42■■□□□ 1.66
TGIF1-222ENST00000577543 GYS1P13807 737 aa25.42■■□□□ 1.66
TGIF1-222ENST00000577543 CCDC146Q8IYE0 955 aa25.41■■□□□ 1.66
TGIF1-222ENST00000577543 NLGN1Q8N2Q7 840 aa25.41■■□□□ 1.66
TGIF1-222ENST00000577543 TEX13AQ9BXU3 409 aaPredicted RBP25.41■■□□□ 1.66
TGIF1-222ENST00000577543 KIAA1551Q9HCM1 1747 aa25.4■■□□□ 1.66
TGIF1-222ENST00000577543 SRP68Q9UHB9 627 aaKnown RBP25.4■■□□□ 1.66
TGIF1-222ENST00000577543 AFDNP55196 1824 aaKnown RBP25.4■■□□□ 1.66
TGIF1-222ENST00000577543 N4BP2Q86UW6 1770 aaPredicted RBP25.39■■□□□ 1.66
TGIF1-222ENST00000577543 TAF7Q15545 349 aaPredicted RBP25.39■■□□□ 1.66
TGIF1-222ENST00000577543 THUMPD2Q9BTF0 503 aaKnown RBP25.39■■□□□ 1.66
TGIF1-222ENST00000577543 CD2APQ9Y5K6 639 aa25.39■■□□□ 1.66
TGIF1-222ENST00000577543 CANXP27824 592 aaKnown RBP25.38■■□□□ 1.65
TGIF1-222ENST00000577543 ZPR1O75312 459 aa25.37■■□□□ 1.65
TGIF1-222ENST00000577543 RIPK4P57078 832 aa25.37■■□□□ 1.65
TGIF1-222ENST00000577543 C10orf71Q711Q0 1435 aa25.37■■□□□ 1.65
TGIF1-222ENST00000577543 TMPOP42166 694 aaKnown RBP25.36■■□□□ 1.65
TGIF1-222ENST00000577543 LMOD3Q0VAK6 560 aa25.36■■□□□ 1.65
TGIF1-222ENST00000577543 ADAMTS8Q9UP79 889 aa25.36■■□□□ 1.65
TGIF1-222ENST00000577543 BRCA1P38398 1863 aaKnown RBP25.36■■□□□ 1.65
TGIF1-222ENST00000577543 FKBP8Q14318 412 aa25.35■■□□□ 1.65
TGIF1-222ENST00000577543 PNISRQ8TF01 805 aaKnown RBP25.35■■□□□ 1.65
TGIF1-222ENST00000577543 RUNDC1Q96C34 613 aa25.35■■□□□ 1.65
TGIF1-222ENST00000577543 MIS18AQ9NYP9 233 aa25.35■■□□□ 1.65
TGIF1-222ENST00000577543 SNRPA1P09661 255 aaKnown RBP25.34■■□□□ 1.65
TGIF1-222ENST00000577543 USPL1Q5W0Q7 1092 aa25.34■■□□□ 1.65
TGIF1-222ENST00000577543 PELP1Q8IZL8 1130 aaKnown RBP25.34■■□□□ 1.65
TGIF1-222ENST00000577543 NARFQ9UHQ1 456 aa25.34■■□□□ 1.65
TGIF1-222ENST00000577543 RRP7AQ9Y3A4 280 aaKnown RBP25.34■■□□□ 1.65
TGIF1-222ENST00000577543 ZNF330Q9Y3S2 320 aaPredicted RBP25.34■■□□□ 1.65
TGIF1-222ENST00000577543 NRXN2Q9P2S2 1712 aa25.34■■□□□ 1.65
TGIF1-222ENST00000577543 GPR162Q16538 588 aa25.33■■□□□ 1.65
TGIF1-222ENST00000577543 PARP3Q9Y6F1 533 aa25.33■■□□□ 1.65
TGIF1-222ENST00000577543 PRAMEF22A3QJZ6 481 aa25.32■■□□□ 1.64
TGIF1-222ENST00000577543 EIF5P55010 431 aaKnown RBP25.32■■□□□ 1.64
TGIF1-222ENST00000577543 A0A087WZG4 1122 aa25.31■■□□□ 1.64
TGIF1-222ENST00000577543 IL6STP40189 918 aaPredicted RBP25.31■■□□□ 1.64
TGIF1-222ENST00000577543 NEUROD2Q15784 382 aa25.31■■□□□ 1.64
TGIF1-222ENST00000577543 PXDNLA1KZ92 1463 aa25.3■■□□□ 1.64
TGIF1-222ENST00000577543 ANP32CO43423 234 aa25.3■■□□□ 1.64
TGIF1-222ENST00000577543 A1BGP04217 495 aa25.3■■□□□ 1.64
TGIF1-222ENST00000577543 DDR1Q08345 913 aa25.29■■□□□ 1.64
TGIF1-222ENST00000577543 NPM2Q86SE8 214 aaKnown RBP25.29■■□□□ 1.64
TGIF1-222ENST00000577543 USP16Q9Y5T5 823 aa25.29■■□□□ 1.64
TGIF1-222ENST00000577543 TSPYL4Q9UJ04 414 aa25.28■■□□□ 1.64
TGIF1-222ENST00000577543 DLEC1Q9Y238 1755 aa25.26■■□□□ 1.63
TGIF1-222ENST00000577543 PIP4K2AP48426 406 aaPredicted RBP25.26■■□□□ 1.63
TGIF1-222ENST00000577543 BCL2L12Q9HB09 334 aa25.26■■□□□ 1.63
TGIF1-222ENST00000577543 POLRMTO00411 1230 aaKnown RBP25.25■■□□□ 1.63
TGIF1-222ENST00000577543 YBX3P16989 372 aaKnown RBP eCLIP25.25■■□□□ 1.639e-6■■■□□ 18.6
TGIF1-222ENST00000577543 YY1P25490 414 aa25.25■■□□□ 1.63
TGIF1-222ENST00000577543 EIF4A1P60842 406 aaKnown RBP25.25■■□□□ 1.63
TGIF1-222ENST00000577543 CCDC184Q52MB2 194 aa25.25■■□□□ 1.63
TGIF1-222ENST00000577543 ARFGEF1Q9Y6D6 1849 aa25.24■■□□□ 1.63
TGIF1-222ENST00000577543 TBC1D2BQ9UPU7 963 aa25.24■■□□□ 1.63
TGIF1-222ENST00000577543 ANKRD31Q8N7Z5 1873 aa25.23■■□□□ 1.63
TGIF1-222ENST00000577543 GIGYF1O75420 1035 aaPredicted RBP25.23■■□□□ 1.63
TGIF1-222ENST00000577543 TM4SF1P30408 202 aa25.23■■□□□ 1.63
TGIF1-222ENST00000577543 NFIXQ14938 502 aa25.23■■□□□ 1.63
TGIF1-222ENST00000577543 TRIM35Q9UPQ4 493 aa25.23■■□□□ 1.63
TGIF1-222ENST00000577543 NUP98P52948 1817 aa25.23■■□□□ 1.63
TGIF1-222ENST00000577543 BABAM1Q9NWV8 329 aa25.22■■□□□ 1.63
TGIF1-222ENST00000577543 WWC3Q9ULE0 1092 aa25.22■■□□□ 1.63
TGIF1-222ENST00000577543 DZIP3Q86Y13 1208 aaKnown RBP25.21■■□□□ 1.63
TGIF1-222ENST00000577543 MRS2Q9HD23 443 aa25.21■■□□□ 1.63
TGIF1-222ENST00000577543 NBPF26B4DH59 902 aa25.2■■□□□ 1.62
TGIF1-222ENST00000577543 NBPF10Q6P3W6 841 aaKnown RBP25.2■■□□□ 1.62
TGIF1-222ENST00000577543 NBPF15Q8N660 670 aa25.2■■□□□ 1.62
TGIF1-222ENST00000577543 APAF1O14727 1248 aa25.19■■□□□ 1.62
TGIF1-222ENST00000577543 GRIN3BO60391 1043 aa25.19■■□□□ 1.62
TGIF1-222ENST00000577543 CAMTA2O94983 1202 aa25.19■■□□□ 1.62
TGIF1-222ENST00000577543 TGFB2P61812 414 aa25.19■■□□□ 1.62
TGIF1-222ENST00000577543 BICDL1Q6ZP65 573 aa25.19■■□□□ 1.62
TGIF1-222ENST00000577543 CARMIL3Q8ND23 1372 aa25.18■■□□□ 1.62
TGIF1-222ENST00000577543 COL11A2P13942 1736 aaPredicted RBP25.18■■□□□ 1.62
TGIF1-222ENST00000577543 TBC1D9BQ66K14 1250 aa25.17■■□□□ 1.62
TGIF1-222ENST00000577543 LAS1LQ9Y4W2 734 aaKnown RBP25.17■■□□□ 1.62
TGIF1-222ENST00000577543 A0A0G2JLW4 131 aa25.16■■□□□ 1.62
TGIF1-222ENST00000577543 DPEP1P16444 411 aa25.16■■□□□ 1.62
TGIF1-222ENST00000577543 CACNA1SQ13698 1873 aa25.16■■□□□ 1.62
TGIF1-222ENST00000577543 SERPINB2P05120 415 aa25.15■■□□□ 1.62
TGIF1-222ENST00000577543 ZNF652Q9Y2D9 606 aa25.15■■□□□ 1.62
TGIF1-222ENST00000577543 ANKRD36CQ5JPF3 1778 aa25.14■■□□□ 1.62
TGIF1-222ENST00000577543 CHL1O00533 1208 aa25.14■■□□□ 1.62
TGIF1-222ENST00000577543 ERBB4Q15303 1308 aa25.13■■□□□ 1.61
TGIF1-222ENST00000577543 MYL6BP14649 208 aa25.11■■□□□ 1.61
TGIF1-222ENST00000577543 CFAP44Q96MT7 982 aa25.11■■□□□ 1.61
TGIF1-222ENST00000577543 SETDB2Q96T68 719 aa25.11■■□□□ 1.61
TGIF1-222ENST00000577543 BCS1LQ9Y276 419 aa25.11■■□□□ 1.61
TGIF1-222ENST00000577543 CALD1Q05682 793 aaKnown RBP25.1■■□□□ 1.61
TGIF1-222ENST00000577543 CLEC4GQ6UXB4 293 aa25.1■■□□□ 1.61
TGIF1-222ENST00000577543 NGEFQ8N5V2 710 aa25.1■■□□□ 1.61
TGIF1-222ENST00000577543 ARFGEF2Q9Y6D5 1785 aa25.09■■□□□ 1.61
TGIF1-222ENST00000577543 RGL2O15211 777 aa25.09■■□□□ 1.61
TGIF1-222ENST00000577543 EIF2S2P20042 333 aaKnown RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms