RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 HEG1Q9ULI3 1381 aa16.92■□□□□ 0.3
SSH2-205ENST00000577483 PXDNLA1KZ92 1463 aa16.92■□□□□ 0.3
SSH2-205ENST00000577483 MCM10Q7L590 875 aa16.91■□□□□ 0.3
SSH2-205ENST00000577483 NLGN1Q8N2Q7 840 aa16.91■□□□□ 0.3
SSH2-205ENST00000577483 DLEC1Q9Y238 1755 aa16.91■□□□□ 0.3
SSH2-205ENST00000577483 KCNQ3O43525 872 aa16.9■□□□□ 0.3
SSH2-205ENST00000577483 DCTN1Q14203 1278 aa16.9■□□□□ 0.3
SSH2-205ENST00000577483 FKBP8Q14318 412 aa16.89■□□□□ 0.29
SSH2-205ENST00000577483 PLEKHF1Q96S99 279 aa16.89■□□□□ 0.29
SSH2-205ENST00000577483 RALBP1Q15311 655 aa16.88■□□□□ 0.29
SSH2-205ENST00000577483 WWC3Q9ULE0 1092 aa16.88■□□□□ 0.29
SSH2-205ENST00000577483 ANKRD31Q8N7Z5 1873 aa16.88■□□□□ 0.29
SSH2-205ENST00000577483 BTBD11A6QL63 1104 aa16.88■□□□□ 0.29
SSH2-205ENST00000577483 DDR1Q08345 913 aa16.87■□□□□ 0.29
SSH2-205ENST00000577483 USPL1Q5W0Q7 1092 aa16.87■□□□□ 0.29
SSH2-205ENST00000577483 RTF1Q92541 710 aaKnown RBP16.87■□□□□ 0.29
SSH2-205ENST00000577483 CANXP27824 592 aaKnown RBP16.86■□□□□ 0.29
SSH2-205ENST00000577483 FMNL2Q96PY5 1086 aa16.86■□□□□ 0.29
SSH2-205ENST00000577483 ZNF784Q8NCA9 323 aaPredicted RBP16.85■□□□□ 0.29
SSH2-205ENST00000577483 PARP3Q9Y6F1 533 aa16.85■□□□□ 0.29
SSH2-205ENST00000577483 MYBBP1AQ9BQG0 1328 aaKnown RBP16.85■□□□□ 0.29
SSH2-205ENST00000577483 CACNA1SQ13698 1873 aa16.85■□□□□ 0.29
SSH2-205ENST00000577483 HTATSF1O43719 755 aaKnown RBP16.85■□□□□ 0.29
SSH2-205ENST00000577483 BCL2L12Q9HB09 334 aa16.85■□□□□ 0.29
SSH2-205ENST00000577483 NARFQ9UHQ1 456 aa16.85■□□□□ 0.29
SSH2-205ENST00000577483 PRAMEF22A3QJZ6 481 aa16.84■□□□□ 0.29
SSH2-205ENST00000577483 GRIN3BO60391 1043 aa16.84■□□□□ 0.29
SSH2-205ENST00000577483 ZPR1O75312 459 aa16.84■□□□□ 0.29
SSH2-205ENST00000577483 STARD3NLO95772 234 aa16.84■□□□□ 0.29
SSH2-205ENST00000577483 EIF5P55010 431 aaKnown RBP16.84■□□□□ 0.29
SSH2-205ENST00000577483 COL11A2P13942 1736 aaPredicted RBP16.84■□□□□ 0.29
SSH2-205ENST00000577483 POLRMTO00411 1230 aaKnown RBP16.83■□□□□ 0.28
SSH2-205ENST00000577483 TM4SF1P30408 202 aa16.83■□□□□ 0.28
SSH2-205ENST00000577483 NFE2L2Q16236 605 aa16.82■□□□□ 0.28
SSH2-205ENST00000577483 TEX13AQ9BXU3 409 aaPredicted RBP16.82■□□□□ 0.28
SSH2-205ENST00000577483 A0A0G2JLW4 131 aa16.81■□□□□ 0.28
SSH2-205ENST00000577483 A1BGP04217 495 aa16.81■□□□□ 0.28
SSH2-205ENST00000577483 NEFMP07197 916 aa16.81■□□□□ 0.28
SSH2-205ENST00000577483 TGFB2P61812 414 aa16.81■□□□□ 0.28
SSH2-205ENST00000577483 THUMPD2Q9BTF0 503 aaKnown RBP16.81■□□□□ 0.28
SSH2-205ENST00000577483 USP16Q9Y5T5 823 aa16.81■□□□□ 0.28
SSH2-205ENST00000577483 NUP98P52948 1817 aa16.81■□□□□ 0.28
SSH2-205ENST00000577483 SBF1O95248 1867 aa16.81■□□□□ 0.28
SSH2-205ENST00000577483 NFIXQ14938 502 aa16.81■□□□□ 0.28
SSH2-205ENST00000577483 MIS18AQ9NYP9 233 aa16.81■□□□□ 0.28
SSH2-205ENST00000577483 MAPK8IP3Q9UPT6 1336 aa16.81■□□□□ 0.28
SSH2-205ENST00000577483 DPEP1P16444 411 aa16.8■□□□□ 0.28
SSH2-205ENST00000577483 PIP4K2AP48426 406 aaPredicted RBP16.8■□□□□ 0.28
SSH2-205ENST00000577483 ZNF330Q9Y3S2 320 aaPredicted RBP16.8■□□□□ 0.28
SSH2-205ENST00000577483 CCDC88AQ3V6T2 1871 aa16.8■□□□□ 0.28
SSH2-205ENST00000577483 IL6STP40189 918 aaPredicted RBP16.79■□□□□ 0.28
SSH2-205ENST00000577483 TAF7Q15545 349 aaPredicted RBP16.79■□□□□ 0.28
SSH2-205ENST00000577483 CARMIL3Q8ND23 1372 aa16.78■□□□□ 0.28
SSH2-205ENST00000577483 KCNA3P22001 575 aa16.78■□□□□ 0.28
SSH2-205ENST00000577483 PRKRIP1Q9H875 184 aaPredicted RBP16.78■□□□□ 0.28
SSH2-205ENST00000577483 TBC1D2BQ9UPU7 963 aa16.78■□□□□ 0.28
SSH2-205ENST00000577483 ADCY9O60503 1353 aa16.78■□□□□ 0.28
SSH2-205ENST00000577483 PNNQ9H307 717 aaKnown RBP16.78■□□□□ 0.28
SSH2-205ENST00000577483 ARFGEF2Q9Y6D5 1785 aa16.77■□□□□ 0.28
SSH2-205ENST00000577483 A0A087WZG4 1122 aa16.77■□□□□ 0.27
SSH2-205ENST00000577483 SNRPA1P09661 255 aaKnown RBP16.77■□□□□ 0.27
SSH2-205ENST00000577483 TBC1D9BQ66K14 1250 aa16.76■□□□□ 0.27
SSH2-205ENST00000577483 BCS1LQ9Y276 419 aa16.76■□□□□ 0.27
SSH2-205ENST00000577483 SERPINB2P05120 415 aa16.75■□□□□ 0.27
SSH2-205ENST00000577483 CHRNA5P30532 468 aa16.75■□□□□ 0.27
SSH2-205ENST00000577483 BICDL1Q6ZP65 573 aa16.75■□□□□ 0.27
SSH2-205ENST00000577483 CCDC146Q8IYE0 955 aa16.75■□□□□ 0.27
SSH2-205ENST00000577483 NBPF26B4DH59 902 aa16.74■□□□□ 0.27
SSH2-205ENST00000577483 CAMTA2O94983 1202 aa16.74■□□□□ 0.27
SSH2-205ENST00000577483 NBPF10Q6P3W6 841 aaKnown RBP16.74■□□□□ 0.27
SSH2-205ENST00000577483 NBPF15Q8N660 670 aa16.74■□□□□ 0.27
SSH2-205ENST00000577483 ATP10DQ9P241 1426 aa16.74■□□□□ 0.27
SSH2-205ENST00000577483 ZEB1P37275 1124 aaPredicted RBP16.74■□□□□ 0.27
SSH2-205ENST00000577483 TMPOP42166 694 aaKnown RBP16.74■□□□□ 0.27
SSH2-205ENST00000577483 RIPK4P57078 832 aa16.74■□□□□ 0.27
SSH2-205ENST00000577483 EIF4A1P60842 406 aaKnown RBP16.73■□□□□ 0.27
SSH2-205ENST00000577483 DZIP3Q86Y13 1208 aaKnown RBP16.73■□□□□ 0.27
SSH2-205ENST00000577483 PNISRQ8TF01 805 aaKnown RBP16.73■□□□□ 0.27
SSH2-205ENST00000577483 RRP7AQ9Y3A4 280 aaKnown RBP16.73■□□□□ 0.27
SSH2-205ENST00000577483 ANKRD36CQ5JPF3 1778 aa16.73■□□□□ 0.27
SSH2-205ENST00000577483 GIGYF1O75420 1035 aaPredicted RBP16.72■□□□□ 0.27
SSH2-205ENST00000577483 PIM2Q9P1W9 311 aa16.72■□□□□ 0.27
SSH2-205ENST00000577483 FER1L6Q2WGJ9 1857 aa16.72■□□□□ 0.27
SSH2-205ENST00000577483 TIAM2Q8IVF5 1701 aa16.71■□□□□ 0.27
SSH2-205ENST00000577483 ADAMTS8Q9UP79 889 aa16.71■□□□□ 0.27
SSH2-205ENST00000577483 TNRC6CQ9HCJ0 1690 aaKnown RBP16.71■□□□□ 0.27
SSH2-205ENST00000577483 WDR43Q15061 677 aaKnown RBP eCLIP16.7■□□□□ 0.26
SSH2-205ENST00000577483 SLX4Q8IY92 1834 aa16.7■□□□□ 0.26
SSH2-205ENST00000577483 DICER1Q9UPY3 1922 aaKnown RBP16.7■□□□□ 0.26
SSH2-205ENST00000577483 NPM2Q86SE8 214 aaKnown RBP16.7■□□□□ 0.26
SSH2-205ENST00000577483 RUNDC1Q96C34 613 aa16.7■□□□□ 0.26
SSH2-205ENST00000577483 NEUROD2Q15784 382 aa16.69■□□□□ 0.26
SSH2-205ENST00000577483 DALRD3Q5D0E6 543 aaKnown RBP16.69■□□□□ 0.26
SSH2-205ENST00000577483 PRR5LQ6MZQ0 368 aa16.69■□□□□ 0.26
SSH2-205ENST00000577483 CCDC24Q8N4L8 307 aa16.69■□□□□ 0.26
SSH2-205ENST00000577483 TSPYL4Q9UJ04 414 aa16.69■□□□□ 0.26
SSH2-205ENST00000577483 TRIM35Q9UPQ4 493 aa16.68■□□□□ 0.26
SSH2-205ENST00000577483 LMOD3Q0VAK6 560 aa16.67■□□□□ 0.26
SSH2-205ENST00000577483 ARHGAP27Q6ZUM4 889 aa16.67■□□□□ 0.26
SSH2-205ENST00000577483 C2CD5Q86YS7 1000 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms