RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 C4AP0C0L4 1744 aa34.84■■■■□ 3.17
PPP4R1-204ENST00000577393 RIPK4P57078 832 aa34.83■■■■□ 3.17
PPP4R1-204ENST00000577393 MIS18AQ9NYP9 233 aa34.83■■■■□ 3.17
PPP4R1-204ENST00000577393 SRP68Q9UHB9 627 aaKnown RBP34.83■■■■□ 3.17
PPP4R1-204ENST00000577393 TMPOP42166 694 aaKnown RBP34.82■■■■□ 3.16
PPP4R1-204ENST00000577393 MMP10P09238 476 aa34.81■■■■□ 3.16
PPP4R1-204ENST00000577393 CANXP27824 592 aaKnown RBP34.81■■■■□ 3.16
PPP4R1-204ENST00000577393 NLGN2Q8NFZ4 835 aa34.81■■■■□ 3.16
PPP4R1-204ENST00000577393 RUNDC1Q96C34 613 aa34.81■■■■□ 3.16
PPP4R1-204ENST00000577393 USP42Q9H9J4 1324 aaKnown RBP34.81■■■■□ 3.16
PPP4R1-204ENST00000577393 PNISRQ8TF01 805 aaKnown RBP34.78■■■■□ 3.16
PPP4R1-204ENST00000577393 RRP7AQ9Y3A4 280 aaKnown RBP34.78■■■■□ 3.16
PPP4R1-204ENST00000577393 CD2APQ9Y5K6 639 aa34.78■■■■□ 3.16
PPP4R1-204ENST00000577393 COL15A1P39059 1388 aa34.77■■■■□ 3.16
PPP4R1-204ENST00000577393 PRAMEF22A3QJZ6 481 aa34.76■■■■□ 3.16
PPP4R1-204ENST00000577393 ZPR1O75312 459 aa34.76■■■■□ 3.16
PPP4R1-204ENST00000577393 SNRPA1P09661 255 aaKnown RBP34.76■■■■□ 3.16
PPP4R1-204ENST00000577393 USP16Q9Y5T5 823 aa34.76■■■■□ 3.16
PPP4R1-204ENST00000577393 EIF5P55010 431 aaKnown RBP34.75■■■■□ 3.15
PPP4R1-204ENST00000577393 FKBP8Q14318 412 aa34.75■■■■□ 3.15
PPP4R1-204ENST00000577393 NEUROD2Q15784 382 aa34.75■■■■□ 3.15
PPP4R1-204ENST00000577393 ANP32CO43423 234 aa34.74■■■■□ 3.15
PPP4R1-204ENST00000577393 A1BGP04217 495 aa34.74■■■■□ 3.15
PPP4R1-204ENST00000577393 LMOD3Q0VAK6 560 aa34.74■■■■□ 3.15
PPP4R1-204ENST00000577393 CCDC184Q52MB2 194 aa34.74■■■■□ 3.15
PPP4R1-204ENST00000577393 USPL1Q5W0Q7 1092 aa34.74■■■■□ 3.15
PPP4R1-204ENST00000577393 NARFQ9UHQ1 456 aa34.73■■■■□ 3.15
PPP4R1-204ENST00000577393 PARP3Q9Y6F1 533 aa34.7■■■■□ 3.15
PPP4R1-204ENST00000577393 KDM3BQ7LBC6 1761 aa34.69■■■■□ 3.14
PPP4R1-204ENST00000577393 A0A087WZG4 1122 aa34.69■■■■□ 3.14
PPP4R1-204ENST00000577393 IL6STP40189 918 aaPredicted RBP34.69■■■■□ 3.14
PPP4R1-204ENST00000577393 EIF4A1P60842 406 aaKnown RBP34.68■■■■□ 3.14
PPP4R1-204ENST00000577393 ZNF330Q9Y3S2 320 aaPredicted RBP34.68■■■■□ 3.14
PPP4R1-204ENST00000577393 GPR162Q16538 588 aa34.67■■■■□ 3.14
PPP4R1-204ENST00000577393 TRIM35Q9UPQ4 493 aa34.67■■■■□ 3.14
PPP4R1-204ENST00000577393 BCL2L12Q9HB09 334 aa34.66■■■■□ 3.14
PPP4R1-204ENST00000577393 TM4SF1P30408 202 aa34.65■■■■□ 3.14
PPP4R1-204ENST00000577393 PIP4K2AP48426 406 aaPredicted RBP34.65■■■■□ 3.14
PPP4R1-204ENST00000577393 DDR1Q08345 913 aa34.65■■■■□ 3.14
PPP4R1-204ENST00000577393 PELP1Q8IZL8 1130 aaKnown RBP34.65■■■■□ 3.14
PPP4R1-204ENST00000577393 TSPYL4Q9UJ04 414 aa34.65■■■■□ 3.14
PPP4R1-204ENST00000577393 GIGYF1O75420 1035 aaPredicted RBP34.63■■■■□ 3.13
PPP4R1-204ENST00000577393 NPM2Q86SE8 214 aaKnown RBP34.63■■■■□ 3.13
PPP4R1-204ENST00000577393 TBC1D2BQ9UPU7 963 aa34.63■■■■□ 3.13
PPP4R1-204ENST00000577393 BABAM1Q9NWV8 329 aa34.62■■■■□ 3.13
PPP4R1-204ENST00000577393 APAF1O14727 1248 aa34.61■■■■□ 3.13
PPP4R1-204ENST00000577393 POLRMTO00411 1230 aaKnown RBP34.6■■■■□ 3.13
PPP4R1-204ENST00000577393 NFIXQ14938 502 aa34.6■■■■□ 3.13
PPP4R1-204ENST00000577393 MRS2Q9HD23 443 aa34.6■■■■□ 3.13
PPP4R1-204ENST00000577393 C10orf71Q711Q0 1435 aa34.6■■■■□ 3.13
PPP4R1-204ENST00000577393 NBPF26B4DH59 902 aa34.59■■■■□ 3.13
PPP4R1-204ENST00000577393 NBPF10Q6P3W6 841 aaKnown RBP34.59■■■■□ 3.13
PPP4R1-204ENST00000577393 NBPF15Q8N660 670 aa34.59■■■■□ 3.13
PPP4R1-204ENST00000577393 UTRNP46939 3433 aa34.58■■■■□ 3.13
PPP4R1-204ENST00000577393 GOLGB1Q14789 3259 aaKnown RBP34.57■■■■□ 3.13
PPP4R1-204ENST00000577393 YBX3P16989 372 aaKnown RBP eCLIP34.57■■■■□ 3.12
PPP4R1-204ENST00000577393 KIF13BQ9NQT8 1826 aa34.57■■■■□ 3.12
PPP4R1-204ENST00000577393 DZIP3Q86Y13 1208 aaKnown RBP34.56■■■■□ 3.12
PPP4R1-204ENST00000577393 LAMB4A4D0S4 1761 aa34.55■■■■□ 3.12
PPP4R1-204ENST00000577393 CAMTA2O94983 1202 aa34.55■■■■□ 3.12
PPP4R1-204ENST00000577393 TGFB2P61812 414 aa34.55■■■■□ 3.12
PPP4R1-204ENST00000577393 CHL1O00533 1208 aa34.54■■■■□ 3.12
PPP4R1-204ENST00000577393 LAS1LQ9Y4W2 734 aaKnown RBP34.54■■■■□ 3.12
PPP4R1-204ENST00000577393 YY1P25490 414 aa34.53■■■■□ 3.12
PPP4R1-204ENST00000577393 BICDL1Q6ZP65 573 aa34.53■■■■□ 3.12
PPP4R1-204ENST00000577393 WWC3Q9ULE0 1092 aa34.53■■■■□ 3.12
PPP4R1-204ENST00000577393 PXDNLA1KZ92 1463 aa34.52■■■■□ 3.12
PPP4R1-204ENST00000577393 SCN7AQ01118 1682 aa34.52■■■■□ 3.12
PPP4R1-204ENST00000577393 TBC1D9BQ66K14 1250 aa34.52■■■■□ 3.12
PPP4R1-204ENST00000577393 A0A0G2JLW4 131 aa34.5■■■■□ 3.11
PPP4R1-204ENST00000577393 SERPINB2P05120 415 aa34.5■■■■□ 3.11
PPP4R1-204ENST00000577393 GRIN3BO60391 1043 aa34.49■■■■□ 3.11
PPP4R1-204ENST00000577393 KIAA1551Q9HCM1 1747 aa34.48■■■■□ 3.11
PPP4R1-204ENST00000577393 DPEP1P16444 411 aa34.48■■■■□ 3.11
PPP4R1-204ENST00000577393 N4BP2Q86UW6 1770 aaPredicted RBP34.47■■■■□ 3.11
PPP4R1-204ENST00000577393 AFDNP55196 1824 aaKnown RBP34.46■■■■□ 3.11
PPP4R1-204ENST00000577393 CFAP44Q96MT7 982 aa34.46■■■■□ 3.11
PPP4R1-204ENST00000577393 BCORQ6W2J9 1755 aa34.45■■■■□ 3.11
PPP4R1-204ENST00000577393 EIF2S2P20042 333 aaKnown RBP34.45■■■■□ 3.11
PPP4R1-204ENST00000577393 NGEFQ8N5V2 710 aa34.45■■■■□ 3.11
PPP4R1-204ENST00000577393 NRXN2Q9P2S2 1712 aa34.44■■■■□ 3.1
PPP4R1-204ENST00000577393 CLEC4GQ6UXB4 293 aa34.44■■■■□ 3.1
PPP4R1-204ENST00000577393 MYL6BP14649 208 aa34.43■■■■□ 3.1
PPP4R1-204ENST00000577393 KRT24Q2M2I5 525 aa34.43■■■■□ 3.1
PPP4R1-204ENST00000577393 SETDB2Q96T68 719 aa34.43■■■■□ 3.1
PPP4R1-204ENST00000577393 CHD4Q14839 1912 aa34.43■■■■□ 3.1
PPP4R1-204ENST00000577393 ERBB4Q15303 1308 aa34.42■■■■□ 3.1
PPP4R1-204ENST00000577393 KCNA3P22001 575 aa34.42■■■■□ 3.1
PPP4R1-204ENST00000577393 ZNF652Q9Y2D9 606 aa34.42■■■■□ 3.1
PPP4R1-204ENST00000577393 CARMIL3Q8ND23 1372 aa34.41■■■■□ 3.1
PPP4R1-204ENST00000577393 SENP3-EIF4A1A0A087X0R7 540 aa34.41■■■■□ 3.1
PPP4R1-204ENST00000577393 ZNF853P0CG23 659 aa34.41■■■■□ 3.1
PPP4R1-204ENST00000577393 CALD1Q05682 793 aaKnown RBP34.41■■■■□ 3.1
PPP4R1-204ENST00000577393 MBIPQ9NS73 344 aa34.4■■■■□ 3.1
PPP4R1-204ENST00000577393 RGL2O15211 777 aa34.39■■■■□ 3.1
PPP4R1-204ENST00000577393 CHRNA5P30532 468 aa34.39■■■■□ 3.1
PPP4R1-204ENST00000577393 IFT57Q9NWB7 429 aa34.39■■■■□ 3.1
PPP4R1-204ENST00000577393 PDIA6Q15084 440 aa34.38■■■■□ 3.09
PPP4R1-204ENST00000577393 HLFQ16534 295 aa34.38■■■■□ 3.09
PPP4R1-204ENST00000577393 TTLL7Q6ZT98 887 aa34.38■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms