RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 RNF217Q8TC41 542 aa4.56□□□□□ -1.68
COPS3-213ENST00000577210 STK32AQ8WU08 396 aa4.56□□□□□ -1.68
COPS3-213ENST00000577210 ZSCAN10Q96SZ4 725 aaPredicted RBP4.56□□□□□ -1.68
COPS3-213ENST00000577210 NIFKQ9BYG3 293 aaKnown RBP4.56□□□□□ -1.68
COPS3-213ENST00000577210 ETNK1Q9HBU6 452 aa4.56□□□□□ -1.68
COPS3-213ENST00000577210 SCHIP1Q9P0W5 487 aaPredicted RBP4.56□□□□□ -1.68
COPS3-213ENST00000577210 KIAA1024Q9UPX6 916 aa4.56□□□□□ -1.68
COPS3-213ENST00000577210 SFI1A8K8P3 1242 aa4.55□□□□□ -1.68
COPS3-213ENST00000577210 SSFA2P28290 1259 aa4.55□□□□□ -1.68
COPS3-213ENST00000577210 CENPCQ03188 943 aa4.55□□□□□ -1.68
COPS3-213ENST00000577210 RNFT1Q5M7Z0 435 aa4.55□□□□□ -1.68
COPS3-213ENST00000577210 FOXD4L5Q5VV16 416 aaPredicted RBP4.55□□□□□ -1.68
COPS3-213ENST00000577210 PPARGC1BQ86YN6 1023 aaKnown RBP4.55□□□□□ -1.68
COPS3-213ENST00000577210 RHBDD1Q8TEB9 315 aa4.55□□□□□ -1.68
COPS3-213ENST00000577210 CNTNAP3BQ96NU0 1288 aa4.55□□□□□ -1.68
COPS3-213ENST00000577210 CNTNAP3Q9BZ76 1288 aa4.55□□□□□ -1.68
COPS3-213ENST00000577210 POLMQ9NP87 494 aaPredicted RBP4.55□□□□□ -1.68
COPS3-213ENST00000577210 GPC6Q9Y625 555 aaPredicted RBP4.55□□□□□ -1.68
COPS3-213ENST00000577210 SENP3-EIF4A1A0A087X0R7 540 aa4.54□□□□□ -1.68
COPS3-213ENST00000577210 SLC35F4A4IF30 521 aa4.54□□□□□ -1.68
COPS3-213ENST00000577210 IL2RAP01589 272 aa4.54□□□□□ -1.68
COPS3-213ENST00000577210 WEE1P30291 646 aa4.54□□□□□ -1.68
COPS3-213ENST00000577210 FAM69CQ0P6D2 419 aa4.54□□□□□ -1.68
COPS3-213ENST00000577210 NBPF1Q3BBV0 1214 aa4.54□□□□□ -1.68
COPS3-213ENST00000577210 TSEN2Q8NCE0 465 aaKnown RBP4.54□□□□□ -1.68
COPS3-213ENST00000577210 COL25A1Q9BXS0 654 aaPredicted RBP4.54□□□□□ -1.68
COPS3-213ENST00000577210 CXXC1Q9P0U4 656 aaPredicted RBP4.54□□□□□ -1.68
COPS3-213ENST00000577210 SERTAD1Q9UHV2 236 aa4.54□□□□□ -1.68
COPS3-213ENST00000577210 ATAD2Q6PL18 1390 aa4.53□□□□□ -1.68
COPS3-213ENST00000577210 SERTM1A2A2V5 107 aa4.53□□□□□ -1.68
COPS3-213ENST00000577210 PPP1R12BO60237 982 aaPredicted RBP4.53□□□□□ -1.68
COPS3-213ENST00000577210 TATP17735 454 aaPredicted RBP4.53□□□□□ -1.68
COPS3-213ENST00000577210 ITGA6P23229 1130 aa4.53□□□□□ -1.68
COPS3-213ENST00000577210 HIRAP54198 1017 aaPredicted RBP4.53□□□□□ -1.68
COPS3-213ENST00000577210 FOXK2Q01167 660 aa4.53□□□□□ -1.68
COPS3-213ENST00000577210 TEAD4Q15561 434 aa4.53□□□□□ -1.68
COPS3-213ENST00000577210 TAS1R3Q7RTX0 852 aa4.53□□□□□ -1.68
COPS3-213ENST00000577210 LYSMD3Q7Z3D4 306 aa4.53□□□□□ -1.68
COPS3-213ENST00000577210 SLC9A9Q8IVB4 645 aa4.53□□□□□ -1.68
COPS3-213ENST00000577210 SCG3Q8WXD2 468 aaKnown RBP4.53□□□□□ -1.68
COPS3-213ENST00000577210 GRIP2Q9C0E4 1043 aa4.53□□□□□ -1.68
COPS3-213ENST00000577210 RAB6BQ9NRW1 208 aa4.53□□□□□ -1.68
COPS3-213ENST00000577210 GNEQ9Y223 722 aaKnown RBP4.53□□□□□ -1.68
COPS3-213ENST00000577210 HRH3Q9Y5N1 445 aa4.53□□□□□ -1.68
COPS3-213ENST00000577210 CDC14CA4D256 554 aa4.52□□□□□ -1.69
COPS3-213ENST00000577210 SPATA31C2B4DYI2 1134 aa4.52□□□□□ -1.69
COPS3-213ENST00000577210 EPHA4P54764 986 aa4.52□□□□□ -1.69
COPS3-213ENST00000577210 C1orf53Q5VUE5 145 aa4.52□□□□□ -1.69
COPS3-213ENST00000577210 AEBP1Q8IUX7 1158 aa4.52□□□□□ -1.69
COPS3-213ENST00000577210 TNS4Q8IZW8 715 aa4.52□□□□□ -1.69
COPS3-213ENST00000577210 VWA5B2Q8N398 1253 aa4.52□□□□□ -1.69
COPS3-213ENST00000577210 NANOS1Q8WY41 292 aaKnown RBP4.52□□□□□ -1.69
COPS3-213ENST00000577210 FHDC1Q9C0D6 1143 aaPredicted RBP4.52□□□□□ -1.69
COPS3-213ENST00000577210 CUEDC1Q9NWM3 386 aaPredicted RBP4.52□□□□□ -1.69
COPS3-213ENST00000577210 ZDHHC3Q9NYG2 299 aa4.52□□□□□ -1.69
COPS3-213ENST00000577210 CABP1Q9NZU7 370 aa4.52□□□□□ -1.69
COPS3-213ENST00000577210 EGFL7Q9UHF1 273 aa4.52□□□□□ -1.69
COPS3-213ENST00000577210 ZNF232Q9UNY5 417 aa4.52□□□□□ -1.69
COPS3-213ENST00000577210 A0A1B0GTH6 734 aa4.51□□□□□ -1.69
COPS3-213ENST00000577210 PRMT3O60678 531 aa4.51□□□□□ -1.69
COPS3-213ENST00000577210 NOS2P35228 1153 aa4.51□□□□□ -1.69
COPS3-213ENST00000577210 GSK3AP49840 483 aa4.51□□□□□ -1.69
COPS3-213ENST00000577210 SF3B2Q13435 895 aaKnown RBP4.51□□□□□ -1.69
COPS3-213ENST00000577210 LBRQ14739 615 aaKnown RBP4.51□□□□□ -1.69
COPS3-213ENST00000577210 OCLNQ16625 522 aa4.51□□□□□ -1.69
COPS3-213ENST00000577210 ZNF385CQ66K41 422 aaPredicted RBP4.51□□□□□ -1.69
COPS3-213ENST00000577210 POTEAQ6S8J7 498 aa4.51□□□□□ -1.69
COPS3-213ENST00000577210 WHAMMQ8TF30 809 aa4.51□□□□□ -1.69
COPS3-213ENST00000577210 C2orf49Q9BVC5 232 aaPredicted RBP4.51□□□□□ -1.69
COPS3-213ENST00000577210 TSPAN10Q9H1Z9 355 aaPredicted RBP4.51□□□□□ -1.69
COPS3-213ENST00000577210 NEUROD4Q9HD90 331 aa4.51□□□□□ -1.69
COPS3-213ENST00000577210 ANKIB1Q9P2G1 1089 aa4.51□□□□□ -1.69
COPS3-213ENST00000577210 RHOQP17081 205 aa4.5□□□□□ -1.69
COPS3-213ENST00000577210 PGBD3Q8N328 593 aa4.5□□□□□ -1.69
COPS3-213ENST00000577210 ABTB2Q8N961 1025 aa4.5□□□□□ -1.69
COPS3-213ENST00000577210 L3MBTL2Q969R5 705 aa4.5□□□□□ -1.69
COPS3-213ENST00000577210 GMCL1Q96IK5 515 aa4.5□□□□□ -1.69
COPS3-213ENST00000577210 PRIMPOLQ96LW4 560 aa4.5□□□□□ -1.69
COPS3-213ENST00000577210 FAM13BQ9NYF5 915 aa4.5□□□□□ -1.69
COPS3-213ENST00000577210 H7C1W4 665 aa4.49□□□□□ -1.69
COPS3-213ENST00000577210 GAS6Q14393 721 aa4.49□□□□□ -1.69
COPS3-213ENST00000577210 RTN1Q16799 776 aa4.49□□□□□ -1.69
COPS3-213ENST00000577210 ALKBH2Q6NS38 261 aa4.49□□□□□ -1.69
COPS3-213ENST00000577210 C16orf46Q6P387 395 aa4.49□□□□□ -1.69
COPS3-213ENST00000577210 NBPF10Q6P3W6 841 aaKnown RBP4.49□□□□□ -1.69
COPS3-213ENST00000577210 SV2AQ7L0J3 742 aa4.49□□□□□ -1.69
COPS3-213ENST00000577210 PRICKLE2Q7Z3G6 844 aa4.49□□□□□ -1.69
COPS3-213ENST00000577210 TXNDC2Q86VQ3 553 aa4.49□□□□□ -1.69
COPS3-213ENST00000577210 CHMP7Q8WUX9 453 aaPredicted RBP4.49□□□□□ -1.69
COPS3-213ENST00000577210 MYO19Q96H55 970 aa4.49□□□□□ -1.69
COPS3-213ENST00000577210 KRTAP4-8Q9BYQ9 185 aa4.49□□□□□ -1.69
COPS3-213ENST00000577210 TIMMDC1Q9NPL8 285 aa4.49□□□□□ -1.69
COPS3-213ENST00000577210 IQSEC3Q9UPP2 1182 aaPredicted RBP4.49□□□□□ -1.69
COPS3-213ENST00000577210 DYRK1BQ9Y463 629 aa4.49□□□□□ -1.69
COPS3-213ENST00000577210 FAM13AO94988 1023 aa4.48□□□□□ -1.69
COPS3-213ENST00000577210 RPLP1P05386 114 aaKnown RBP4.48□□□□□ -1.69
COPS3-213ENST00000577210 BRD2P25440 801 aaKnown RBP4.48□□□□□ -1.69
COPS3-213ENST00000577210 XP32Q5T750 250 aa4.48□□□□□ -1.69
COPS3-213ENST00000577210 SVOPQ8N4V2 548 aa4.48□□□□□ -1.69
COPS3-213ENST00000577210 EML1O00423 815 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 207.4 ms