RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 RGPD1P0DJD0 1748 aa12.86□□□□□ -0.35
NPLOC4-219ENST00000576713 GPIHBP1Q8IV16 184 aa12.86□□□□□ -0.35
NPLOC4-219ENST00000576713 EYA1Q99502 592 aa12.86□□□□□ -0.35
NPLOC4-219ENST00000576713 EPAS1Q99814 870 aa12.86□□□□□ -0.35
NPLOC4-219ENST00000576713 PARD3Q8TEW0 1356 aa12.85□□□□□ -0.35
NPLOC4-219ENST00000576713 HOXB1P14653 301 aaPredicted RBP12.85□□□□□ -0.35
NPLOC4-219ENST00000576713 MARCH10Q8NA82 808 aaPredicted RBP12.85□□□□□ -0.35
NPLOC4-219ENST00000576713 TNS2Q63HR2 1409 aa12.85□□□□□ -0.35
NPLOC4-219ENST00000576713 PPP2R1AP30153 589 aa12.84□□□□□ -0.35
NPLOC4-219ENST00000576713 IL13P35225 146 aa12.84□□□□□ -0.35
NPLOC4-219ENST00000576713 FOSBP53539 338 aa12.84□□□□□ -0.35
NPLOC4-219ENST00000576713 CCDC125Q86Z20 511 aa12.84□□□□□ -0.35
NPLOC4-219ENST00000576713 OVOS2A0A0G2JMS6 1433 aa12.83□□□□□ -0.36
NPLOC4-219ENST00000576713 IL2RBP14784 551 aa12.83□□□□□ -0.36
NPLOC4-219ENST00000576713 DDB1Q16531 1140 aa12.83□□□□□ -0.36
NPLOC4-219ENST00000576713 PTF1AQ7RTS3 328 aa12.83□□□□□ -0.36
NPLOC4-219ENST00000576713 AEBP1Q8IUX7 1158 aa12.83□□□□□ -0.36
NPLOC4-219ENST00000576713 IGSF1Q8N6C5 1336 aa12.83□□□□□ -0.36
NPLOC4-219ENST00000576713 TNS1Q9HBL0 1735 aaKnown RBP12.82□□□□□ -0.36
NPLOC4-219ENST00000576713 ZMYND10O75800 440 aa12.81□□□□□ -0.36
NPLOC4-219ENST00000576713 TYW1BQ6NUM6 668 aa12.81□□□□□ -0.36
NPLOC4-219ENST00000576713 LHX6Q9UPM6 363 aa12.81□□□□□ -0.36
NPLOC4-219ENST00000576713 PKD1L3Q7Z443 1732 aa12.8□□□□□ -0.36
NPLOC4-219ENST00000576713 GPR37O15354 613 aa12.8□□□□□ -0.36
NPLOC4-219ENST00000576713 EN1Q05925 392 aaPredicted RBP12.8□□□□□ -0.36
NPLOC4-219ENST00000576713 PDE3BQ13370 1112 aa12.8□□□□□ -0.36
NPLOC4-219ENST00000576713 ZNF454Q8N9F8 522 aa12.8□□□□□ -0.36
NPLOC4-219ENST00000576713 CDCA7Q9BWT1 371 aaPredicted RBP12.8□□□□□ -0.36
NPLOC4-219ENST00000576713 SRCAPQ6ZRS2 3230 aa12.79□□□□□ -0.36
NPLOC4-219ENST00000576713 EXOC5O00471 708 aa12.79□□□□□ -0.36
NPLOC4-219ENST00000576713 FBXW7Q969H0 707 aa12.79□□□□□ -0.36
NPLOC4-219ENST00000576713 SBF2Q86WG5 1849 aa12.78□□□□□ -0.36
NPLOC4-219ENST00000576713 KDRP35968 1356 aa12.78□□□□□ -0.36
NPLOC4-219ENST00000576713 KCNQ2O43526 872 aa12.77□□□□□ -0.37
NPLOC4-219ENST00000576713 TRIM37O94972 964 aa12.77□□□□□ -0.37
NPLOC4-219ENST00000576713 SULT6B1Q6IMI4 303 aa12.77□□□□□ -0.37
NPLOC4-219ENST00000576713 DEFB132Q7Z7B7 95 aa12.77□□□□□ -0.37
NPLOC4-219ENST00000576713 ZCRB1Q8TBF4 217 aaKnown RBP12.77□□□□□ -0.37
NPLOC4-219ENST00000576713 DDX54Q8TDD1 881 aaKnown RBP12.77□□□□□ -0.37
NPLOC4-219ENST00000576713 ZDHHC16Q969W1 377 aa12.77□□□□□ -0.37
NPLOC4-219ENST00000576713 TOGARAM1Q9Y4F4 1720 aa12.76□□□□□ -0.37
NPLOC4-219ENST00000576713 CYP27B1O15528 508 aa12.76□□□□□ -0.37
NPLOC4-219ENST00000576713 MAP3K7O43318 606 aa12.76□□□□□ -0.37
NPLOC4-219ENST00000576713 DIAPH1O60610 1272 aaKnown RBP12.76□□□□□ -0.37
NPLOC4-219ENST00000576713 HMOX1P09601 288 aa12.76□□□□□ -0.37
NPLOC4-219ENST00000576713 TATP17735 454 aaPredicted RBP12.76□□□□□ -0.37
NPLOC4-219ENST00000576713 FAM196AQ6ZSG2 479 aa12.76□□□□□ -0.37
NPLOC4-219ENST00000576713 RAPGEF4Q8WZA2 1011 aa12.76□□□□□ -0.37
NPLOC4-219ENST00000576713 BCL9O00512 1426 aa12.76□□□□□ -0.37
NPLOC4-219ENST00000576713 NHSQ6T4R5 1651 aa12.75□□□□□ -0.37
NPLOC4-219ENST00000576713 DOT1LQ8TEK3 1739 aa12.75□□□□□ -0.37
NPLOC4-219ENST00000576713 ACSBG1Q96GR2 724 aa12.75□□□□□ -0.37
NPLOC4-219ENST00000576713 PRKRIP1Q9H875 184 aaPredicted RBP12.75□□□□□ -0.37
NPLOC4-219ENST00000576713 PSDA5PKW4 1024 aaPredicted RBP12.74□□□□□ -0.37
NPLOC4-219ENST00000576713 ST18O60284 1047 aa12.74□□□□□ -0.37
NPLOC4-219ENST00000576713 CDHR5Q9HBB8 845 aa12.74□□□□□ -0.37
NPLOC4-219ENST00000576713 FCHSD2O94868 740 aa12.73□□□□□ -0.37
NPLOC4-219ENST00000576713 PTGDRQ13258 359 aa12.73□□□□□ -0.37
NPLOC4-219ENST00000576713 SF3B2Q13435 895 aaKnown RBP12.73□□□□□ -0.37
NPLOC4-219ENST00000576713 TSR1Q2NL82 804 aaKnown RBP12.73□□□□□ -0.37
NPLOC4-219ENST00000576713 ADAM33Q9BZ11 813 aa12.73□□□□□ -0.37
NPLOC4-219ENST00000576713 U2SURPO15042 1029 aaKnown RBP12.72□□□□□ -0.37
NPLOC4-219ENST00000576713 RALBP1Q15311 655 aa12.72□□□□□ -0.37
NPLOC4-219ENST00000576713 CCDC184Q52MB2 194 aa12.72□□□□□ -0.37
NPLOC4-219ENST00000576713 NPDC1Q9NQX5 325 aaPredicted RBP12.72□□□□□ -0.37
NPLOC4-219ENST00000576713 MYBBP1AQ9BQG0 1328 aaKnown RBP12.71□□□□□ -0.37
NPLOC4-219ENST00000576713 PCDH11XQ9BZA7 1347 aa12.71□□□□□ -0.37
NPLOC4-219ENST00000576713 PCDH11YQ9BZA8 1340 aa12.71□□□□□ -0.37
NPLOC4-219ENST00000576713 PHKG2P15735 406 aa12.71□□□□□ -0.37
NPLOC4-219ENST00000576713 BAG6P46379 1132 aa12.71□□□□□ -0.37
NPLOC4-219ENST00000576713 PPP4R3BQ5MIZ7 849 aa12.71□□□□□ -0.37
NPLOC4-219ENST00000576713 C6orf132Q5T0Z8 1188 aa12.71□□□□□ -0.37
NPLOC4-219ENST00000576713 RSPH6AQ9H0K4 717 aa12.71□□□□□ -0.37
NPLOC4-219ENST00000576713 SLC24A3Q9HC58 644 aa12.71□□□□□ -0.37
NPLOC4-219ENST00000576713 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.38
NPLOC4-219ENST00000576713 HIC1Q14526 733 aa12.7□□□□□ -0.38
NPLOC4-219ENST00000576713 BTAF1O14981 1849 aa12.69□□□□□ -0.38
NPLOC4-219ENST00000576713 GNPATO15228 680 aa12.69□□□□□ -0.38
NPLOC4-219ENST00000576713 APBA3O96018 575 aa12.69□□□□□ -0.38
NPLOC4-219ENST00000576713 EZH2Q15910 746 aaKnown RBP12.69□□□□□ -0.38
NPLOC4-219ENST00000576713 PHACTR3Q96KR7 559 aa12.69□□□□□ -0.38
NPLOC4-219ENST00000576713 CFAP53Q96M91 514 aa12.69□□□□□ -0.38
NPLOC4-219ENST00000576713 CAMKK2Q96RR4 588 aa12.69□□□□□ -0.38
NPLOC4-219ENST00000576713 SPG7Q9UQ90 795 aa12.69□□□□□ -0.38
NPLOC4-219ENST00000576713 RREB1Q92766 1687 aa12.69□□□□□ -0.38
NPLOC4-219ENST00000576713 MTHFSDQ2M296 383 aaKnown RBP12.68□□□□□ -0.38
NPLOC4-219ENST00000576713 PLEKHG2Q9H7P9 1386 aa12.68□□□□□ -0.38
NPLOC4-219ENST00000576713 U2AF1L5P0DN76 240 aaPredicted RBP12.67□□□□□ -0.38
NPLOC4-219ENST00000576713 PRKAR2BP31323 418 aa12.67□□□□□ -0.38
NPLOC4-219ENST00000576713 U2AF1Q01081 240 aaKnown RBP eCLIP12.67□□□□□ -0.382e-6■■■□□ 17.1
NPLOC4-219ENST00000576713 ZNF530Q6P9A1 599 aaPredicted RBP12.67□□□□□ -0.38
NPLOC4-219ENST00000576713 KRI1Q8N9T8 703 aaKnown RBP12.67□□□□□ -0.38
NPLOC4-219ENST00000576713 FAM163AQ96GL9 167 aaPredicted RBP12.67□□□□□ -0.38
NPLOC4-219ENST00000576713 BCL2L12Q9HB09 334 aa12.67□□□□□ -0.38
NPLOC4-219ENST00000576713 NUP188Q5SRE5 1749 aa12.67□□□□□ -0.38
NPLOC4-219ENST00000576713 FECHP22830 423 aa12.66□□□□□ -0.38
NPLOC4-219ENST00000576713 PLEKHO1Q53GL0 409 aaPredicted RBP12.66□□□□□ -0.38
NPLOC4-219ENST00000576713 IFNL2Q8IZJ0 200 aa12.66□□□□□ -0.38
NPLOC4-219ENST00000576713 SYTL4Q96C24 671 aaPredicted RBP12.66□□□□□ -0.38
NPLOC4-219ENST00000576713 ITGB4P16144 1822 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms