RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 CT47B1P0C2W7 299 aaPredicted RBP11□□□□□ -0.65
PRPF8-213ENST00000576407 CYP19A1P11511 503 aaPredicted RBP11□□□□□ -0.65
PRPF8-213ENST00000576407 EIF2S2P20042 333 aaKnown RBP11□□□□□ -0.65
PRPF8-213ENST00000576407 EZH2Q15910 746 aaKnown RBP11□□□□□ -0.65
PRPF8-213ENST00000576407 HDGFL1Q5TGJ6 251 aa11□□□□□ -0.65
PRPF8-213ENST00000576407 LINC00116Q8NCU8 138 aa11□□□□□ -0.65
PRPF8-213ENST00000576407 NECTIN2Q92692 538 aa11□□□□□ -0.65
PRPF8-213ENST00000576407 COL5A3P25940 1745 aaPredicted RBP11□□□□□ -0.65
PRPF8-213ENST00000576407 STARD3NLO95772 234 aa10.99□□□□□ -0.65
PRPF8-213ENST00000576407 TAF1LQ8IZX4 1826 aa10.99□□□□□ -0.65
PRPF8-213ENST00000576407 TCERG1O14776 1098 aaKnown RBP10.98□□□□□ -0.65
PRPF8-213ENST00000576407 A1BGP04217 495 aa10.98□□□□□ -0.65
PRPF8-213ENST00000576407 CRKLP46109 303 aaKnown RBP10.98□□□□□ -0.65
PRPF8-213ENST00000576407 CCDC30Q5VVM6 783 aa10.98□□□□□ -0.65
PRPF8-213ENST00000576407 ZNF428Q96B54 188 aa10.98□□□□□ -0.65
PRPF8-213ENST00000576407 ANP32EQ9BTT0 268 aa10.98□□□□□ -0.65
PRPF8-213ENST00000576407 CHMP4AQ9BY43 222 aa10.98□□□□□ -0.65
PRPF8-213ENST00000576407 RREB1Q92766 1687 aa10.98□□□□□ -0.65
PRPF8-213ENST00000576407 C4BP0C0L5 1744 aa10.98□□□□□ -0.65
PRPF8-213ENST00000576407 PIP4K2AP48426 406 aaPredicted RBP10.97□□□□□ -0.65
PRPF8-213ENST00000576407 INTS5Q6P9B9 1019 aaKnown RBP10.97□□□□□ -0.65
PRPF8-213ENST00000576407 BCL11AQ9H165 835 aa10.97□□□□□ -0.65
PRPF8-213ENST00000576407 CCDC87Q9NVE4 849 aa10.97□□□□□ -0.65
PRPF8-213ENST00000576407 CHPF2Q9P2E5 772 aa10.97□□□□□ -0.65
PRPF8-213ENST00000576407 CNTNAP4Q9C0A0 1308 aa10.97□□□□□ -0.65
PRPF8-213ENST00000576407 ERBB4Q15303 1308 aa10.96□□□□□ -0.65
PRPF8-213ENST00000576407 NBPF26B4DH59 902 aa10.96□□□□□ -0.65
PRPF8-213ENST00000576407 ADRA2BP18089 450 aa10.96□□□□□ -0.65
PRPF8-213ENST00000576407 HMGB2P26583 209 aaKnown RBP10.96□□□□□ -0.65
PRPF8-213ENST00000576407 RARSP54136 660 aaKnown RBP10.96□□□□□ -0.65
PRPF8-213ENST00000576407 PDIA6Q15084 440 aa10.96□□□□□ -0.65
PRPF8-213ENST00000576407 PROSER3Q2NL68 480 aa10.96□□□□□ -0.65
PRPF8-213ENST00000576407 ALDH1L2Q3SY69 923 aa10.96□□□□□ -0.65
PRPF8-213ENST00000576407 RC3H1Q5TC82 1133 aaKnown RBP10.96□□□□□ -0.65
PRPF8-213ENST00000576407 NBPF14Q5TI25 921 aa10.96□□□□□ -0.65
PRPF8-213ENST00000576407 NBPF10Q6P3W6 841 aaKnown RBP10.96□□□□□ -0.65
PRPF8-213ENST00000576407 NBPF15Q8N660 670 aa10.96□□□□□ -0.65
PRPF8-213ENST00000576407 SSH1Q8WYL5 1049 aa10.96□□□□□ -0.65
PRPF8-213ENST00000576407 STK31Q9BXU1 1019 aa10.96□□□□□ -0.65
PRPF8-213ENST00000576407 DBF4Q9UBU7 674 aaPredicted RBP10.96□□□□□ -0.65
PRPF8-213ENST00000576407 ZBTB1Q9Y2K1 713 aa10.96□□□□□ -0.65
PRPF8-213ENST00000576407 MYH14Q7Z406 1995 aaKnown RBP10.96□□□□□ -0.66
PRPF8-213ENST00000576407 NUP188Q5SRE5 1749 aa10.95□□□□□ -0.66
PRPF8-213ENST00000576407 ANXA1P04083 346 aa10.95□□□□□ -0.66
PRPF8-213ENST00000576407 SLC4A2P04920 1241 aa10.95□□□□□ -0.66
PRPF8-213ENST00000576407 MYL6BP14649 208 aa10.95□□□□□ -0.66
PRPF8-213ENST00000576407 CANXP27824 592 aaKnown RBP10.95□□□□□ -0.66
PRPF8-213ENST00000576407 BCL2L13Q9BXK5 485 aa10.95□□□□□ -0.66
PRPF8-213ENST00000576407 DDX21Q9NR30 783 aaKnown RBP eCLIP10.95□□□□□ -0.66
PRPF8-213ENST00000576407 SMC4Q9NTJ3 1288 aa10.95□□□□□ -0.66
PRPF8-213ENST00000576407 RCAN3Q9UKA8 241 aa10.95□□□□□ -0.66
PRPF8-213ENST00000576407 GNPATO15228 680 aa10.94□□□□□ -0.66
PRPF8-213ENST00000576407 RPS6KA4O75676 772 aa10.94□□□□□ -0.66
PRPF8-213ENST00000576407 BCAR3O75815 825 aa10.94□□□□□ -0.66
PRPF8-213ENST00000576407 ZNF827Q17R98 1081 aa10.94□□□□□ -0.66
PRPF8-213ENST00000576407 LRP10Q7Z4F1 713 aa10.94□□□□□ -0.66
PRPF8-213ENST00000576407 AKT1S1Q96B36 256 aa10.94□□□□□ -0.66
PRPF8-213ENST00000576407 AK7Q96M32 723 aa10.94□□□□□ -0.66
PRPF8-213ENST00000576407 HYPKQ9NX55 129 aa10.94□□□□□ -0.66
PRPF8-213ENST00000576407 IL6STP40189 918 aaPredicted RBP10.93□□□□□ -0.66
PRPF8-213ENST00000576407 EIF5P55010 431 aaKnown RBP10.93□□□□□ -0.66
PRPF8-213ENST00000576407 SMIM5Q71RC9 77 aa10.93□□□□□ -0.66
PRPF8-213ENST00000576407 G2E3Q7L622 706 aa10.93□□□□□ -0.66
PRPF8-213ENST00000576407 AMIGO3Q86WK7 504 aa10.93□□□□□ -0.66
PRPF8-213ENST00000576407 MRPL50Q8N5N7 158 aaKnown RBP10.93□□□□□ -0.66
PRPF8-213ENST00000576407 PHAXQ9H814 394 aaKnown RBP10.93□□□□□ -0.66
PRPF8-213ENST00000576407 ANO8Q9HCE9 1232 aaPredicted RBP10.93□□□□□ -0.66
PRPF8-213ENST00000576407 RTCBQ9Y3I0 505 aaKnown RBP10.93□□□□□ -0.66
PRPF8-213ENST00000576407 ZNF330Q9Y3S2 320 aaPredicted RBP10.93□□□□□ -0.66
PRPF8-213ENST00000576407 UBR3Q6ZT12 1888 aa10.92□□□□□ -0.66
PRPF8-213ENST00000576407 BRPF1P55201 1214 aaPredicted RBP10.92□□□□□ -0.66
PRPF8-213ENST00000576407 COPS6Q7L5N1 327 aa10.92□□□□□ -0.66
PRPF8-213ENST00000576407 TFCP2L1Q9NZI6 479 aa10.92□□□□□ -0.66
PRPF8-213ENST00000576407 COL15A1P39059 1388 aa10.91□□□□□ -0.66
PRPF8-213ENST00000576407 CACNA1FO60840 1977 aa10.91□□□□□ -0.66
PRPF8-213ENST00000576407 PHF14O94880 888 aa10.91□□□□□ -0.66
PRPF8-213ENST00000576407 AIMP1Q12904 312 aaKnown RBP10.91□□□□□ -0.66
PRPF8-213ENST00000576407 FLIIQ13045 1269 aa10.91□□□□□ -0.66
PRPF8-213ENST00000576407 SLC15A2Q16348 729 aa10.91□□□□□ -0.66
PRPF8-213ENST00000576407 NPM2Q86SE8 214 aaKnown RBP10.91□□□□□ -0.66
PRPF8-213ENST00000576407 XAGE3Q8WTP9 111 aa10.91□□□□□ -0.66
PRPF8-213ENST00000576407 STK32BQ9NY57 414 aa10.91□□□□□ -0.66
PRPF8-213ENST00000576407 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.9□□□□□ -0.66
PRPF8-213ENST00000576407 SSFA2P28290 1259 aa10.9□□□□□ -0.66
PRPF8-213ENST00000576407 TRAPPC3LQ5T215 181 aa10.9□□□□□ -0.66
PRPF8-213ENST00000576407 TTLL7Q6ZT98 887 aa10.9□□□□□ -0.66
PRPF8-213ENST00000576407 ARHGEF1Q92888 912 aaKnown RBP10.9□□□□□ -0.66
PRPF8-213ENST00000576407 ARXQ96QS3 562 aa10.9□□□□□ -0.66
PRPF8-213ENST00000576407 NOB1Q9ULX3 412 aaKnown RBP10.9□□□□□ -0.66
PRPF8-213ENST00000576407 TBC1D2BQ9UPU7 963 aa10.9□□□□□ -0.66
PRPF8-213ENST00000576407 TUBGCP6Q96RT7 1819 aa10.9□□□□□ -0.66
PRPF8-213ENST00000576407 KIF16BQ96L93 1317 aa10.89□□□□□ -0.67
PRPF8-213ENST00000576407 A0A087WZG4 1122 aa10.89□□□□□ -0.67
PRPF8-213ENST00000576407 FKBP5Q13451 457 aaPredicted RBP10.89□□□□□ -0.67
PRPF8-213ENST00000576407 ANKRD13DQ6ZTN6 518 aa10.89□□□□□ -0.67
PRPF8-213ENST00000576407 DZIP3Q86Y13 1208 aaKnown RBP10.89□□□□□ -0.67
PRPF8-213ENST00000576407 FRAT1Q92837 279 aaPredicted RBP10.89□□□□□ -0.67
PRPF8-213ENST00000576407 C4AP0C0L4 1744 aa10.89□□□□□ -0.67
PRPF8-213ENST00000576407 PTPRCP08575 1304 aa10.88□□□□□ -0.67
PRPF8-213ENST00000576407 PNPLA7Q6ZV29 1317 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms