RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 CCDC61Q9Y6R9 512 aa15.35■□□□□ 0.05
PCDHGB3-201ENST00000576222 FLIIQ13045 1269 aa15.35■□□□□ 0.05
PCDHGB3-201ENST00000576222 FSIP1Q8NA03 581 aa15.35■□□□□ 0.05
PCDHGB3-201ENST00000576222 TOP1P11387 765 aaKnown RBP15.35■□□□□ 0.05
PCDHGB3-201ENST00000576222 ARHGAP29Q52LW3 1261 aa15.35■□□□□ 0.05
PCDHGB3-201ENST00000576222 CEP89Q96ST8 783 aa15.35■□□□□ 0.05
PCDHGB3-201ENST00000576222 GBP3Q9H0R5 595 aa15.35■□□□□ 0.05
PCDHGB3-201ENST00000576222 BOLA2Q9H3K6 86 aa15.35■□□□□ 0.05
PCDHGB3-201ENST00000576222 NOS1P29475 1434 aa15.34■□□□□ 0.05
PCDHGB3-201ENST00000576222 PIP4K2AP48426 406 aaPredicted RBP15.34■□□□□ 0.05
PCDHGB3-201ENST00000576222 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.34■□□□□ 0.05
PCDHGB3-201ENST00000576222 V9GYY5 206 aaPredicted RBP15.34■□□□□ 0.05
PCDHGB3-201ENST00000576222 CASQ1P31415 396 aa15.34■□□□□ 0.05
PCDHGB3-201ENST00000576222 TYRO3Q06418 890 aa15.34■□□□□ 0.05
PCDHGB3-201ENST00000576222 TSPYL6Q8N831 410 aa15.34■□□□□ 0.05
PCDHGB3-201ENST00000576222 TMEM63CQ9P1W3 806 aa15.34■□□□□ 0.05
PCDHGB3-201ENST00000576222 NECAB1Q8N987 351 aa15.34■□□□□ 0.05
PCDHGB3-201ENST00000576222 KIAA0754O94854 1291 aa15.34■□□□□ 0.05
PCDHGB3-201ENST00000576222 PLEKHO1Q53GL0 409 aaPredicted RBP15.34■□□□□ 0.05
PCDHGB3-201ENST00000576222 USP8P40818 1118 aa15.33■□□□□ 0.05
PCDHGB3-201ENST00000576222 PSME1Q06323 249 aa15.33■□□□□ 0.05
PCDHGB3-201ENST00000576222 BRMS1Q9HCU9 246 aa15.33■□□□□ 0.05
PCDHGB3-201ENST00000576222 FYB1O15117 783 aa15.33■□□□□ 0.04
PCDHGB3-201ENST00000576222 C17orf53Q8N3J3 647 aaPredicted RBP15.33■□□□□ 0.04
PCDHGB3-201ENST00000576222 ZNF397Q8NF99 534 aaPredicted RBP15.33■□□□□ 0.04
PCDHGB3-201ENST00000576222 NUP153P49790 1475 aaKnown RBP15.33■□□□□ 0.04
PCDHGB3-201ENST00000576222 SLU7O95391 586 aaKnown RBP15.33■□□□□ 0.04
PCDHGB3-201ENST00000576222 JAKMIP3Q5VZ66 844 aa15.33■□□□□ 0.04
PCDHGB3-201ENST00000576222 RIOK3O14730 519 aaKnown RBP15.32■□□□□ 0.04
PCDHGB3-201ENST00000576222 GUCY1B3Q02153 619 aa15.32■□□□□ 0.04
PCDHGB3-201ENST00000576222 TRMT2AQ8IZ69 625 aaKnown RBP15.32■□□□□ 0.04
PCDHGB3-201ENST00000576222 NUDT16Q96DE0 195 aaKnown RBP15.32■□□□□ 0.04
PCDHGB3-201ENST00000576222 ECHDC1Q9NTX5 307 aa15.32■□□□□ 0.04
PCDHGB3-201ENST00000576222 GNAT3A8MTJ3 354 aa15.32■□□□□ 0.04
PCDHGB3-201ENST00000576222 SART3Q15020 963 aaKnown RBP15.32■□□□□ 0.04
PCDHGB3-201ENST00000576222 CEP85Q6P2H3 762 aa15.32■□□□□ 0.04
PCDHGB3-201ENST00000576222 RAPGEF4Q8WZA2 1011 aa15.32■□□□□ 0.04
PCDHGB3-201ENST00000576222 DNAJC25Q9H1X3 360 aa15.32■□□□□ 0.04
PCDHGB3-201ENST00000576222 EPB41L2O43491 1005 aaKnown RBP15.32■□□□□ 0.04
PCDHGB3-201ENST00000576222 CCAR1Q8IX12 1150 aaKnown RBP15.32■□□□□ 0.04
PCDHGB3-201ENST00000576222 EIF2AK4Q9P2K8 1649 aaKnown RBP15.32■□□□□ 0.04
PCDHGB3-201ENST00000576222 TAF7Q15545 349 aaPredicted RBP15.32■□□□□ 0.04
PCDHGB3-201ENST00000576222 STK11IPQ8N1F8 1099 aa15.32■□□□□ 0.04
PCDHGB3-201ENST00000576222 ABTB2Q8N961 1025 aa15.32■□□□□ 0.04
PCDHGB3-201ENST00000576222 FBLN1P23142 703 aa15.31■□□□□ 0.04
PCDHGB3-201ENST00000576222 U2AF2P26368 475 aaKnown RBP eCLIP15.31■□□□□ 0.04
PCDHGB3-201ENST00000576222 ZNHIT6Q9NWK9 470 aaKnown RBP15.31■□□□□ 0.04
PCDHGB3-201ENST00000576222 CCDC150Q8NCX0 1101 aa15.31■□□□□ 0.04
PCDHGB3-201ENST00000576222 FAM193AP78312 1265 aa15.31■□□□□ 0.04
PCDHGB3-201ENST00000576222 KIF4BQ2VIQ3 1234 aa15.31■□□□□ 0.04
PCDHGB3-201ENST00000576222 WAPLQ7Z5K2 1190 aa15.31■□□□□ 0.04
PCDHGB3-201ENST00000576222 EVI5LQ96CN4 794 aa15.31■□□□□ 0.04
PCDHGB3-201ENST00000576222 CTTNBP2Q8WZ74 1663 aa15.31■□□□□ 0.04
PCDHGB3-201ENST00000576222 BIN1O00499 593 aa15.31■□□□□ 0.04
PCDHGB3-201ENST00000576222 SLC3A2P08195 630 aaKnown RBP15.31■□□□□ 0.04
PCDHGB3-201ENST00000576222 PPP1R42Q7Z4L9 355 aa15.31■□□□□ 0.04
PCDHGB3-201ENST00000576222 LMAN1P49257 510 aa15.3■□□□□ 0.04
PCDHGB3-201ENST00000576222 URB2Q14146 1524 aaKnown RBP15.3■□□□□ 0.04
PCDHGB3-201ENST00000576222 TSC1Q92574 1164 aa15.3■□□□□ 0.04
PCDHGB3-201ENST00000576222 CCDC8Q9H0W5 538 aaPredicted RBP15.3■□□□□ 0.04
PCDHGB3-201ENST00000576222 CTNNA3Q9UI47 895 aa15.3■□□□□ 0.04
PCDHGB3-201ENST00000576222 DNMT1P26358 1616 aaKnown RBP15.3■□□□□ 0.04
PCDHGB3-201ENST00000576222 KIF5CO60282 957 aa15.29■□□□□ 0.04
PCDHGB3-201ENST00000576222 SYT1P21579 422 aa15.29■□□□□ 0.04
PCDHGB3-201ENST00000576222 ZNF530Q6P9A1 599 aaPredicted RBP15.29■□□□□ 0.04
PCDHGB3-201ENST00000576222 RHPN1Q8TCX5 695 aa15.29■□□□□ 0.04
PCDHGB3-201ENST00000576222 MAGEC2Q9UBF1 373 aaPredicted RBP15.29■□□□□ 0.04
PCDHGB3-201ENST00000576222 ZNF521Q96K83 1311 aa15.29■□□□□ 0.04
PCDHGB3-201ENST00000576222 CDKL5O76039 1030 aa15.29■□□□□ 0.04
PCDHGB3-201ENST00000576222 TXLNBQ8N3L3 684 aa15.29■□□□□ 0.04
PCDHGB3-201ENST00000576222 AK2P54819 239 aa15.29■□□□□ 0.04
PCDHGB3-201ENST00000576222 LUZP1Q86V48 1076 aa15.29■□□□□ 0.04
PCDHGB3-201ENST00000576222 TRIM22Q8IYM9 498 aa15.29■□□□□ 0.04
PCDHGB3-201ENST00000576222 OTUD7AQ8TE49 926 aaPredicted RBP15.29■□□□□ 0.04
PCDHGB3-201ENST00000576222 CRACR2AQ9BSW2 395 aa15.29■□□□□ 0.04
PCDHGB3-201ENST00000576222 GRIN2AQ12879 1464 aa15.29■□□□□ 0.04
PCDHGB3-201ENST00000576222 CCDC158Q5M9N0 1113 aa15.29■□□□□ 0.04
PCDHGB3-201ENST00000576222 C8orf76Q96K31 380 aa15.29■□□□□ 0.04
PCDHGB3-201ENST00000576222 ZSCAN16Q9H4T2 348 aaPredicted RBP15.29■□□□□ 0.04
PCDHGB3-201ENST00000576222 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
PCDHGB3-201ENST00000576222 TBC1D2BQ9UPU7 963 aa15.28■□□□□ 0.04
PCDHGB3-201ENST00000576222 CHMLP26374 656 aa15.28■□□□□ 0.04
PCDHGB3-201ENST00000576222 DNAI1Q9UI46 699 aa15.28■□□□□ 0.04
PCDHGB3-201ENST00000576222 NPHP3Q7Z494 1330 aa15.28■□□□□ 0.04
PCDHGB3-201ENST00000576222 DNAAF4Q8WXU2 420 aa15.28■□□□□ 0.04
PCDHGB3-201ENST00000576222 A2MP01023 1474 aa15.28■□□□□ 0.04
PCDHGB3-201ENST00000576222 ITSN2Q9NZM3 1697 aa15.28■□□□□ 0.04
PCDHGB3-201ENST00000576222 HMGB1P09429 215 aaKnown RBP15.28■□□□□ 0.04
PCDHGB3-201ENST00000576222 TMX1Q9H3N1 280 aa15.28■□□□□ 0.04
PCDHGB3-201ENST00000576222 GNG11P61952 73 aa15.27■□□□□ 0.04
PCDHGB3-201ENST00000576222 USP19O94966 1318 aa15.27■□□□□ 0.04
PCDHGB3-201ENST00000576222 RRP12Q5JTH9 1297 aaKnown RBP15.27■□□□□ 0.04
PCDHGB3-201ENST00000576222 BCL2L12Q9HB09 334 aa15.27■□□□□ 0.04
PCDHGB3-201ENST00000576222 GOLGA6L9A6NEM1 432 aa15.27■□□□□ 0.03
PCDHGB3-201ENST00000576222 CCT2P78371 535 aaKnown RBP15.27■□□□□ 0.03
PCDHGB3-201ENST00000576222 ATP8B2P98198 1209 aa15.27■□□□□ 0.03
PCDHGB3-201ENST00000576222 TCEANC2Q96MN5 208 aa15.27■□□□□ 0.03
PCDHGB3-201ENST00000576222 RAPGEF6Q8TEU7 1601 aa15.27■□□□□ 0.03
PCDHGB3-201ENST00000576222 TTC39AQ5SRH9 613 aa15.26■□□□□ 0.03
PCDHGB3-201ENST00000576222 CCDC69A6NI79 296 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms