RNA–Protein interactions for RNA: ENST00000575397.5

RFWD3-211, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 2

Gene RFWD3, Length 841 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-211ENST00000575397 RPS6KA4O75676 772 aa12.51□□□□□ -0.41
RFWD3-211ENST00000575397 DALRD3Q5D0E6 543 aaKnown RBP12.51□□□□□ -0.41
RFWD3-211ENST00000575397 DCAF5Q96JK2 942 aa12.51□□□□□ -0.41
RFWD3-211ENST00000575397 CNTNAP4Q9C0A0 1308 aa12.51□□□□□ -0.41
RFWD3-211ENST00000575397 DDR1Q08345 913 aa12.5□□□□□ -0.41
RFWD3-211ENST00000575397 RC3H1Q5TC82 1133 aaKnown RBP12.5□□□□□ -0.41
RFWD3-211ENST00000575397 PANK3Q9H999 370 aa12.5□□□□□ -0.41
RFWD3-211ENST00000575397 ZNF831Q5JPB2 1677 aa12.5□□□□□ -0.41
RFWD3-211ENST00000575397 TNRC6CQ9HCJ0 1690 aaKnown RBP12.5□□□□□ -0.41
RFWD3-211ENST00000575397 MYH14Q7Z406 1995 aaKnown RBP12.49□□□□□ -0.41
RFWD3-211ENST00000575397 RASSF7Q02833 373 aa12.49□□□□□ -0.41
RFWD3-211ENST00000575397 EIF4A2Q14240 407 aaKnown RBP12.49□□□□□ -0.41
RFWD3-211ENST00000575397 POLKQ9UBT6 870 aa12.49□□□□□ -0.41
RFWD3-211ENST00000575397 KDM6AO15550 1401 aaPredicted RBP12.48□□□□□ -0.41
RFWD3-211ENST00000575397 ERVV-2B6SEH9 535 aa12.48□□□□□ -0.41
RFWD3-211ENST00000575397 PTCD1O75127 700 aaKnown RBP12.48□□□□□ -0.41
RFWD3-211ENST00000575397 TNNT2P45379 298 aaPredicted RBP12.48□□□□□ -0.41
RFWD3-211ENST00000575397 CRKLP46109 303 aaKnown RBP12.48□□□□□ -0.41
RFWD3-211ENST00000575397 PRELPP51888 382 aa12.48□□□□□ -0.41
RFWD3-211ENST00000575397 C1QBPQ07021 282 aaKnown RBP12.48□□□□□ -0.41
RFWD3-211ENST00000575397 SMC1BQ8NDV3 1235 aa12.48□□□□□ -0.41
RFWD3-211ENST00000575397 KNSTRNQ9Y448 316 aa12.48□□□□□ -0.41
RFWD3-211ENST00000575397 USP42Q9H9J4 1324 aaKnown RBP12.47□□□□□ -0.41
RFWD3-211ENST00000575397 HSPA1AP0DMV8 641 aaKnown RBP12.47□□□□□ -0.41
RFWD3-211ENST00000575397 HSPA1BP0DMV9 641 aaKnown RBP12.47□□□□□ -0.41
RFWD3-211ENST00000575397 CABP4P57796 275 aa12.47□□□□□ -0.41
RFWD3-211ENST00000575397 NGEFQ8N5V2 710 aa12.47□□□□□ -0.41
RFWD3-211ENST00000575397 SBF1O95248 1867 aa12.46□□□□□ -0.41
RFWD3-211ENST00000575397 TJP1Q07157 1748 aa12.45□□□□□ -0.42
RFWD3-211ENST00000575397 POLRMTO00411 1230 aaKnown RBP12.45□□□□□ -0.42
RFWD3-211ENST00000575397 IRX6P78412 446 aaPredicted RBP12.45□□□□□ -0.42
RFWD3-211ENST00000575397 ZNF530Q6P9A1 599 aaPredicted RBP12.45□□□□□ -0.42
RFWD3-211ENST00000575397 HSP90AB1P08238 724 aaKnown RBP12.44□□□□□ -0.42
RFWD3-211ENST00000575397 RRP1P56182 461 aaKnown RBP12.44□□□□□ -0.42
RFWD3-211ENST00000575397 AMER1Q5JTC6 1135 aaPredicted RBP12.44□□□□□ -0.42
RFWD3-211ENST00000575397 USPL1Q5W0Q7 1092 aa12.44□□□□□ -0.42
RFWD3-211ENST00000575397 ANP32EQ9BTT0 268 aa12.44□□□□□ -0.42
RFWD3-211ENST00000575397 ADAMTS7Q9UKP4 1686 aa12.44□□□□□ -0.42
RFWD3-211ENST00000575397 TM4SF1P30408 202 aa12.43□□□□□ -0.42
RFWD3-211ENST00000575397 MTHFSP49914 203 aa12.43□□□□□ -0.42
RFWD3-211ENST00000575397 PLEKHO1Q53GL0 409 aaPredicted RBP12.43□□□□□ -0.42
RFWD3-211ENST00000575397 NFATC2IPQ8NCF5 419 aa12.43□□□□□ -0.42
RFWD3-211ENST00000575397 RCAN3Q9UKA8 241 aa12.43□□□□□ -0.42
RFWD3-211ENST00000575397 TIAM2Q8IVF5 1701 aa12.42□□□□□ -0.42
RFWD3-211ENST00000575397 GLTPD2A6NH11 291 aa12.42□□□□□ -0.42
RFWD3-211ENST00000575397 INTS5Q6P9B9 1019 aaKnown RBP12.42□□□□□ -0.42
RFWD3-211ENST00000575397 AEBP1Q8IUX7 1158 aa12.42□□□□□ -0.42
RFWD3-211ENST00000575397 CCDC136Q96JN2 1154 aa12.42□□□□□ -0.42
RFWD3-211ENST00000575397 VEGFAP15692 232 aaPredicted RBP12.41□□□□□ -0.42
RFWD3-211ENST00000575397 LMNB1P20700 586 aa12.41□□□□□ -0.42
RFWD3-211ENST00000575397 CC2D1BQ5T0F9 858 aaKnown RBP12.41□□□□□ -0.42
RFWD3-211ENST00000575397 DNAJC10Q8IXB1 793 aa12.41□□□□□ -0.42
RFWD3-211ENST00000575397 AFDNP55196 1824 aaKnown RBP12.4□□□□□ -0.42
RFWD3-211ENST00000575397 POTECB2RU33 542 aa12.4□□□□□ -0.42
RFWD3-211ENST00000575397 ZPR1O75312 459 aa12.4□□□□□ -0.42
RFWD3-211ENST00000575397 PPP2R1AP30153 589 aa12.4□□□□□ -0.42
RFWD3-211ENST00000575397 WDR43Q15061 677 aaKnown RBP eCLIP12.4□□□□□ -0.42
RFWD3-211ENST00000575397 C1orf141Q5JVX7 400 aa12.4□□□□□ -0.42
RFWD3-211ENST00000575397 B4GALNT3Q6L9W6 998 aa12.4□□□□□ -0.42
RFWD3-211ENST00000575397 PPP4R3CPQ6ZMV5 832 aa12.4□□□□□ -0.42
RFWD3-211ENST00000575397 ZC3H4Q9UPT8 1303 aaKnown RBP12.39□□□□□ -0.43
RFWD3-211ENST00000575397 NFKBIEO00221 500 aa12.39□□□□□ -0.43
RFWD3-211ENST00000575397 CNGB1Q14028 1251 aaPredicted RBP12.39□□□□□ -0.43
RFWD3-211ENST00000575397 NFIXQ14938 502 aa12.39□□□□□ -0.43
RFWD3-211ENST00000575397 AMOTQ4VCS5 1084 aa12.39□□□□□ -0.43
RFWD3-211ENST00000575397 CARMIL3Q8ND23 1372 aa12.39□□□□□ -0.43
RFWD3-211ENST00000575397 SOS1Q07889 1333 aaPredicted RBP12.38□□□□□ -0.43
RFWD3-211ENST00000575397 DLEC1Q9Y238 1755 aa12.38□□□□□ -0.43
RFWD3-211ENST00000575397 CCDC88AQ3V6T2 1871 aa12.38□□□□□ -0.43
RFWD3-211ENST00000575397 NRXN2Q9P2S2 1712 aa12.38□□□□□ -0.43
RFWD3-211ENST00000575397 SERPINB2P05120 415 aa12.38□□□□□ -0.43
RFWD3-211ENST00000575397 TTLL6Q8N841 843 aa12.38□□□□□ -0.43
RFWD3-211ENST00000575397 ZNF219Q9P2Y4 722 aaPredicted RBP12.38□□□□□ -0.43
RFWD3-211ENST00000575397 MKRN1Q9UHC7 482 aaKnown RBP12.38□□□□□ -0.43
RFWD3-211ENST00000575397 SLC39A6Q13433 755 aa12.37□□□□□ -0.43
RFWD3-211ENST00000575397 C2CD5Q86YS7 1000 aa12.37□□□□□ -0.43
RFWD3-211ENST00000575397 BCL2L12Q9HB09 334 aa12.37□□□□□ -0.43
RFWD3-211ENST00000575397 ZBTB1Q9Y2K1 713 aa12.37□□□□□ -0.43
RFWD3-211ENST00000575397 COL15A1P39059 1388 aa12.37□□□□□ -0.43
RFWD3-211ENST00000575397 SCN11AQ9UI33 1791 aa12.36□□□□□ -0.43
RFWD3-211ENST00000575397 POTEIP0CG38 1075 aa12.36□□□□□ -0.43
RFWD3-211ENST00000575397 POTEJP0CG39 1038 aa12.36□□□□□ -0.43
RFWD3-211ENST00000575397 CYP19A1P11511 503 aaPredicted RBP12.36□□□□□ -0.43
RFWD3-211ENST00000575397 SULT6B1Q6IMI4 303 aa12.36□□□□□ -0.43
RFWD3-211ENST00000575397 BICDL1Q6ZP65 573 aa12.36□□□□□ -0.43
RFWD3-211ENST00000575397 NARFQ9UHQ1 456 aa12.36□□□□□ -0.43
RFWD3-211ENST00000575397 NCBP3Q53F19 620 aaKnown RBP12.35□□□□□ -0.43
RFWD3-211ENST00000575397 CCDC24Q8N4L8 307 aa12.35□□□□□ -0.43
RFWD3-211ENST00000575397 LGR6Q9HBX8 967 aa12.35□□□□□ -0.43
RFWD3-211ENST00000575397 ZNF521Q96K83 1311 aa12.35□□□□□ -0.43
RFWD3-211ENST00000575397 H0YIN7 160 aa12.34□□□□□ -0.43
RFWD3-211ENST00000575397 FOXN1O15353 648 aa12.34□□□□□ -0.43
RFWD3-211ENST00000575397 C21orf2O43822 256 aa12.34□□□□□ -0.43
RFWD3-211ENST00000575397 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
RFWD3-211ENST00000575397 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.34□□□□□ -0.43
RFWD3-211ENST00000575397 ZNF622Q969S3 477 aaKnown RBP eCLIP12.34□□□□□ -0.43
RFWD3-211ENST00000575397 SLC52A2Q9HAB3 445 aa12.34□□□□□ -0.43
RFWD3-211ENST00000575397 TCERG1O14776 1098 aaKnown RBP12.33□□□□□ -0.44
RFWD3-211ENST00000575397 CANXP27824 592 aaKnown RBP12.33□□□□□ -0.44
RFWD3-211ENST00000575397 ERFEQ4G0M1 354 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms