RNA–Protein interactions for RNA: ENST00000574997.1

TRIM25-209, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-209ENST00000574997 NPC1L1Q9UHC9 1359 aa8.73□□□□□ -1.01
TRIM25-209ENST00000574997 C9orf131Q5VYM1 1079 aa8.73□□□□□ -1.01
TRIM25-209ENST00000574997 USPL1Q5W0Q7 1092 aa8.73□□□□□ -1.01
TRIM25-209ENST00000574997 NPM2Q86SE8 214 aaKnown RBP8.73□□□□□ -1.01
TRIM25-209ENST00000574997 DNAJC10Q8IXB1 793 aa8.73□□□□□ -1.01
TRIM25-209ENST00000574997 TTC5Q8N0Z6 440 aa8.73□□□□□ -1.01
TRIM25-209ENST00000574997 GAS2L2Q8NHY3 880 aa8.73□□□□□ -1.01
TRIM25-209ENST00000574997 LGR6Q9HBX8 967 aa8.73□□□□□ -1.01
TRIM25-209ENST00000574997 SOS1Q07889 1333 aaPredicted RBP8.73□□□□□ -1.01
TRIM25-209ENST00000574997 DDR1Q08345 913 aa8.72□□□□□ -1.01
TRIM25-209ENST00000574997 MTHFSDQ2M296 383 aaKnown RBP8.72□□□□□ -1.01
TRIM25-209ENST00000574997 DNAJC5GQ8N7S2 189 aa8.72□□□□□ -1.01
TRIM25-209ENST00000574997 SRP68Q9UHB9 627 aaKnown RBP8.72□□□□□ -1.01
TRIM25-209ENST00000574997 MRC1P22897 1456 aa8.71□□□□□ -1.01
TRIM25-209ENST00000574997 GNAT3A8MTJ3 354 aa8.71□□□□□ -1.02
TRIM25-209ENST00000574997 H0YIN7 160 aa8.71□□□□□ -1.02
TRIM25-209ENST00000574997 SERPINB2P05120 415 aa8.71□□□□□ -1.02
TRIM25-209ENST00000574997 PDE6BP35913 854 aa8.71□□□□□ -1.02
TRIM25-209ENST00000574997 EIF5P55010 431 aaKnown RBP8.71□□□□□ -1.02
TRIM25-209ENST00000574997 HTRA3P83110 453 aa8.71□□□□□ -1.02
TRIM25-209ENST00000574997 TEFQ10587 303 aa8.71□□□□□ -1.02
TRIM25-209ENST00000574997 NFIXQ14938 502 aa8.71□□□□□ -1.02
TRIM25-209ENST00000574997 TTLL6Q8N841 843 aa8.71□□□□□ -1.02
TRIM25-209ENST00000574997 NMRK2Q9NPI5 230 aa8.71□□□□□ -1.02
TRIM25-209ENST00000574997 RNF181Q9P0P0 153 aa8.71□□□□□ -1.02
TRIM25-209ENST00000574997 KIF7Q2M1P5 1343 aa8.71□□□□□ -1.02
TRIM25-209ENST00000574997 COL15A1P39059 1388 aa8.71□□□□□ -1.02
TRIM25-209ENST00000574997 TJP1Q07157 1748 aa8.71□□□□□ -1.02
TRIM25-209ENST00000574997 RGL2O15211 777 aa8.7□□□□□ -1.02
TRIM25-209ENST00000574997 CAPN15O75808 1086 aa8.7□□□□□ -1.02
TRIM25-209ENST00000574997 HMOX1P09601 288 aa8.7□□□□□ -1.02
TRIM25-209ENST00000574997 VEGFAP15692 232 aaPredicted RBP8.7□□□□□ -1.02
TRIM25-209ENST00000574997 LMNB1P20700 586 aa8.7□□□□□ -1.02
TRIM25-209ENST00000574997 IL6STP40189 918 aaPredicted RBP8.7□□□□□ -1.02
TRIM25-209ENST00000574997 SLC39A6Q13433 755 aa8.7□□□□□ -1.02
TRIM25-209ENST00000574997 DPY19L2Q6NUT2 758 aa8.7□□□□□ -1.02
TRIM25-209ENST00000574997 ZNF790Q6PG37 636 aa8.7□□□□□ -1.02
TRIM25-209ENST00000574997 SMC1BQ8NDV3 1235 aa8.7□□□□□ -1.02
TRIM25-209ENST00000574997 CFAP53Q96M91 514 aa8.7□□□□□ -1.02
TRIM25-209ENST00000574997 BRIP1Q9BX63 1249 aa8.7□□□□□ -1.02
TRIM25-209ENST00000574997 NUDCQ9Y266 331 aa8.7□□□□□ -1.02
TRIM25-209ENST00000574997 ADAMTS7Q9UKP4 1686 aa8.69□□□□□ -1.02
TRIM25-209ENST00000574997 SBF1O95248 1867 aa8.69□□□□□ -1.02
TRIM25-209ENST00000574997 GLTPD2A6NH11 291 aa8.69□□□□□ -1.02
TRIM25-209ENST00000574997 CHRNA5P30532 468 aa8.69□□□□□ -1.02
TRIM25-209ENST00000574997 COL13A1Q5TAT6 717 aaPredicted RBP8.69□□□□□ -1.02
TRIM25-209ENST00000574997 SOGA3Q5TF21 947 aa8.69□□□□□ -1.02
TRIM25-209ENST00000574997 FMNL2Q96PY5 1086 aa8.69□□□□□ -1.02
TRIM25-209ENST00000574997 ZBTB1Q9Y2K1 713 aa8.69□□□□□ -1.02
TRIM25-209ENST00000574997 CANXP27824 592 aaKnown RBP8.68□□□□□ -1.02
TRIM25-209ENST00000574997 CC2D1BQ5T0F9 858 aaKnown RBP8.68□□□□□ -1.02
TRIM25-209ENST00000574997 CLEC4GQ6UXB4 293 aa8.68□□□□□ -1.02
TRIM25-209ENST00000574997 C2CD5Q86YS7 1000 aa8.68□□□□□ -1.02
TRIM25-209ENST00000574997 JMYQ8N9B5 988 aa8.68□□□□□ -1.02
TRIM25-209ENST00000574997 SETDB2Q96T68 719 aa8.68□□□□□ -1.02
TRIM25-209ENST00000574997 RRAGCQ9HB90 399 aa8.68□□□□□ -1.02
TRIM25-209ENST00000574997 HEG1Q9ULI3 1381 aa8.68□□□□□ -1.02
TRIM25-209ENST00000574997 KCPQ6ZWJ8 1503 aa8.68□□□□□ -1.02
TRIM25-209ENST00000574997 NRXN2Q9P2S2 1712 aa8.68□□□□□ -1.02
TRIM25-209ENST00000574997 VIRMAQ69YN4 1812 aaKnown RBP8.68□□□□□ -1.02
TRIM25-209ENST00000574997 U2SURPO15042 1029 aaKnown RBP8.67□□□□□ -1.02
TRIM25-209ENST00000574997 HTATSF1O43719 755 aaKnown RBP8.67□□□□□ -1.02
TRIM25-209ENST00000574997 IL17REQ8NFR9 667 aa8.67□□□□□ -1.02
TRIM25-209ENST00000574997 CNKSR1Q969H4 720 aa8.67□□□□□ -1.02
TRIM25-209ENST00000574997 KLRG1Q96E93 195 aa8.67□□□□□ -1.02
TRIM25-209ENST00000574997 ZNF496Q96IT1 587 aaPredicted RBP8.67□□□□□ -1.02
TRIM25-209ENST00000574997 BCL2L12Q9HB09 334 aa8.67□□□□□ -1.02
TRIM25-209ENST00000574997 TNRC6CQ9HCJ0 1690 aaKnown RBP8.67□□□□□ -1.02
TRIM25-209ENST00000574997 AFDNP55196 1824 aaKnown RBP8.66□□□□□ -1.02
TRIM25-209ENST00000574997 UBR2Q8IWV8 1755 aa8.66□□□□□ -1.02
TRIM25-209ENST00000574997 CARMIL3Q8ND23 1372 aa8.66□□□□□ -1.02
TRIM25-209ENST00000574997 CEMIPQ8WUJ3 1361 aa8.66□□□□□ -1.02
TRIM25-209ENST00000574997 LTBP3Q9NS15 1303 aa8.66□□□□□ -1.02
TRIM25-209ENST00000574997 BTBD11A6QL63 1104 aa8.66□□□□□ -1.02
TRIM25-209ENST00000574997 ST5P78524 1137 aa8.66□□□□□ -1.02
TRIM25-209ENST00000574997 RTF1Q92541 710 aaKnown RBP8.66□□□□□ -1.02
TRIM25-209ENST00000574997 ZNF652Q9Y2D9 606 aa8.66□□□□□ -1.02
TRIM25-209ENST00000574997 DLEC1Q9Y238 1755 aa8.66□□□□□ -1.02
TRIM25-209ENST00000574997 NPHP1O15259 732 aa8.65□□□□□ -1.02
TRIM25-209ENST00000574997 SNRPA1P09661 255 aaKnown RBP8.65□□□□□ -1.02
TRIM25-209ENST00000574997 STYK1Q6J9G0 422 aa8.65□□□□□ -1.02
TRIM25-209ENST00000574997 ZNF622Q969S3 477 aaKnown RBP eCLIP8.65□□□□□ -1.02
TRIM25-209ENST00000574997 NEFMP07197 916 aa8.64□□□□□ -1.03
TRIM25-209ENST00000574997 TBC1D9BQ66K14 1250 aa8.64□□□□□ -1.03
TRIM25-209ENST00000574997 TPTE2Q6XPS3 522 aa8.64□□□□□ -1.03
TRIM25-209ENST00000574997 TNS4Q8IZW8 715 aa8.64□□□□□ -1.03
TRIM25-209ENST00000574997 CNBD1Q8NA66 436 aa8.64□□□□□ -1.03
TRIM25-209ENST00000574997 MASTLQ96GX5 879 aa8.64□□□□□ -1.03
TRIM25-209ENST00000574997 PNNQ9H307 717 aaKnown RBP8.64□□□□□ -1.03
TRIM25-209ENST00000574997 TBC1D2BQ9UPU7 963 aa8.64□□□□□ -1.03
TRIM25-209ENST00000574997 IQCA1LA6NCM1 817 aa8.63□□□□□ -1.03
TRIM25-209ENST00000574997 SRGNP10124 158 aa8.63□□□□□ -1.03
TRIM25-209ENST00000574997 ERFEQ4G0M1 354 aa8.63□□□□□ -1.03
TRIM25-209ENST00000574997 GRIPAP1Q4V328 841 aa8.63□□□□□ -1.03
TRIM25-209ENST00000574997 PRR5LQ6MZQ0 368 aa8.63□□□□□ -1.03
TRIM25-209ENST00000574997 BICDL1Q6ZP65 573 aa8.63□□□□□ -1.03
TRIM25-209ENST00000574997 DZIP3Q86Y13 1208 aaKnown RBP8.63□□□□□ -1.03
TRIM25-209ENST00000574997 PNISRQ8TF01 805 aaKnown RBP8.63□□□□□ -1.03
TRIM25-209ENST00000574997 TAOK3Q9H2K8 898 aa8.63□□□□□ -1.03
TRIM25-209ENST00000574997 KLRG2A4D1S0 409 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms