RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 CCDC87Q9NVE4 849 aa21.96■■□□□ 1.11
TMEM88-202ENST00000574668 SRP68Q9UHB9 627 aaKnown RBP21.95■■□□□ 1.1
TMEM88-202ENST00000574668 PARP3Q9Y6F1 533 aa21.95■■□□□ 1.1
TMEM88-202ENST00000574668 MYH14Q7Z406 1995 aaKnown RBP21.95■■□□□ 1.1
TMEM88-202ENST00000574668 CRKLP46109 303 aaKnown RBP21.94■■□□□ 1.1
TMEM88-202ENST00000574668 ARHGAP27Q6ZUM4 889 aa21.94■■□□□ 1.1
TMEM88-202ENST00000574668 GNAT3A8MTJ3 354 aa21.92■■□□□ 1.1
TMEM88-202ENST00000574668 FKBP8Q14318 412 aa21.92■■□□□ 1.1
TMEM88-202ENST00000574668 NFE2L2Q16236 605 aa21.92■■□□□ 1.1
TMEM88-202ENST00000574668 TJP1Q07157 1748 aa21.92■■□□□ 1.1
TMEM88-202ENST00000574668 KCNA3P22001 575 aa21.91■■□□□ 1.1
TMEM88-202ENST00000574668 RTF1Q92541 710 aaKnown RBP21.91■■□□□ 1.1
TMEM88-202ENST00000574668 DDR1Q08345 913 aa21.9■■□□□ 1.1
TMEM88-202ENST00000574668 USP42Q9H9J4 1324 aaKnown RBP21.89■■□□□ 1.1
TMEM88-202ENST00000574668 RNMTO43148 476 aaKnown RBP21.89■■□□□ 1.09
TMEM88-202ENST00000574668 INTS5Q6P9B9 1019 aaKnown RBP21.89■■□□□ 1.09
TMEM88-202ENST00000574668 IFFO2Q5TF58 517 aa21.88■■□□□ 1.09
TMEM88-202ENST00000574668 LGR6Q9HBX8 967 aa21.88■■□□□ 1.09
TMEM88-202ENST00000574668 HTATSF1O43719 755 aaKnown RBP21.87■■□□□ 1.09
TMEM88-202ENST00000574668 TMPOP42166 694 aaKnown RBP21.87■■□□□ 1.09
TMEM88-202ENST00000574668 RIPK4P57078 832 aa21.87■■□□□ 1.09
TMEM88-202ENST00000574668 NEUROD2Q15784 382 aa21.87■■□□□ 1.09
TMEM88-202ENST00000574668 DNAJC10Q8IXB1 793 aa21.87■■□□□ 1.09
TMEM88-202ENST00000574668 NMRK2Q9NPI5 230 aa21.87■■□□□ 1.09
TMEM88-202ENST00000574668 RRP7AQ9Y3A4 280 aaKnown RBP21.87■■□□□ 1.09
TMEM88-202ENST00000574668 BRCA1P38398 1863 aaKnown RBP21.87■■□□□ 1.09
TMEM88-202ENST00000574668 APAF1O14727 1248 aa21.86■■□□□ 1.09
TMEM88-202ENST00000574668 SCN11AQ9UI33 1791 aa21.86■■□□□ 1.09
TMEM88-202ENST00000574668 CHRNA5P30532 468 aa21.85■■□□□ 1.09
TMEM88-202ENST00000574668 LMOD3Q0VAK6 560 aa21.85■■□□□ 1.09
TMEM88-202ENST00000574668 SLC39A6Q13433 755 aa21.85■■□□□ 1.09
TMEM88-202ENST00000574668 C9orf131Q5VYM1 1079 aa21.85■■□□□ 1.09
TMEM88-202ENST00000574668 SLC52A2Q9HAB3 445 aa21.85■■□□□ 1.09
TMEM88-202ENST00000574668 PIM2Q9P1W9 311 aa21.85■■□□□ 1.09
TMEM88-202ENST00000574668 ADAMTS7Q9UKP4 1686 aa21.85■■□□□ 1.09
TMEM88-202ENST00000574668 TEFQ10587 303 aa21.84■■□□□ 1.09
TMEM88-202ENST00000574668 IL17REQ8NFR9 667 aa21.84■■□□□ 1.09
TMEM88-202ENST00000574668 POLRMTO00411 1230 aaKnown RBP21.83■■□□□ 1.09
TMEM88-202ENST00000574668 DALRD3Q5D0E6 543 aaKnown RBP21.83■■□□□ 1.09
TMEM88-202ENST00000574668 USPL1Q5W0Q7 1092 aa21.83■■□□□ 1.09
TMEM88-202ENST00000574668 MCM10Q7L590 875 aa21.83■■□□□ 1.09
TMEM88-202ENST00000574668 TOMM70O94826 608 aa21.82■■□□□ 1.08
TMEM88-202ENST00000574668 TM4SF1P30408 202 aa21.82■■□□□ 1.08
TMEM88-202ENST00000574668 DCTN1Q14203 1278 aa21.82■■□□□ 1.08
TMEM88-202ENST00000574668 SOS1Q07889 1333 aaPredicted RBP21.81■■□□□ 1.08
TMEM88-202ENST00000574668 ARFGEF1Q9Y6D6 1849 aa21.8■■□□□ 1.08
TMEM88-202ENST00000574668 MRC1P22897 1456 aa21.8■■□□□ 1.08
TMEM88-202ENST00000574668 ZPR1O75312 459 aa21.8■■□□□ 1.08
TMEM88-202ENST00000574668 CYP19A1P11511 503 aaPredicted RBP21.8■■□□□ 1.08
TMEM88-202ENST00000574668 KCPQ6ZWJ8 1503 aa21.8■■□□□ 1.08
TMEM88-202ENST00000574668 ZBTB1Q9Y2K1 713 aa21.79■■□□□ 1.08
TMEM88-202ENST00000574668 APLP1P51693 650 aa21.78■■□□□ 1.08
TMEM88-202ENST00000574668 RNF181Q9P0P0 153 aa21.78■■□□□ 1.08
TMEM88-202ENST00000574668 CEMIPQ8WUJ3 1361 aa21.77■■□□□ 1.08
TMEM88-202ENST00000574668 NFIXQ14938 502 aa21.77■■□□□ 1.08
TMEM88-202ENST00000574668 COL15A1P39059 1388 aa21.76■■□□□ 1.07
TMEM88-202ENST00000574668 THUMPD2Q9BTF0 503 aaKnown RBP21.76■■□□□ 1.07
TMEM88-202ENST00000574668 BCL2L12Q9HB09 334 aa21.76■■□□□ 1.07
TMEM88-202ENST00000574668 NARFQ9UHQ1 456 aa21.76■■□□□ 1.07
TMEM88-202ENST00000574668 DLG5Q8TDM6 1919 aa21.75■■□□□ 1.07
TMEM88-202ENST00000574668 DNAJC5GQ8N7S2 189 aa21.75■■□□□ 1.07
TMEM88-202ENST00000574668 TRIM35Q9UPQ4 493 aa21.75■■□□□ 1.07
TMEM88-202ENST00000574668 SALL2Q9Y467 1007 aaPredicted RBP21.75■■□□□ 1.07
TMEM88-202ENST00000574668 BTBD11A6QL63 1104 aa21.74■■□□□ 1.07
TMEM88-202ENST00000574668 RASSF7Q02833 373 aa21.74■■□□□ 1.07
TMEM88-202ENST00000574668 TAF7Q15545 349 aaPredicted RBP21.74■■□□□ 1.07
TMEM88-202ENST00000574668 CANXP27824 592 aaKnown RBP21.73■■□□□ 1.07
TMEM88-202ENST00000574668 HTRA3P83110 453 aa21.73■■□□□ 1.07
TMEM88-202ENST00000574668 TTC5Q8N0Z6 440 aa21.73■■□□□ 1.07
TMEM88-202ENST00000574668 RBM46Q8TBY0 533 aaKnown RBP21.73■■□□□ 1.07
TMEM88-202ENST00000574668 VIRMAQ69YN4 1812 aaKnown RBP21.73■■□□□ 1.07
TMEM88-202ENST00000574668 C16orf71Q8IYS4 520 aaPredicted RBP21.72■■□□□ 1.07
TMEM88-202ENST00000574668 NGEFQ8N5V2 710 aa21.72■■□□□ 1.07
TMEM88-202ENST00000574668 RRAGCQ9HB90 399 aa21.72■■□□□ 1.07
TMEM88-202ENST00000574668 AFDNP55196 1824 aaKnown RBP21.71■■□□□ 1.07
TMEM88-202ENST00000574668 SERPINB2P05120 415 aa21.71■■□□□ 1.07
TMEM88-202ENST00000574668 CALD1Q05682 793 aaKnown RBP21.71■■□□□ 1.07
TMEM88-202ENST00000574668 NCBP3Q53F19 620 aaKnown RBP21.71■■□□□ 1.07
TMEM88-202ENST00000574668 VSIG10Q8N0Z9 540 aa21.71■■□□□ 1.07
TMEM88-202ENST00000574668 KDM2BQ8NHM5 1336 aa21.71■■□□□ 1.07
TMEM88-202ENST00000574668 CARMIL3Q8ND23 1372 aa21.71■■□□□ 1.07
TMEM88-202ENST00000574668 NRXN2Q9P2S2 1712 aa21.7■■□□□ 1.06
TMEM88-202ENST00000574668 CCDC27Q2M243 656 aa21.7■■□□□ 1.06
TMEM88-202ENST00000574668 BICDL1Q6ZP65 573 aa21.7■■□□□ 1.06
TMEM88-202ENST00000574668 PRELPP51888 382 aa21.69■■□□□ 1.06
TMEM88-202ENST00000574668 LAS1LQ9Y4W2 734 aaKnown RBP21.69■■□□□ 1.06
TMEM88-202ENST00000574668 UBR2Q8IWV8 1755 aa21.69■■□□□ 1.06
TMEM88-202ENST00000574668 ZNF790Q6PG37 636 aa21.68■■□□□ 1.06
TMEM88-202ENST00000574668 MIS18AQ9NYP9 233 aa21.68■■□□□ 1.06
TMEM88-202ENST00000574668 WDR90Q96KV7 1748 aa21.68■■□□□ 1.06
TMEM88-202ENST00000574668 SBF1O95248 1867 aa21.68■■□□□ 1.06
TMEM88-202ENST00000574668 C2CD5Q86YS7 1000 aa21.67■■□□□ 1.06
TMEM88-202ENST00000574668 WWC1Q8IX03 1113 aa21.67■■□□□ 1.06
TMEM88-202ENST00000574668 ZNF496Q96IT1 587 aaPredicted RBP21.67■■□□□ 1.06
TMEM88-202ENST00000574668 TSPYL4Q9UJ04 414 aa21.67■■□□□ 1.06
TMEM88-202ENST00000574668 EIF5P55010 431 aaKnown RBP21.66■■□□□ 1.06
TMEM88-202ENST00000574668 FSTL1Q12841 308 aa21.65■■□□□ 1.06
TMEM88-202ENST00000574668 TTLL6Q8N841 843 aa21.65■■□□□ 1.06
TMEM88-202ENST00000574668 BABAM1Q9NWV8 329 aa21.65■■□□□ 1.06
TMEM88-202ENST00000574668 ZNF330Q9Y3S2 320 aaPredicted RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 213.5 ms