RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 TTC5Q8N0Z6 440 aa25.97■■□□□ 1.75
HCFC1R1-204ENST00000573095 SCN7AQ01118 1682 aa25.96■■□□□ 1.75
HCFC1R1-204ENST00000573095 POLRMTO00411 1230 aaKnown RBP25.96■■□□□ 1.75
HCFC1R1-204ENST00000573095 TM4SF1P30408 202 aa25.96■■□□□ 1.75
HCFC1R1-204ENST00000573095 TEFQ10587 303 aa25.96■■□□□ 1.75
HCFC1R1-204ENST00000573095 USPL1Q5W0Q7 1092 aa25.96■■□□□ 1.75
HCFC1R1-204ENST00000573095 IL17REQ8NFR9 667 aa25.96■■□□□ 1.75
HCFC1R1-204ENST00000573095 RSPH6AQ9H0K4 717 aa25.96■■□□□ 1.75
HCFC1R1-204ENST00000573095 NARFQ9UHQ1 456 aa25.96■■□□□ 1.75
HCFC1R1-204ENST00000573095 KCNA3P22001 575 aa25.95■■□□□ 1.74
HCFC1R1-204ENST00000573095 HEG1Q9ULI3 1381 aa25.95■■□□□ 1.74
HCFC1R1-204ENST00000573095 PRKAR2BP31323 418 aa25.94■■□□□ 1.74
HCFC1R1-204ENST00000573095 DLEC1Q9Y238 1755 aa25.94■■□□□ 1.74
HCFC1R1-204ENST00000573095 FCHSD2O94868 740 aa25.93■■□□□ 1.74
HCFC1R1-204ENST00000573095 PPP2R1AP30153 589 aa25.93■■□□□ 1.74
HCFC1R1-204ENST00000573095 ZNF790Q6PG37 636 aa25.93■■□□□ 1.74
HCFC1R1-204ENST00000573095 ZNF496Q96IT1 587 aaPredicted RBP25.92■■□□□ 1.74
HCFC1R1-204ENST00000573095 NUDCQ9Y266 331 aa25.92■■□□□ 1.74
HCFC1R1-204ENST00000573095 STARD3NLO95772 234 aa25.91■■□□□ 1.74
HCFC1R1-204ENST00000573095 ZNF526Q8TF50 670 aaPredicted RBP25.91■■□□□ 1.74
HCFC1R1-204ENST00000573095 PHACTR3Q96KR7 559 aa25.91■■□□□ 1.74
HCFC1R1-204ENST00000573095 NFIXQ14938 502 aa25.9■■□□□ 1.74
HCFC1R1-204ENST00000573095 BCL2L12Q9HB09 334 aa25.9■■□□□ 1.74
HCFC1R1-204ENST00000573095 PIM2Q9P1W9 311 aa25.9■■□□□ 1.74
HCFC1R1-204ENST00000573095 CANXP27824 592 aaKnown RBP25.88■■□□□ 1.73
HCFC1R1-204ENST00000573095 EIF5P55010 431 aaKnown RBP25.88■■□□□ 1.73
HCFC1R1-204ENST00000573095 ARHGAP27Q6ZUM4 889 aa25.88■■□□□ 1.73
HCFC1R1-204ENST00000573095 TEX13AQ9BXU3 409 aaPredicted RBP25.88■■□□□ 1.73
HCFC1R1-204ENST00000573095 BCORQ6W2J9 1755 aa25.87■■□□□ 1.73
HCFC1R1-204ENST00000573095 DALRD3Q5D0E6 543 aaKnown RBP25.87■■□□□ 1.73
HCFC1R1-204ENST00000573095 U2AF1L5P0DN76 240 aaPredicted RBP25.86■■□□□ 1.73
HCFC1R1-204ENST00000573095 CHRNA5P30532 468 aa25.86■■□□□ 1.73
HCFC1R1-204ENST00000573095 U2AF1Q01081 240 aaKnown RBP eCLIP25.86■■□□□ 1.73
HCFC1R1-204ENST00000573095 FMNL2Q96PY5 1086 aa25.86■■□□□ 1.73
HCFC1R1-204ENST00000573095 A0A087WZG4 1122 aa25.85■■□□□ 1.73
HCFC1R1-204ENST00000573095 BTBD11A6QL63 1104 aa25.83■■□□□ 1.73
HCFC1R1-204ENST00000573095 SERPINB2P05120 415 aa25.83■■□□□ 1.73
HCFC1R1-204ENST00000573095 SBF1O95248 1867 aa25.83■■□□□ 1.72
HCFC1R1-204ENST00000573095 ANKRD31Q8N7Z5 1873 aa25.83■■□□□ 1.72
HCFC1R1-204ENST00000573095 KIF3CO14782 793 aa25.82■■□□□ 1.72
HCFC1R1-204ENST00000573095 IL6STP40189 918 aaPredicted RBP25.82■■□□□ 1.72
HCFC1R1-204ENST00000573095 CARMIL3Q8ND23 1372 aa25.81■■□□□ 1.72
HCFC1R1-204ENST00000573095 DLG5Q8TDM6 1919 aa25.8■■□□□ 1.72
HCFC1R1-204ENST00000573095 KCNQ3O43525 872 aa25.8■■□□□ 1.72
HCFC1R1-204ENST00000573095 RTF1Q92541 710 aaKnown RBP25.79■■□□□ 1.72
HCFC1R1-204ENST00000573095 LAMB4A4D0S4 1761 aa25.79■■□□□ 1.72
HCFC1R1-204ENST00000573095 COL11A2P13942 1736 aaPredicted RBP25.78■■□□□ 1.72
HCFC1R1-204ENST00000573095 C9orf131Q5VYM1 1079 aa25.78■■□□□ 1.72
HCFC1R1-204ENST00000573095 HTATSF1O43719 755 aaKnown RBP25.77■■□□□ 1.72
HCFC1R1-204ENST00000573095 MCM10Q7L590 875 aa25.77■■□□□ 1.72
HCFC1R1-204ENST00000573095 ZNF330Q9Y3S2 320 aaPredicted RBP25.77■■□□□ 1.72
HCFC1R1-204ENST00000573095 A1BGP04217 495 aa25.76■■□□□ 1.71
HCFC1R1-204ENST00000573095 TBC1D9BQ66K14 1250 aa25.76■■□□□ 1.71
HCFC1R1-204ENST00000573095 BICDL1Q6ZP65 573 aa25.76■■□□□ 1.71
HCFC1R1-204ENST00000573095 KDM3BQ7LBC6 1761 aa25.76■■□□□ 1.71
HCFC1R1-204ENST00000573095 TNRC6CQ9HCJ0 1690 aaKnown RBP25.75■■□□□ 1.71
HCFC1R1-204ENST00000573095 HSPA6P17066 643 aa25.75■■□□□ 1.71
HCFC1R1-204ENST00000573095 TBC1D2BQ9UPU7 963 aa25.75■■□□□ 1.71
HCFC1R1-204ENST00000573095 CAMTA2O94983 1202 aa25.74■■□□□ 1.71
HCFC1R1-204ENST00000573095 NPM2Q86SE8 214 aaKnown RBP25.74■■□□□ 1.71
HCFC1R1-204ENST00000573095 C2CD5Q86YS7 1000 aa25.73■■□□□ 1.71
HCFC1R1-204ENST00000573095 RNF181Q9P0P0 153 aa25.73■■□□□ 1.71
HCFC1R1-204ENST00000573095 TIAM2Q8IVF5 1701 aa25.72■■□□□ 1.71
HCFC1R1-204ENST00000573095 SNRPA1P09661 255 aaKnown RBP25.72■■□□□ 1.71
HCFC1R1-204ENST00000573095 DCTN1Q14203 1278 aa25.72■■□□□ 1.71
HCFC1R1-204ENST00000573095 USP16Q9Y5T5 823 aa25.72■■□□□ 1.71
HCFC1R1-204ENST00000573095 PRAMEF22A3QJZ6 481 aa25.71■■□□□ 1.71
HCFC1R1-204ENST00000573095 H0YIN7 160 aa25.71■■□□□ 1.71
HCFC1R1-204ENST00000573095 PRR5LQ6MZQ0 368 aa25.71■■□□□ 1.71
HCFC1R1-204ENST00000573095 TTLL6Q8N841 843 aa25.71■■□□□ 1.71
HCFC1R1-204ENST00000573095 NMRK2Q9NPI5 230 aa25.71■■□□□ 1.71
HCFC1R1-204ENST00000573095 PDZRN3Q9UPQ7 1066 aa25.71■■□□□ 1.71
HCFC1R1-204ENST00000573095 ARFGEF2Q9Y6D5 1785 aa25.71■■□□□ 1.71
HCFC1R1-204ENST00000573095 ZC3H4Q9UPT8 1303 aaKnown RBP25.7■■□□□ 1.71
HCFC1R1-204ENST00000573095 TOMM70O94826 608 aa25.7■■□□□ 1.7
HCFC1R1-204ENST00000573095 DZIP3Q86Y13 1208 aaKnown RBP25.7■■□□□ 1.7
HCFC1R1-204ENST00000573095 BRIP1Q9BX63 1249 aa25.69■■□□□ 1.7
HCFC1R1-204ENST00000573095 CCDC88AQ3V6T2 1871 aa25.68■■□□□ 1.7
HCFC1R1-204ENST00000573095 CEP350Q5VT06 3117 aa25.68■■□□□ 1.7
HCFC1R1-204ENST00000573095 NEFMP07197 916 aa25.68■■□□□ 1.7
HCFC1R1-204ENST00000573095 RASSF7Q02833 373 aa25.68■■□□□ 1.7
HCFC1R1-204ENST00000573095 KDM2BQ8NHM5 1336 aa25.67■■□□□ 1.7
HCFC1R1-204ENST00000573095 PDE6BP35913 854 aa25.67■■□□□ 1.7
HCFC1R1-204ENST00000573095 PIP4K2AP48426 406 aaPredicted RBP25.67■■□□□ 1.7
HCFC1R1-204ENST00000573095 CACNA1SQ13698 1873 aa25.67■■□□□ 1.7
HCFC1R1-204ENST00000573095 TAF7Q15545 349 aaPredicted RBP25.67■■□□□ 1.7
HCFC1R1-204ENST00000573095 FER1L6Q2WGJ9 1857 aa25.67■■□□□ 1.7
HCFC1R1-204ENST00000573095 CNBD1Q8NA66 436 aa25.67■■□□□ 1.7
HCFC1R1-204ENST00000573095 PLEKHF1Q96S99 279 aa25.67■■□□□ 1.7
HCFC1R1-204ENST00000573095 SETDB2Q96T68 719 aa25.67■■□□□ 1.7
HCFC1R1-204ENST00000573095 RGL2O15211 777 aa25.65■■□□□ 1.7
HCFC1R1-204ENST00000573095 CLEC4GQ6UXB4 293 aa25.65■■□□□ 1.7
HCFC1R1-204ENST00000573095 LMNB1P20700 586 aa25.64■■□□□ 1.7
HCFC1R1-204ENST00000573095 ZNF652Q9Y2D9 606 aa25.64■■□□□ 1.7
HCFC1R1-204ENST00000573095 DICER1Q9UPY3 1922 aaKnown RBP25.64■■□□□ 1.69
HCFC1R1-204ENST00000573095 NBPF26B4DH59 902 aa25.63■■□□□ 1.69
HCFC1R1-204ENST00000573095 ST5P78524 1137 aa25.63■■□□□ 1.69
HCFC1R1-204ENST00000573095 NBPF10Q6P3W6 841 aaKnown RBP25.63■■□□□ 1.69
HCFC1R1-204ENST00000573095 NBPF15Q8N660 670 aa25.63■■□□□ 1.69
HCFC1R1-204ENST00000573095 NFKBIEO00221 500 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms