RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 POLKQ9UBT6 870 aa11.97□□□□□ -0.49
SMG1-216ENST00000569122 ARFGEF1Q9Y6D6 1849 aa11.97□□□□□ -0.49
SMG1-216ENST00000569122 TMEM88BA6NKF7 163 aa11.96□□□□□ -0.49
SMG1-216ENST00000569122 SERPINB2P05120 415 aa11.96□□□□□ -0.49
SMG1-216ENST00000569122 EIF4A2Q14240 407 aaKnown RBP11.96□□□□□ -0.49
SMG1-216ENST00000569122 SOGA3Q5TF21 947 aa11.96□□□□□ -0.49
SMG1-216ENST00000569122 INTS5Q6P9B9 1019 aaKnown RBP11.96□□□□□ -0.49
SMG1-216ENST00000569122 LDHDQ86WU2 507 aa11.96□□□□□ -0.49
SMG1-216ENST00000569122 NFATC2IPQ8NCF5 419 aa11.96□□□□□ -0.49
SMG1-216ENST00000569122 WBP1LQ9NX94 342 aa11.96□□□□□ -0.49
SMG1-216ENST00000569122 NARFQ9UHQ1 456 aa11.96□□□□□ -0.49
SMG1-216ENST00000569122 ZNF831Q5JPB2 1677 aa11.96□□□□□ -0.5
SMG1-216ENST00000569122 NFKBIEO00221 500 aa11.95□□□□□ -0.5
SMG1-216ENST00000569122 PDE6BP35913 854 aa11.95□□□□□ -0.5
SMG1-216ENST00000569122 MAP2K1Q02750 393 aaPredicted RBP11.95□□□□□ -0.5
SMG1-216ENST00000569122 NFIXQ14938 502 aa11.95□□□□□ -0.5
SMG1-216ENST00000569122 CARD14Q9BXL6 1004 aa11.95□□□□□ -0.5
SMG1-216ENST00000569122 LTBP3Q9NS15 1303 aa11.94□□□□□ -0.5
SMG1-216ENST00000569122 LBX1P52954 281 aa11.94□□□□□ -0.5
SMG1-216ENST00000569122 MLLT1Q03111 559 aaPredicted RBP11.94□□□□□ -0.5
SMG1-216ENST00000569122 FAM161AQ3B820 660 aa11.94□□□□□ -0.5
SMG1-216ENST00000569122 ZNF622Q969S3 477 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMG1-216ENST00000569122 ABHD8Q96I13 439 aa11.94□□□□□ -0.5
SMG1-216ENST00000569122 SOS1Q07889 1333 aaPredicted RBP11.93□□□□□ -0.5
SMG1-216ENST00000569122 A0A087WZG4 1122 aa11.93□□□□□ -0.5
SMG1-216ENST00000569122 VEGFBP49765 207 aa11.93□□□□□ -0.5
SMG1-216ENST00000569122 BRIP1Q9BX63 1249 aa11.93□□□□□ -0.5
SMG1-216ENST00000569122 TAOK3Q9H2K8 898 aa11.93□□□□□ -0.5
SMG1-216ENST00000569122 BRCA1P38398 1863 aaKnown RBP11.93□□□□□ -0.5
SMG1-216ENST00000569122 PASKQ96RG2 1323 aa11.92□□□□□ -0.5
SMG1-216ENST00000569122 C21orf2O43822 256 aa11.92□□□□□ -0.5
SMG1-216ENST00000569122 DEFB115Q30KQ5 88 aa11.92□□□□□ -0.5
SMG1-216ENST00000569122 CNKSR1Q969H4 720 aa11.92□□□□□ -0.5
SMG1-216ENST00000569122 BEGAINQ9BUH8 593 aa11.92□□□□□ -0.5
SMG1-216ENST00000569122 DDNO94850 711 aaPredicted RBP11.91□□□□□ -0.5
SMG1-216ENST00000569122 CYP19A1P11511 503 aaPredicted RBP11.91□□□□□ -0.5
SMG1-216ENST00000569122 DNAJC10Q8IXB1 793 aa11.91□□□□□ -0.5
SMG1-216ENST00000569122 VSIG10Q8N0Z9 540 aa11.91□□□□□ -0.5
SMG1-216ENST00000569122 L3MBTL3Q96JM7 780 aaPredicted RBP11.91□□□□□ -0.5
SMG1-216ENST00000569122 STARD3NLO95772 234 aa11.9□□□□□ -0.5
SMG1-216ENST00000569122 RGS19P49795 217 aa11.9□□□□□ -0.5
SMG1-216ENST00000569122 NPM2Q86SE8 214 aaKnown RBP11.9□□□□□ -0.5
SMG1-216ENST00000569122 PNMA8AQ86V59 439 aaPredicted RBP11.9□□□□□ -0.5
SMG1-216ENST00000569122 TAF1DQ9H5J8 278 aaPredicted RBP11.9□□□□□ -0.5
SMG1-216ENST00000569122 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
SMG1-216ENST00000569122 COL15A1P39059 1388 aa11.9□□□□□ -0.5
SMG1-216ENST00000569122 RASSF10A6NK89 507 aa11.89□□□□□ -0.51
SMG1-216ENST00000569122 NPHP1O15259 732 aa11.89□□□□□ -0.51
SMG1-216ENST00000569122 HSPA8P11142 646 aaKnown RBP11.89□□□□□ -0.51
SMG1-216ENST00000569122 AKAP4Q5JQC9 854 aa11.89□□□□□ -0.51
SMG1-216ENST00000569122 SLC52A2Q9HAB3 445 aa11.89□□□□□ -0.51
SMG1-216ENST00000569122 CCDC85CA6NKD9 419 aa11.88□□□□□ -0.51
SMG1-216ENST00000569122 ITGBL1O95965 494 aaPredicted RBP11.88□□□□□ -0.51
SMG1-216ENST00000569122 POTEIP0CG38 1075 aa11.88□□□□□ -0.51
SMG1-216ENST00000569122 POTEJP0CG39 1038 aa11.88□□□□□ -0.51
SMG1-216ENST00000569122 TNNT2P45379 298 aaPredicted RBP11.88□□□□□ -0.51
SMG1-216ENST00000569122 STYK1Q6J9G0 422 aa11.88□□□□□ -0.51
SMG1-216ENST00000569122 HACL1Q9UJ83 578 aa11.88□□□□□ -0.51
SMG1-216ENST00000569122 ECE1P42892 770 aa11.87□□□□□ -0.51
SMG1-216ENST00000569122 EAPPQ56P03 285 aaPredicted RBP11.87□□□□□ -0.51
SMG1-216ENST00000569122 BICDL1Q6ZP65 573 aa11.87□□□□□ -0.51
SMG1-216ENST00000569122 TEX13AQ9BXU3 409 aaPredicted RBP11.87□□□□□ -0.51
SMG1-216ENST00000569122 BCL2L12Q9HB09 334 aa11.87□□□□□ -0.51
SMG1-216ENST00000569122 ZNF219Q9P2Y4 722 aaPredicted RBP11.87□□□□□ -0.51
SMG1-216ENST00000569122 SBF1O95248 1867 aa11.87□□□□□ -0.51
SMG1-216ENST00000569122 WDR33Q9C0J8 1336 aaKnown RBP11.86□□□□□ -0.51
SMG1-216ENST00000569122 COL5A3P25940 1745 aaPredicted RBP11.86□□□□□ -0.51
SMG1-216ENST00000569122 ST5P78524 1137 aa11.86□□□□□ -0.51
SMG1-216ENST00000569122 SULT6B1Q6IMI4 303 aa11.86□□□□□ -0.51
SMG1-216ENST00000569122 CNTROBQ8N137 903 aa11.86□□□□□ -0.51
SMG1-216ENST00000569122 MASTLQ96GX5 879 aa11.86□□□□□ -0.51
SMG1-216ENST00000569122 SETDB2Q96T68 719 aa11.86□□□□□ -0.51
SMG1-216ENST00000569122 ABT1Q9ULW3 272 aaKnown RBP11.86□□□□□ -0.51
SMG1-216ENST00000569122 ZBTB1Q9Y2K1 713 aa11.86□□□□□ -0.51
SMG1-216ENST00000569122 CARMIL3Q8ND23 1372 aa11.85□□□□□ -0.51
SMG1-216ENST00000569122 CANXP27824 592 aaKnown RBP11.85□□□□□ -0.51
SMG1-216ENST00000569122 EPHX2P34913 555 aa11.85□□□□□ -0.51
SMG1-216ENST00000569122 EIF5P55010 431 aaKnown RBP11.85□□□□□ -0.51
SMG1-216ENST00000569122 CCDC93Q567U6 631 aa11.85□□□□□ -0.51
SMG1-216ENST00000569122 CA12O43570 354 aa11.84□□□□□ -0.51
SMG1-216ENST00000569122 SRGNP10124 158 aa11.84□□□□□ -0.51
SMG1-216ENST00000569122 PRR5LQ6MZQ0 368 aa11.84□□□□□ -0.51
SMG1-216ENST00000569122 PRPF40BQ6NWY9 871 aaKnown RBP11.84□□□□□ -0.51
SMG1-216ENST00000569122 RTKN2Q8IZC4 609 aa11.84□□□□□ -0.51
SMG1-216ENST00000569122 TTC5Q8N0Z6 440 aa11.84□□□□□ -0.51
SMG1-216ENST00000569122 CNBD1Q8NA66 436 aa11.84□□□□□ -0.51
SMG1-216ENST00000569122 MYH14Q7Z406 1995 aaKnown RBP11.83□□□□□ -0.52
SMG1-216ENST00000569122 RNMTO43148 476 aaKnown RBP11.83□□□□□ -0.52
SMG1-216ENST00000569122 FKBP4Q02790 459 aaKnown RBP eCLIP11.83□□□□□ -0.52
SMG1-216ENST00000569122 SLC39A6Q13433 755 aa11.83□□□□□ -0.52
SMG1-216ENST00000569122 TBC1D9BQ66K14 1250 aa11.83□□□□□ -0.52
SMG1-216ENST00000569122 KIF20BQ96Q89 1820 aa11.83□□□□□ -0.52
SMG1-216ENST00000569122 MAP2K2P36507 400 aa11.82□□□□□ -0.52
SMG1-216ENST00000569122 AEBP1Q8IUX7 1158 aa11.82□□□□□ -0.52
SMG1-216ENST00000569122 GPR101Q96P66 508 aaPredicted RBP11.82□□□□□ -0.52
SMG1-216ENST00000569122 ANKRD26Q9UPS8 1709 aa11.81□□□□□ -0.52
SMG1-216ENST00000569122 NPR1P16066 1061 aa11.81□□□□□ -0.52
SMG1-216ENST00000569122 IL6STP40189 918 aaPredicted RBP11.81□□□□□ -0.52
SMG1-216ENST00000569122 PAXIP1Q6ZW49 1069 aaPredicted RBP11.81□□□□□ -0.52
SMG1-216ENST00000569122 MORC1Q86VD1 984 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms