RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 KCNQ4P56696 695 aa14.12□□□□□ -0.15
LINC00564-201ENST00000567258 TAF1LQ8IZX4 1826 aa14.12□□□□□ -0.15
LINC00564-201ENST00000567258 CYP27B1O15528 508 aa14.11□□□□□ -0.15
LINC00564-201ENST00000567258 EIF4A2Q14240 407 aaKnown RBP14.11□□□□□ -0.15
LINC00564-201ENST00000567258 IFNL2Q8IZJ0 200 aa14.11□□□□□ -0.15
LINC00564-201ENST00000567258 NCAPD2Q15021 1401 aa14.1□□□□□ -0.15
LINC00564-201ENST00000567258 PTGER2P43116 358 aa14.1□□□□□ -0.15
LINC00564-201ENST00000567258 ARXQ96QS3 562 aa14.1□□□□□ -0.15
LINC00564-201ENST00000567258 TOGARAM1Q9Y4F4 1720 aa14.1□□□□□ -0.15
LINC00564-201ENST00000567258 PALLDQ8WX93 1383 aa14.09□□□□□ -0.15
LINC00564-201ENST00000567258 FHDC1Q9C0D6 1143 aaPredicted RBP14.09□□□□□ -0.15
LINC00564-201ENST00000567258 TMOD3Q9NYL9 352 aa14.09□□□□□ -0.15
LINC00564-201ENST00000567258 RIMBP2O15034 1052 aa14.08□□□□□ -0.16
LINC00564-201ENST00000567258 NKX1-1Q15270 411 aaPredicted RBP14.08□□□□□ -0.16
LINC00564-201ENST00000567258 PLEKHO1Q53GL0 409 aaPredicted RBP14.08□□□□□ -0.16
LINC00564-201ENST00000567258 FLAD1Q8NFF5 587 aa14.08□□□□□ -0.16
LINC00564-201ENST00000567258 KIF7Q2M1P5 1343 aa14.08□□□□□ -0.16
LINC00564-201ENST00000567258 PNPLA7Q6ZV29 1317 aa14.08□□□□□ -0.16
LINC00564-201ENST00000567258 PLEKHG2Q9H7P9 1386 aa14.08□□□□□ -0.16
LINC00564-201ENST00000567258 HSP90AB1P08238 724 aaKnown RBP14.07□□□□□ -0.16
LINC00564-201ENST00000567258 PHKG2P15735 406 aa14.07□□□□□ -0.16
LINC00564-201ENST00000567258 YY1P25490 414 aa14.07□□□□□ -0.16
LINC00564-201ENST00000567258 SYT17Q9BSW7 474 aa14.07□□□□□ -0.16
LINC00564-201ENST00000567258 CHD4Q14839 1912 aa14.07□□□□□ -0.16
LINC00564-201ENST00000567258 AMOTQ4VCS5 1084 aa14.06□□□□□ -0.16
LINC00564-201ENST00000567258 PIGBQ92521 554 aa14.06□□□□□ -0.16
LINC00564-201ENST00000567258 AK7Q96M32 723 aa14.06□□□□□ -0.16
LINC00564-201ENST00000567258 IGSF1Q8N6C5 1336 aa14.06□□□□□ -0.16
LINC00564-201ENST00000567258 C1orf141Q5JVX7 400 aa14.05□□□□□ -0.16
LINC00564-201ENST00000567258 MICALL2Q8IY33 904 aa14.05□□□□□ -0.16
LINC00564-201ENST00000567258 C4BP0C0L5 1744 aa14.04□□□□□ -0.16
LINC00564-201ENST00000567258 ZNF530Q6P9A1 599 aaPredicted RBP14.04□□□□□ -0.16
LINC00564-201ENST00000567258 COL24A1Q17RW2 1714 aa14.04□□□□□ -0.16
LINC00564-201ENST00000567258 VARS2Q5ST30 1063 aaKnown RBP14.03□□□□□ -0.16
LINC00564-201ENST00000567258 TMEM92Q6UXU6 159 aa14.03□□□□□ -0.16
LINC00564-201ENST00000567258 DCAF5Q96JK2 942 aa14.03□□□□□ -0.16
LINC00564-201ENST00000567258 UBR3Q6ZT12 1888 aa14.02□□□□□ -0.16
LINC00564-201ENST00000567258 VIRMAQ69YN4 1812 aaKnown RBP14.02□□□□□ -0.16
LINC00564-201ENST00000567258 LOC102724428A0A0B4J2F2 783 aa14.02□□□□□ -0.17
LINC00564-201ENST00000567258 ERVV-2B6SEH9 535 aa14.02□□□□□ -0.17
LINC00564-201ENST00000567258 ATP6V1AP38606 617 aa14.02□□□□□ -0.17
LINC00564-201ENST00000567258 SIK1P57059 783 aa14.02□□□□□ -0.17
LINC00564-201ENST00000567258 AMER1Q5JTC6 1135 aaPredicted RBP14.02□□□□□ -0.17
LINC00564-201ENST00000567258 CC2D1BQ5T0F9 858 aaKnown RBP14.02□□□□□ -0.17
LINC00564-201ENST00000567258 SULT6B1Q6IMI4 303 aa14.02□□□□□ -0.17
LINC00564-201ENST00000567258 COL23A1Q86Y22 540 aaPredicted RBP14.02□□□□□ -0.17
LINC00564-201ENST00000567258 MAP3K5Q99683 1374 aa14.01□□□□□ -0.17
LINC00564-201ENST00000567258 MTHFSP49914 203 aa14.01□□□□□ -0.17
LINC00564-201ENST00000567258 CABP4P57796 275 aa14.01□□□□□ -0.17
LINC00564-201ENST00000567258 CNGB1Q14028 1251 aaPredicted RBP14.01□□□□□ -0.17
LINC00564-201ENST00000567258 GPR162Q16538 588 aa14.01□□□□□ -0.17
LINC00564-201ENST00000567258 ASAP1Q9ULH1 1129 aa14.01□□□□□ -0.17
LINC00564-201ENST00000567258 PHF14O94880 888 aa14□□□□□ -0.17
LINC00564-201ENST00000567258 SCN11AQ9UI33 1791 aa13.99□□□□□ -0.17
LINC00564-201ENST00000567258 MSL1Q68DK7 614 aa13.99□□□□□ -0.17
LINC00564-201ENST00000567258 DIAPH1O60610 1272 aaKnown RBP13.98□□□□□ -0.17
LINC00564-201ENST00000567258 SSFA2P28290 1259 aa13.98□□□□□ -0.17
LINC00564-201ENST00000567258 IL13P35225 146 aa13.98□□□□□ -0.17
LINC00564-201ENST00000567258 AEBP1Q8IUX7 1158 aa13.98□□□□□ -0.17
LINC00564-201ENST00000567258 ATG3Q9NT62 314 aa13.98□□□□□ -0.17
LINC00564-201ENST00000567258 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.97□□□□□ -0.17
LINC00564-201ENST00000567258 GNPATO15228 680 aa13.97□□□□□ -0.17
LINC00564-201ENST00000567258 PER1O15534 1290 aaPredicted RBP13.97□□□□□ -0.17
LINC00564-201ENST00000567258 RNF166Q96A37 237 aaPredicted RBP13.97□□□□□ -0.17
LINC00564-201ENST00000567258 ZNF831Q5JPB2 1677 aa13.97□□□□□ -0.17
LINC00564-201ENST00000567258 LINC00116Q8NCU8 138 aa13.96□□□□□ -0.17
LINC00564-201ENST00000567258 MS4A4AQ96JQ5 239 aa13.96□□□□□ -0.17
LINC00564-201ENST00000567258 ZSWIM6Q9HCJ5 1215 aa13.96□□□□□ -0.17
LINC00564-201ENST00000567258 KDRP35968 1356 aa13.96□□□□□ -0.18
LINC00564-201ENST00000567258 RIOK3O14730 519 aaKnown RBP13.95□□□□□ -0.18
LINC00564-201ENST00000567258 HMOX1P09601 288 aa13.95□□□□□ -0.18
LINC00564-201ENST00000567258 AKAP4Q5JQC9 854 aa13.95□□□□□ -0.18
LINC00564-201ENST00000567258 RTCBQ9Y3I0 505 aaKnown RBP13.95□□□□□ -0.18
LINC00564-201ENST00000567258 NPC1L1Q9UHC9 1359 aa13.95□□□□□ -0.18
LINC00564-201ENST00000567258 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.94□□□□□ -0.18
LINC00564-201ENST00000567258 TRAPPC3LQ5T215 181 aa13.94□□□□□ -0.18
LINC00564-201ENST00000567258 NFATC2IPQ8NCF5 419 aa13.94□□□□□ -0.18
LINC00564-201ENST00000567258 ZFP91Q96JP5 570 aaPredicted RBP13.94□□□□□ -0.18
LINC00564-201ENST00000567258 CFAP53Q96M91 514 aa13.94□□□□□ -0.18
LINC00564-201ENST00000567258 COL5A3P25940 1745 aaPredicted RBP13.93□□□□□ -0.18
LINC00564-201ENST00000567258 KDM6AO15550 1401 aaPredicted RBP13.93□□□□□ -0.18
LINC00564-201ENST00000567258 U2SURPO15042 1029 aaKnown RBP13.93□□□□□ -0.18
LINC00564-201ENST00000567258 PTCD1O75127 700 aaKnown RBP13.93□□□□□ -0.18
LINC00564-201ENST00000567258 ITPK1Q13572 414 aa13.93□□□□□ -0.18
LINC00564-201ENST00000567258 GPR153Q6NV75 609 aa13.93□□□□□ -0.18
LINC00564-201ENST00000567258 RNF25Q96BH1 459 aaPredicted RBP13.93□□□□□ -0.18
LINC00564-201ENST00000567258 CD2APQ9Y5K6 639 aa13.93□□□□□ -0.18
LINC00564-201ENST00000567258 GRIN3BO60391 1043 aa13.92□□□□□ -0.18
LINC00564-201ENST00000567258 ZNF687Q8N1G0 1237 aa13.92□□□□□ -0.18
LINC00564-201ENST00000567258 NLGN2Q8NFZ4 835 aa13.92□□□□□ -0.18
LINC00564-201ENST00000567258 RFC4P35249 363 aa13.91□□□□□ -0.18
LINC00564-201ENST00000567258 RC3H1Q5TC82 1133 aaKnown RBP13.91□□□□□ -0.18
LINC00564-201ENST00000567258 MYH14Q7Z406 1995 aaKnown RBP13.91□□□□□ -0.18
LINC00564-201ENST00000567258 SMIM5Q71RC9 77 aa13.9□□□□□ -0.18
LINC00564-201ENST00000567258 SLC52A2Q9HAB3 445 aa13.9□□□□□ -0.18
LINC00564-201ENST00000567258 NUDCQ9Y266 331 aa13.9□□□□□ -0.18
LINC00564-201ENST00000567258 CNTNAP4Q9C0A0 1308 aa13.9□□□□□ -0.19
LINC00564-201ENST00000567258 RNMTO43148 476 aaKnown RBP13.89□□□□□ -0.19
LINC00564-201ENST00000567258 AMIGO3Q86WK7 504 aa13.89□□□□□ -0.19
LINC00564-201ENST00000567258 NLGN1Q8N2Q7 840 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms