RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 MRGPRX2Q96LB1 330 aa4.2□□□□□ -1.74
CHD9-209ENST00000564255 BRPF3Q9ULD4 1205 aa4.2□□□□□ -1.74
CHD9-209ENST00000564255 LRFN2Q9ULH4 789 aa4.2□□□□□ -1.74
CHD9-209ENST00000564255 LOC105371045A0A1W2PR82 267 aa4.19□□□□□ -1.74
CHD9-209ENST00000564255 EML1O00423 815 aa4.19□□□□□ -1.74
CHD9-209ENST00000564255 EIF1AXP47813 144 aaKnown RBP4.19□□□□□ -1.74
CHD9-209ENST00000564255 MRPL58Q14197 206 aaKnown RBP4.19□□□□□ -1.74
CHD9-209ENST00000564255 Q6ZVU0 165 aa4.19□□□□□ -1.74
CHD9-209ENST00000564255 NBPF15Q8N660 670 aa4.19□□□□□ -1.74
CHD9-209ENST00000564255 ABTB2Q8N961 1025 aa4.19□□□□□ -1.74
CHD9-209ENST00000564255 ZDHHC1Q8WTX9 485 aa4.19□□□□□ -1.74
CHD9-209ENST00000564255 CHMP7Q8WUX9 453 aaPredicted RBP4.19□□□□□ -1.74
CHD9-209ENST00000564255 DMRTB1Q96MA1 342 aa4.19□□□□□ -1.74
CHD9-209ENST00000564255 C8orf37Q96NL8 207 aa4.19□□□□□ -1.74
CHD9-209ENST00000564255 ARHGEF10LQ9HCE6 1279 aa4.19□□□□□ -1.74
CHD9-209ENST00000564255 FAM26DQ5JW98 314 aa4.19□□□□□ -1.74
CHD9-209ENST00000564255 RAB6BQ9NRW1 208 aa4.19□□□□□ -1.74
CHD9-209ENST00000564255 PTGIRP43119 386 aa4.18□□□□□ -1.74
CHD9-209ENST00000564255 TLR1Q15399 786 aa4.18□□□□□ -1.74
CHD9-209ENST00000564255 CCDC87Q9NVE4 849 aa4.18□□□□□ -1.74
CHD9-209ENST00000564255 NOS2P35228 1153 aa4.18□□□□□ -1.74
CHD9-209ENST00000564255 SLC19A1P41440 591 aa4.18□□□□□ -1.74
CHD9-209ENST00000564255 FGD1P98174 961 aa4.18□□□□□ -1.74
CHD9-209ENST00000564255 PLCB3Q01970 1234 aa4.18□□□□□ -1.74
CHD9-209ENST00000564255 CLN3Q13286 438 aa4.18□□□□□ -1.74
CHD9-209ENST00000564255 NNTQ13423 1086 aa4.18□□□□□ -1.74
CHD9-209ENST00000564255 KLF16Q9BXK1 252 aaPredicted RBP4.18□□□□□ -1.74
CHD9-209ENST00000564255 PRKD2Q9BZL6 878 aa4.18□□□□□ -1.74
CHD9-209ENST00000564255 CHMP3Q9Y3E7 222 aa4.18□□□□□ -1.74
CHD9-209ENST00000564255 SERTM1A2A2V5 107 aa4.17□□□□□ -1.74
CHD9-209ENST00000564255 RGS20O76081 388 aa4.17□□□□□ -1.74
CHD9-209ENST00000564255 BRD2P25440 801 aaKnown RBP4.17□□□□□ -1.74
CHD9-209ENST00000564255 CENPCQ03188 943 aa4.17□□□□□ -1.74
CHD9-209ENST00000564255 C11orf91Q3C1V1 193 aa4.17□□□□□ -1.74
CHD9-209ENST00000564255 GJD3Q8N144 294 aa4.17□□□□□ -1.74
CHD9-209ENST00000564255 CNKSR1Q969H4 720 aa4.17□□□□□ -1.74
CHD9-209ENST00000564255 SHROOM4Q9ULL8 1493 aa4.17□□□□□ -1.74
CHD9-209ENST00000564255 RTN1Q16799 776 aa4.17□□□□□ -1.74
CHD9-209ENST00000564255 LDLRAD1Q5T700 205 aa4.17□□□□□ -1.74
CHD9-209ENST00000564255 C1orf53Q5VUE5 145 aa4.17□□□□□ -1.74
CHD9-209ENST00000564255 SPRYD7Q5W111 196 aa4.17□□□□□ -1.74
CHD9-209ENST00000564255 PPARGC1BQ86YN6 1023 aaKnown RBP4.17□□□□□ -1.74
CHD9-209ENST00000564255 PKD2L1Q9P0L9 805 aa4.17□□□□□ -1.74
CHD9-209ENST00000564255 ZBTB39O15060 712 aa4.16□□□□□ -1.74
CHD9-209ENST00000564255 GPR182O15218 404 aa4.16□□□□□ -1.74
CHD9-209ENST00000564255 EHHADHQ08426 723 aa4.16□□□□□ -1.74
CHD9-209ENST00000564255 PRPF40AO75400 957 aaKnown RBP4.16□□□□□ -1.74
CHD9-209ENST00000564255 CBLBQ13191 982 aa4.16□□□□□ -1.74
CHD9-209ENST00000564255 PDE3BQ13370 1112 aa4.16□□□□□ -1.74
CHD9-209ENST00000564255 SH3PXD2AQ5TCZ1 1133 aa4.16□□□□□ -1.74
CHD9-209ENST00000564255 ALDH16A1Q8IZ83 802 aa4.16□□□□□ -1.74
CHD9-209ENST00000564255 SNIP1Q8TAD8 396 aaKnown RBP4.16□□□□□ -1.74
CHD9-209ENST00000564255 BCL11AQ9H165 835 aa4.16□□□□□ -1.74
CHD9-209ENST00000564255 MZF1P28698 734 aaPredicted RBP4.16□□□□□ -1.74
CHD9-209ENST00000564255 ZNF598Q86UK7 904 aaKnown RBP4.16□□□□□ -1.74
CHD9-209ENST00000564255 ETFBKMTQ8IXQ9 262 aa4.16□□□□□ -1.74
CHD9-209ENST00000564255 POLIQ9UNA4 740 aa4.16□□□□□ -1.74
CHD9-209ENST00000564255 PDGFAP04085 211 aa4.15□□□□□ -1.74
CHD9-209ENST00000564255 DAB2P98082 770 aa4.15□□□□□ -1.74
CHD9-209ENST00000564255 ENOX2Q16206 610 aaKnown RBP4.15□□□□□ -1.74
CHD9-209ENST00000564255 TMC4Q7Z404 712 aa4.15□□□□□ -1.74
CHD9-209ENST00000564255 C7orf43Q8WVR3 580 aa4.15□□□□□ -1.74
CHD9-209ENST00000564255 GRIP2Q9C0E4 1043 aa4.15□□□□□ -1.74
CHD9-209ENST00000564255 ALDH1A1P00352 501 aa4.15□□□□□ -1.75
CHD9-209ENST00000564255 LDHBP07195 334 aaKnown RBP4.15□□□□□ -1.75
CHD9-209ENST00000564255 DGKZQ13574 1117 aa4.15□□□□□ -1.75
CHD9-209ENST00000564255 L3MBTL2Q969R5 705 aa4.15□□□□□ -1.75
CHD9-209ENST00000564255 NGLY1Q96IV0 654 aa4.15□□□□□ -1.75
CHD9-209ENST00000564255 PHACTR1Q9C0D0 580 aa4.15□□□□□ -1.75
CHD9-209ENST00000564255 CABP1Q9NZU7 370 aa4.15□□□□□ -1.75
CHD9-209ENST00000564255 HCN4Q9Y3Q4 1203 aa4.15□□□□□ -1.75
CHD9-209ENST00000564255 WASF2Q9Y6W5 498 aa4.15□□□□□ -1.75
CHD9-209ENST00000564255 GPC1P35052 558 aa4.14□□□□□ -1.75
CHD9-209ENST00000564255 ZNF697Q5TEC3 545 aa4.14□□□□□ -1.75
CHD9-209ENST00000564255 ATCAYQ86WG3 371 aa4.14□□□□□ -1.75
CHD9-209ENST00000564255 EDEM1Q92611 657 aa4.14□□□□□ -1.75
CHD9-209ENST00000564255 IFT43Q96FT9 208 aa4.14□□□□□ -1.75
CHD9-209ENST00000564255 NLRP3Q96P20 1036 aa4.14□□□□□ -1.75
CHD9-209ENST00000564255 PARP2Q9UGN5 583 aa4.14□□□□□ -1.75
CHD9-209ENST00000564255 ZIC2O95409 532 aaPredicted RBP4.14□□□□□ -1.75
CHD9-209ENST00000564255 TIMP2P16035 220 aa4.14□□□□□ -1.75
CHD9-209ENST00000564255 USP5P45974 858 aa4.14□□□□□ -1.75
CHD9-209ENST00000564255 RNF144AP50876 292 aaPredicted RBP4.14□□□□□ -1.75
CHD9-209ENST00000564255 RHBDD1Q8TEB9 315 aa4.14□□□□□ -1.75
CHD9-209ENST00000564255 ITPKCQ96DU7 683 aa4.14□□□□□ -1.75
CHD9-209ENST00000564255 AGBL1Q96MI9 1066 aa4.14□□□□□ -1.75
CHD9-209ENST00000564255 ZSCAN10Q96SZ4 725 aaPredicted RBP4.14□□□□□ -1.75
CHD9-209ENST00000564255 BACH2Q9BYV9 841 aa4.14□□□□□ -1.75
CHD9-209ENST00000564255 MEN1O00255 615 aa4.13□□□□□ -1.75
CHD9-209ENST00000564255 SCAMP3O14828 347 aaKnown RBP4.13□□□□□ -1.75
CHD9-209ENST00000564255 ITGAEP38570 1179 aa4.13□□□□□ -1.75
CHD9-209ENST00000564255 HDLBPQ00341 1268 aaKnown RBP4.13□□□□□ -1.75
CHD9-209ENST00000564255 TSNAXIP1Q2TAA8 658 aa4.13□□□□□ -1.75
CHD9-209ENST00000564255 TMC1Q8TDI8 760 aa4.13□□□□□ -1.75
CHD9-209ENST00000564255 DUSP9Q99956 384 aaKnown RBP4.13□□□□□ -1.75
CHD9-209ENST00000564255 CFHR5Q9BXR6 569 aa4.13□□□□□ -1.75
CHD9-209ENST00000564255 NIFKQ9BYG3 293 aaKnown RBP4.13□□□□□ -1.75
CHD9-209ENST00000564255 WWC3Q9ULE0 1092 aa4.13□□□□□ -1.75
CHD9-209ENST00000564255 TXLNAP40222 546 aa4.13□□□□□ -1.75
CHD9-209ENST00000564255 ZAP70P43403 619 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms