RNA–Protein interactions for RNA: ENST00000564177.1

SCAPER-211, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-211ENST00000564177 BABAM1Q9NWV8 329 aa23.96■■□□□ 1.43
SCAPER-211ENST00000564177 SNRPA1P09661 255 aaKnown RBP23.95■■□□□ 1.42
SCAPER-211ENST00000564177 ARHGEF1Q92888 912 aaKnown RBP23.95■■□□□ 1.42
SCAPER-211ENST00000564177 ZBTB1Q9Y2K1 713 aa23.95■■□□□ 1.42
SCAPER-211ENST00000564177 SOS1Q07889 1333 aaPredicted RBP23.94■■□□□ 1.42
SCAPER-211ENST00000564177 TSPYL4Q9UJ04 414 aa23.94■■□□□ 1.42
SCAPER-211ENST00000564177 EIF4A1P60842 406 aaKnown RBP23.93■■□□□ 1.42
SCAPER-211ENST00000564177 PPP1R1BQ9UD71 204 aaPredicted RBP23.93■■□□□ 1.42
SCAPER-211ENST00000564177 PRAMEF22A3QJZ6 481 aa23.92■■□□□ 1.42
SCAPER-211ENST00000564177 POLD1P28340 1107 aa23.92■■□□□ 1.42
SCAPER-211ENST00000564177 MSL1Q68DK7 614 aa23.92■■□□□ 1.42
SCAPER-211ENST00000564177 USP16Q9Y5T5 823 aa23.92■■□□□ 1.42
SCAPER-211ENST00000564177 C4AP0C0L4 1744 aa23.92■■□□□ 1.42
SCAPER-211ENST00000564177 RFC4P35249 363 aa23.91■■□□□ 1.42
SCAPER-211ENST00000564177 FAM9BQ8IZU0 186 aa23.91■■□□□ 1.42
SCAPER-211ENST00000564177 COL15A1P39059 1388 aa23.91■■□□□ 1.42
SCAPER-211ENST00000564177 CHL1O00533 1208 aa23.9■■□□□ 1.42
SCAPER-211ENST00000564177 DIEXFQ68CQ4 756 aaKnown RBP23.9■■□□□ 1.42
SCAPER-211ENST00000564177 ARXQ96QS3 562 aa23.9■■□□□ 1.42
SCAPER-211ENST00000564177 GIGYF1O75420 1035 aaPredicted RBP23.89■■□□□ 1.41
SCAPER-211ENST00000564177 CANXP27824 592 aaKnown RBP23.89■■□□□ 1.41
SCAPER-211ENST00000564177 NCBP3Q53F19 620 aaKnown RBP23.89■■□□□ 1.41
SCAPER-211ENST00000564177 USP42Q9H9J4 1324 aaKnown RBP23.88■■□□□ 1.41
SCAPER-211ENST00000564177 CCER2I3L3R5 266 aa23.88■■□□□ 1.41
SCAPER-211ENST00000564177 A1BGP04217 495 aa23.88■■□□□ 1.41
SCAPER-211ENST00000564177 EIF5P55010 431 aaKnown RBP23.88■■□□□ 1.41
SCAPER-211ENST00000564177 CCDC27Q2M243 656 aa23.88■■□□□ 1.41
SCAPER-211ENST00000564177 GYS1P13807 737 aa23.87■■□□□ 1.41
SCAPER-211ENST00000564177 IL6STP40189 918 aaPredicted RBP23.87■■□□□ 1.41
SCAPER-211ENST00000564177 CALD1Q05682 793 aaKnown RBP23.87■■□□□ 1.41
SCAPER-211ENST00000564177 CFAP44Q96MT7 982 aa23.87■■□□□ 1.41
SCAPER-211ENST00000564177 LAMB4A4D0S4 1761 aa23.87■■□□□ 1.41
SCAPER-211ENST00000564177 LAS1LQ9Y4W2 734 aaKnown RBP23.86■■□□□ 1.41
SCAPER-211ENST00000564177 ZNF853P0CG23 659 aa23.85■■□□□ 1.41
SCAPER-211ENST00000564177 NLGN1Q8N2Q7 840 aa23.85■■□□□ 1.41
SCAPER-211ENST00000564177 SRP68Q9UHB9 627 aaKnown RBP23.85■■□□□ 1.41
SCAPER-211ENST00000564177 SENP3-EIF4A1A0A087X0R7 540 aa23.84■■□□□ 1.41
SCAPER-211ENST00000564177 IFT57Q9NWB7 429 aa23.84■■□□□ 1.41
SCAPER-211ENST00000564177 NARFQ9UHQ1 456 aa23.84■■□□□ 1.41
SCAPER-211ENST00000564177 ZPR1O75312 459 aa23.83■■□□□ 1.41
SCAPER-211ENST00000564177 WWC1Q8IX03 1113 aa23.83■■□□□ 1.41
SCAPER-211ENST00000564177 FHDC1Q9C0D6 1143 aaPredicted RBP23.83■■□□□ 1.41
SCAPER-211ENST00000564177 A0A087WZG4 1122 aa23.82■■□□□ 1.4
SCAPER-211ENST00000564177 GNAI1P63096 354 aa23.82■■□□□ 1.4
SCAPER-211ENST00000564177 USPL1Q5W0Q7 1092 aa23.82■■□□□ 1.4
SCAPER-211ENST00000564177 MBIPQ9NS73 344 aa23.82■■□□□ 1.4
SCAPER-211ENST00000564177 NBPF26B4DH59 902 aa23.81■■□□□ 1.4
SCAPER-211ENST00000564177 MMP10P09238 476 aa23.81■■□□□ 1.4
SCAPER-211ENST00000564177 PIP4K2AP48426 406 aaPredicted RBP23.81■■□□□ 1.4
SCAPER-211ENST00000564177 NBPF10Q6P3W6 841 aaKnown RBP23.81■■□□□ 1.4
SCAPER-211ENST00000564177 NBPF15Q8N660 670 aa23.81■■□□□ 1.4
SCAPER-211ENST00000564177 ZNF330Q9Y3S2 320 aaPredicted RBP23.81■■□□□ 1.4
SCAPER-211ENST00000564177 FKBP8Q14318 412 aa23.8■■□□□ 1.4
SCAPER-211ENST00000564177 NPM2Q86SE8 214 aaKnown RBP23.79■■□□□ 1.4
SCAPER-211ENST00000564177 SYT17Q9BSW7 474 aa23.79■■□□□ 1.4
SCAPER-211ENST00000564177 KRT24Q2M2I5 525 aa23.78■■□□□ 1.4
SCAPER-211ENST00000564177 NGEFQ8N5V2 710 aa23.78■■□□□ 1.4
SCAPER-211ENST00000564177 BCL2L12Q9HB09 334 aa23.78■■□□□ 1.4
SCAPER-211ENST00000564177 SCN7AQ01118 1682 aa23.77■■□□□ 1.4
SCAPER-211ENST00000564177 TBC1D2BQ9UPU7 963 aa23.77■■□□□ 1.4
SCAPER-211ENST00000564177 ERBB4Q15303 1308 aa23.77■■□□□ 1.4
SCAPER-211ENST00000564177 HOXB7P09629 217 aa23.76■■□□□ 1.39
SCAPER-211ENST00000564177 MIER1Q8N108 512 aa23.76■■□□□ 1.39
SCAPER-211ENST00000564177 IL16Q14005 1332 aa23.76■■□□□ 1.39
SCAPER-211ENST00000564177 DZIP3Q86Y13 1208 aaKnown RBP23.75■■□□□ 1.39
SCAPER-211ENST00000564177 SALL2Q9Y467 1007 aaPredicted RBP23.75■■□□□ 1.39
SCAPER-211ENST00000564177 CAMTA2O94983 1202 aa23.74■■□□□ 1.39
SCAPER-211ENST00000564177 TM4SF1P30408 202 aa23.74■■□□□ 1.39
SCAPER-211ENST00000564177 KLHL34Q8N239 644 aa23.74■■□□□ 1.39
SCAPER-211ENST00000564177 EIF2S2P20042 333 aaKnown RBP23.73■■□□□ 1.39
SCAPER-211ENST00000564177 DDR1Q08345 913 aa23.73■■□□□ 1.39
SCAPER-211ENST00000564177 WDR63Q8IWG1 891 aa23.73■■□□□ 1.39
SCAPER-211ENST00000564177 CD2APQ9Y5K6 639 aa23.73■■□□□ 1.39
SCAPER-211ENST00000564177 PARP3Q9Y6F1 533 aa23.73■■□□□ 1.39
SCAPER-211ENST00000564177 BCORQ6W2J9 1755 aa23.73■■□□□ 1.39
SCAPER-211ENST00000564177 GOLGB1Q14789 3259 aaKnown RBP23.72■■□□□ 1.39
SCAPER-211ENST00000564177 NFIXQ14938 502 aa23.72■■□□□ 1.39
SCAPER-211ENST00000564177 PDIA6Q15084 440 aa23.72■■□□□ 1.39
SCAPER-211ENST00000564177 DUSP27Q5VZP5 1158 aa23.72■■□□□ 1.39
SCAPER-211ENST00000564177 POLRMTO00411 1230 aaKnown RBP23.71■■□□□ 1.39
SCAPER-211ENST00000564177 MYL6BP14649 208 aa23.71■■□□□ 1.39
SCAPER-211ENST00000564177 LRP10Q7Z4F1 713 aa23.71■■□□□ 1.39
SCAPER-211ENST00000564177 RGL2O15211 777 aa23.7■■□□□ 1.38
SCAPER-211ENST00000564177 HDGFL1Q5TGJ6 251 aa23.7■■□□□ 1.38
SCAPER-211ENST00000564177 NLGN2Q8NFZ4 835 aa23.7■■□□□ 1.38
SCAPER-211ENST00000564177 TSR2Q969E8 191 aaKnown RBP23.7■■□□□ 1.38
SCAPER-211ENST00000564177 UTRNP46939 3433 aa23.7■■□□□ 1.38
SCAPER-211ENST00000564177 C10orf71Q711Q0 1435 aa23.69■■□□□ 1.38
SCAPER-211ENST00000564177 CLEC4GQ6UXB4 293 aa23.69■■□□□ 1.38
SCAPER-211ENST00000564177 ZNF521Q96K83 1311 aa23.68■■□□□ 1.38
SCAPER-211ENST00000564177 PROSER3Q2NL68 480 aa23.68■■□□□ 1.38
SCAPER-211ENST00000564177 TBC1D9BQ66K14 1250 aa23.68■■□□□ 1.38
SCAPER-211ENST00000564177 C8orf58Q8NAV2 365 aa23.68■■□□□ 1.38
SCAPER-211ENST00000564177 NECTIN2Q92692 538 aa23.68■■□□□ 1.38
SCAPER-211ENST00000564177 ZNF652Q9Y2D9 606 aa23.67■■□□□ 1.38
SCAPER-211ENST00000564177 KIF13BQ9NQT8 1826 aa23.66■■□□□ 1.38
SCAPER-211ENST00000564177 FANCIQ9NVI1 1328 aa23.66■■□□□ 1.38
SCAPER-211ENST00000564177 TTLL7Q6ZT98 887 aa23.66■■□□□ 1.38
SCAPER-211ENST00000564177 DDX21Q9NR30 783 aaKnown RBP eCLIP23.66■■□□□ 1.38
SCAPER-211ENST00000564177 MAP3K15Q6ZN16 1313 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms