RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 VSIG10Q8N0Z9 540 aa28.18■■■□□ 2.1
HERC2-204ENST00000563945 RNF181Q9P0P0 153 aa28.18■■■□□ 2.1
HERC2-204ENST00000563945 U2SURPO15042 1029 aaKnown RBP28.17■■■□□ 2.1
HERC2-204ENST00000563945 STARD3NLO95772 234 aa28.17■■■□□ 2.1
HERC2-204ENST00000563945 KDM2BQ8NHM5 1336 aa28.17■■■□□ 2.1
HERC2-204ENST00000563945 PER1O15534 1290 aaPredicted RBP28.16■■■□□ 2.1
HERC2-204ENST00000563945 ZBTB1Q9Y2K1 713 aa28.16■■■□□ 2.1
HERC2-204ENST00000563945 COL15A1P39059 1388 aa28.15■■■□□ 2.1
HERC2-204ENST00000563945 CANXP27824 592 aaKnown RBP28.15■■■□□ 2.1
HERC2-204ENST00000563945 TEFQ10587 303 aa28.15■■■□□ 2.1
HERC2-204ENST00000563945 NFIXQ14938 502 aa28.15■■■□□ 2.1
HERC2-204ENST00000563945 BRCA1P38398 1863 aaKnown RBP28.15■■■□□ 2.1
HERC2-204ENST00000563945 ARFGEF1Q9Y6D6 1849 aa28.14■■■□□ 2.1
HERC2-204ENST00000563945 A0A087WZG4 1122 aa28.13■■■□□ 2.09
HERC2-204ENST00000563945 SERPINB2P05120 415 aa28.13■■■□□ 2.09
HERC2-204ENST00000563945 MRC1P22897 1456 aa28.13■■■□□ 2.09
HERC2-204ENST00000563945 NPM2Q86SE8 214 aaKnown RBP28.12■■■□□ 2.09
HERC2-204ENST00000563945 GAS2L2Q8NHY3 880 aa28.12■■■□□ 2.09
HERC2-204ENST00000563945 RBM46Q8TBY0 533 aaKnown RBP28.12■■■□□ 2.09
HERC2-204ENST00000563945 TEX13AQ9BXU3 409 aaPredicted RBP28.11■■■□□ 2.09
HERC2-204ENST00000563945 GNAT3A8MTJ3 354 aa28.1■■■□□ 2.09
HERC2-204ENST00000563945 BICDL1Q6ZP65 573 aa28.09■■■□□ 2.09
HERC2-204ENST00000563945 KCPQ6ZWJ8 1503 aa28.08■■■□□ 2.09
HERC2-204ENST00000563945 H0YIN7 160 aa28.08■■■□□ 2.09
HERC2-204ENST00000563945 TTLL6Q8N841 843 aa28.08■■■□□ 2.09
HERC2-204ENST00000563945 RRAGCQ9HB90 399 aa28.08■■■□□ 2.09
HERC2-204ENST00000563945 ZNF330Q9Y3S2 320 aaPredicted RBP28.08■■■□□ 2.09
HERC2-204ENST00000563945 C2CD5Q86YS7 1000 aa28.07■■■□□ 2.08
HERC2-204ENST00000563945 ZNF790Q6PG37 636 aa28.06■■■□□ 2.08
HERC2-204ENST00000563945 BCL2L12Q9HB09 334 aa28.06■■■□□ 2.08
HERC2-204ENST00000563945 ADAMTS7Q9UKP4 1686 aa28.06■■■□□ 2.08
HERC2-204ENST00000563945 EIF5P55010 431 aaKnown RBP28.05■■■□□ 2.08
HERC2-204ENST00000563945 FSTL1Q12841 308 aa28.05■■■□□ 2.08
HERC2-204ENST00000563945 VIRMAQ69YN4 1812 aaKnown RBP28.05■■■□□ 2.08
HERC2-204ENST00000563945 ZNF496Q96IT1 587 aaPredicted RBP28.05■■■□□ 2.08
HERC2-204ENST00000563945 CFAP53Q96M91 514 aa28.05■■■□□ 2.08
HERC2-204ENST00000563945 NPC1L1Q9UHC9 1359 aa28.04■■■□□ 2.08
HERC2-204ENST00000563945 IL17REQ8NFR9 667 aa28.04■■■□□ 2.08
HERC2-204ENST00000563945 LMNB1P20700 586 aa28.03■■■□□ 2.08
HERC2-204ENST00000563945 RASSF7Q02833 373 aa28.03■■■□□ 2.08
HERC2-204ENST00000563945 NPHP1O15259 732 aa28.02■■■□□ 2.08
HERC2-204ENST00000563945 FMNL2Q96PY5 1086 aa28.02■■■□□ 2.08
HERC2-204ENST00000563945 HEG1Q9ULI3 1381 aa28.01■■■□□ 2.07
HERC2-204ENST00000563945 ZC3H4Q9UPT8 1303 aaKnown RBP28.01■■■□□ 2.07
HERC2-204ENST00000563945 PDZRN3Q9UPQ7 1066 aa28.01■■■□□ 2.07
HERC2-204ENST00000563945 AFDNP55196 1824 aaKnown RBP28■■■□□ 2.07
HERC2-204ENST00000563945 ZNF622Q969S3 477 aaKnown RBP eCLIP28■■■□□ 2.07
HERC2-204ENST00000563945 TBC1D2BQ9UPU7 963 aa28■■■□□ 2.07
HERC2-204ENST00000563945 NUDCQ9Y266 331 aa28■■■□□ 2.07
HERC2-204ENST00000563945 PDE6BP35913 854 aa27.99■■■□□ 2.07
HERC2-204ENST00000563945 IL6STP40189 918 aaPredicted RBP27.99■■■□□ 2.07
HERC2-204ENST00000563945 DNAJC5GQ8N7S2 189 aa27.99■■■□□ 2.07
HERC2-204ENST00000563945 TBC1D9BQ66K14 1250 aa27.98■■■□□ 2.07
HERC2-204ENST00000563945 BTBD11A6QL63 1104 aa27.97■■■□□ 2.07
HERC2-204ENST00000563945 SMC1BQ8NDV3 1235 aa27.97■■■□□ 2.07
HERC2-204ENST00000563945 BRIP1Q9BX63 1249 aa27.97■■■□□ 2.07
HERC2-204ENST00000563945 SBF1O95248 1867 aa27.97■■■□□ 2.07
HERC2-204ENST00000563945 UBR2Q8IWV8 1755 aa27.96■■■□□ 2.07
HERC2-204ENST00000563945 PRKAR2BP31323 418 aa27.96■■■□□ 2.07
HERC2-204ENST00000563945 SETDB2Q96T68 719 aa27.96■■■□□ 2.07
HERC2-204ENST00000563945 COL3A1P02461 1466 aaPredicted RBP27.95■■■□□ 2.07
HERC2-204ENST00000563945 NRXN2Q9P2S2 1712 aa27.95■■■□□ 2.07
HERC2-204ENST00000563945 GLTPD2A6NH11 291 aa27.95■■■□□ 2.06
HERC2-204ENST00000563945 VEGFAP15692 232 aaPredicted RBP27.95■■■□□ 2.06
HERC2-204ENST00000563945 RTF1Q92541 710 aaKnown RBP27.95■■■□□ 2.06
HERC2-204ENST00000563945 A1BGP04217 495 aa27.94■■■□□ 2.06
HERC2-204ENST00000563945 ZNF219Q9P2Y4 722 aaPredicted RBP27.94■■■□□ 2.06
HERC2-204ENST00000563945 CARMIL3Q8ND23 1372 aa27.94■■■□□ 2.06
HERC2-204ENST00000563945 DPY19L2Q6NUT2 758 aa27.93■■■□□ 2.06
HERC2-204ENST00000563945 PHACTR3Q96KR7 559 aa27.93■■■□□ 2.06
HERC2-204ENST00000563945 PRR5LQ6MZQ0 368 aa27.92■■■□□ 2.06
HERC2-204ENST00000563945 CCDC24Q8N4L8 307 aa27.92■■■□□ 2.06
HERC2-204ENST00000563945 TNRC6CQ9HCJ0 1690 aaKnown RBP27.91■■■□□ 2.06
HERC2-204ENST00000563945 U2AF1L5P0DN76 240 aaPredicted RBP27.91■■■□□ 2.06
HERC2-204ENST00000563945 ST5P78524 1137 aa27.91■■■□□ 2.06
HERC2-204ENST00000563945 HTRA3P83110 453 aa27.91■■■□□ 2.06
HERC2-204ENST00000563945 U2AF1Q01081 240 aaKnown RBP eCLIP27.91■■■□□ 2.06
HERC2-204ENST00000563945 CNBD1Q8NA66 436 aa27.91■■■□□ 2.06
HERC2-204ENST00000563945 KLRG1Q96E93 195 aa27.91■■■□□ 2.06
HERC2-204ENST00000563945 C21orf2O43822 256 aa27.9■■■□□ 2.06
HERC2-204ENST00000563945 DZIP3Q86Y13 1208 aaKnown RBP27.9■■■□□ 2.06
HERC2-204ENST00000563945 RSPH6AQ9H0K4 717 aa27.9■■■□□ 2.06
HERC2-204ENST00000563945 CEMIPQ8WUJ3 1361 aa27.89■■■□□ 2.06
HERC2-204ENST00000563945 NFKBIEO00221 500 aa27.89■■■□□ 2.06
HERC2-204ENST00000563945 KCNQ3O43525 872 aa27.88■■■□□ 2.05
HERC2-204ENST00000563945 CAMTA2O94983 1202 aa27.88■■■□□ 2.05
HERC2-204ENST00000563945 CNKSR1Q969H4 720 aa27.88■■■□□ 2.05
HERC2-204ENST00000563945 WDR90Q96KV7 1748 aa27.88■■■□□ 2.05
HERC2-204ENST00000563945 DLEC1Q9Y238 1755 aa27.88■■■□□ 2.05
HERC2-204ENST00000563945 PRELPP51888 382 aa27.87■■■□□ 2.05
HERC2-204ENST00000563945 SNRPA1P09661 255 aaKnown RBP27.86■■■□□ 2.05
HERC2-204ENST00000563945 ERFEQ4G0M1 354 aa27.86■■■□□ 2.05
HERC2-204ENST00000563945 ZNF652Q9Y2D9 606 aa27.86■■■□□ 2.05
HERC2-204ENST00000563945 USP16Q9Y5T5 823 aa27.86■■■□□ 2.05
HERC2-204ENST00000563945 STYK1Q6J9G0 422 aa27.84■■■□□ 2.05
HERC2-204ENST00000563945 MCM10Q7L590 875 aa27.84■■■□□ 2.05
HERC2-204ENST00000563945 SIPA1L3O60292 1781 aaPredicted RBP27.83■■■□□ 2.05
HERC2-204ENST00000563945 NEFMP07197 916 aa27.83■■■□□ 2.05
HERC2-204ENST00000563945 SOGA3Q5TF21 947 aa27.83■■■□□ 2.05
HERC2-204ENST00000563945 CLEC4GQ6UXB4 293 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms