RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 TEX13AQ9BXU3 409 aaPredicted RBP20.59■□□□□ 0.89
AC009088.3-201ENST00000563605 RRP7AQ9Y3A4 280 aaKnown RBP20.59■□□□□ 0.89
AC009088.3-201ENST00000563605 ZNF330Q9Y3S2 320 aaPredicted RBP20.59■□□□□ 0.89
AC009088.3-201ENST00000563605 ZPR1O75312 459 aa20.58■□□□□ 0.89
AC009088.3-201ENST00000563605 NEUROD2Q15784 382 aa20.58■□□□□ 0.89
AC009088.3-201ENST00000563605 ADAMTS8Q9UP79 889 aa20.58■□□□□ 0.89
AC009088.3-201ENST00000563605 CD2APQ9Y5K6 639 aa20.58■□□□□ 0.89
AC009088.3-201ENST00000563605 COL24A1Q17RW2 1714 aa20.58■□□□□ 0.88
AC009088.3-201ENST00000563605 SOS1Q07889 1333 aaPredicted RBP20.57■□□□□ 0.88
AC009088.3-201ENST00000563605 PRAMEF22A3QJZ6 481 aa20.57■□□□□ 0.88
AC009088.3-201ENST00000563605 A1BGP04217 495 aa20.57■□□□□ 0.88
AC009088.3-201ENST00000563605 FKBP8Q14318 412 aa20.57■□□□□ 0.88
AC009088.3-201ENST00000563605 USPL1Q5W0Q7 1092 aa20.57■□□□□ 0.88
AC009088.3-201ENST00000563605 USP42Q9H9J4 1324 aaKnown RBP20.56■□□□□ 0.88
AC009088.3-201ENST00000563605 WWC3Q9ULE0 1092 aa20.56■□□□□ 0.88
AC009088.3-201ENST00000563605 USP16Q9Y5T5 823 aa20.56■□□□□ 0.88
AC009088.3-201ENST00000563605 PARP3Q9Y6F1 533 aa20.56■□□□□ 0.88
AC009088.3-201ENST00000563605 TMPOP42166 694 aaKnown RBP20.55■□□□□ 0.88
AC009088.3-201ENST00000563605 SNRPA1P09661 255 aaKnown RBP20.54■□□□□ 0.88
AC009088.3-201ENST00000563605 PIP4K2AP48426 406 aaPredicted RBP20.54■□□□□ 0.88
AC009088.3-201ENST00000563605 RUNDC1Q96C34 613 aa20.54■□□□□ 0.88
AC009088.3-201ENST00000563605 NPM2Q86SE8 214 aaKnown RBP20.53■□□□□ 0.88
AC009088.3-201ENST00000563605 PNISRQ8TF01 805 aaKnown RBP20.53■□□□□ 0.88
AC009088.3-201ENST00000563605 NARFQ9UHQ1 456 aa20.53■□□□□ 0.88
AC009088.3-201ENST00000563605 COL15A1P39059 1388 aa20.53■□□□□ 0.88
AC009088.3-201ENST00000563605 SIPA1L3O60292 1781 aaPredicted RBP20.53■□□□□ 0.88
AC009088.3-201ENST00000563605 YY1P25490 414 aa20.52■□□□□ 0.88
AC009088.3-201ENST00000563605 EIF5P55010 431 aaKnown RBP20.52■□□□□ 0.88
AC009088.3-201ENST00000563605 TBC1D2BQ9UPU7 963 aa20.52■□□□□ 0.88
AC009088.3-201ENST00000563605 UBR2Q8IWV8 1755 aa20.51■□□□□ 0.87
AC009088.3-201ENST00000563605 A0A087WZG4 1122 aa20.51■□□□□ 0.87
AC009088.3-201ENST00000563605 CCDC184Q52MB2 194 aa20.51■□□□□ 0.87
AC009088.3-201ENST00000563605 CICQ96RK0 1608 aaPredicted RBP20.5■□□□□ 0.87
AC009088.3-201ENST00000563605 DDR1Q08345 913 aa20.5■□□□□ 0.87
AC009088.3-201ENST00000563605 BICDL1Q6ZP65 573 aa20.5■□□□□ 0.87
AC009088.3-201ENST00000563605 ANP32CO43423 234 aa20.49■□□□□ 0.87
AC009088.3-201ENST00000563605 YBX3P16989 372 aaKnown RBP eCLIP20.49■□□□□ 0.87
AC009088.3-201ENST00000563605 TM4SF1P30408 202 aa20.49■□□□□ 0.87
AC009088.3-201ENST00000563605 IL6STP40189 918 aaPredicted RBP20.49■□□□□ 0.87
AC009088.3-201ENST00000563605 LMOD3Q0VAK6 560 aa20.49■□□□□ 0.87
AC009088.3-201ENST00000563605 BCL2L12Q9HB09 334 aa20.49■□□□□ 0.87
AC009088.3-201ENST00000563605 A0A0G2JLW4 131 aa20.48■□□□□ 0.87
AC009088.3-201ENST00000563605 TSPYL4Q9UJ04 414 aa20.48■□□□□ 0.87
AC009088.3-201ENST00000563605 LAS1LQ9Y4W2 734 aaKnown RBP20.48■□□□□ 0.87
AC009088.3-201ENST00000563605 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
AC009088.3-201ENST00000563605 DLG5Q8TDM6 1919 aa20.47■□□□□ 0.87
AC009088.3-201ENST00000563605 EIF4A1P60842 406 aaKnown RBP20.47■□□□□ 0.87
AC009088.3-201ENST00000563605 NFIXQ14938 502 aa20.47■□□□□ 0.87
AC009088.3-201ENST00000563605 POLRMTO00411 1230 aaKnown RBP20.46■□□□□ 0.87
AC009088.3-201ENST00000563605 SENP3-EIF4A1A0A087X0R7 540 aa20.45■□□□□ 0.86
AC009088.3-201ENST00000563605 DZIP3Q86Y13 1208 aaKnown RBP20.45■□□□□ 0.86
AC009088.3-201ENST00000563605 NGEFQ8N5V2 710 aa20.45■□□□□ 0.86
AC009088.3-201ENST00000563605 TRIM35Q9UPQ4 493 aa20.45■□□□□ 0.86
AC009088.3-201ENST00000563605 NBPF26B4DH59 902 aa20.44■□□□□ 0.86
AC009088.3-201ENST00000563605 APAF1O14727 1248 aa20.44■□□□□ 0.86
AC009088.3-201ENST00000563605 GRIN3BO60391 1043 aa20.44■□□□□ 0.86
AC009088.3-201ENST00000563605 GIGYF1O75420 1035 aaPredicted RBP20.44■□□□□ 0.86
AC009088.3-201ENST00000563605 DPEP1P16444 411 aa20.44■□□□□ 0.86
AC009088.3-201ENST00000563605 TGFB2P61812 414 aa20.44■□□□□ 0.86
AC009088.3-201ENST00000563605 NBPF10Q6P3W6 841 aaKnown RBP20.44■□□□□ 0.86
AC009088.3-201ENST00000563605 NBPF15Q8N660 670 aa20.44■□□□□ 0.86
AC009088.3-201ENST00000563605 SERPINB2P05120 415 aa20.43■□□□□ 0.86
AC009088.3-201ENST00000563605 TBC1D9BQ66K14 1250 aa20.43■□□□□ 0.86
AC009088.3-201ENST00000563605 MRS2Q9HD23 443 aa20.42■□□□□ 0.86
AC009088.3-201ENST00000563605 CAMTA2O94983 1202 aa20.41■□□□□ 0.86
AC009088.3-201ENST00000563605 MYL6BP14649 208 aa20.4■□□□□ 0.86
AC009088.3-201ENST00000563605 EIF2S2P20042 333 aaKnown RBP20.4■□□□□ 0.86
AC009088.3-201ENST00000563605 C10orf71Q711Q0 1435 aa20.4■□□□□ 0.86
AC009088.3-201ENST00000563605 BCS1LQ9Y276 419 aa20.4■□□□□ 0.86
AC009088.3-201ENST00000563605 CHRNA5P30532 468 aa20.39■□□□□ 0.85
AC009088.3-201ENST00000563605 CCDC24Q8N4L8 307 aa20.39■□□□□ 0.85
AC009088.3-201ENST00000563605 PXDNLA1KZ92 1463 aa20.38■□□□□ 0.85
AC009088.3-201ENST00000563605 NECTIN2Q92692 538 aa20.38■□□□□ 0.85
AC009088.3-201ENST00000563605 SETDB2Q96T68 719 aa20.38■□□□□ 0.85
AC009088.3-201ENST00000563605 BABAM1Q9NWV8 329 aa20.38■□□□□ 0.85
AC009088.3-201ENST00000563605 CHL1O00533 1208 aa20.37■□□□□ 0.85
AC009088.3-201ENST00000563605 NPHP1O15259 732 aa20.37■□□□□ 0.85
AC009088.3-201ENST00000563605 KRT24Q2M2I5 525 aa20.37■□□□□ 0.85
AC009088.3-201ENST00000563605 KCNA3P22001 575 aa20.36■□□□□ 0.85
AC009088.3-201ENST00000563605 PIM2Q9P1W9 311 aa20.36■□□□□ 0.85
AC009088.3-201ENST00000563605 KDM3BQ7LBC6 1761 aa20.36■□□□□ 0.85
AC009088.3-201ENST00000563605 ZNF652Q9Y2D9 606 aa20.35■□□□□ 0.85
AC009088.3-201ENST00000563605 FAM177BA6PVY3 158 aa20.34■□□□□ 0.85
AC009088.3-201ENST00000563605 HLFQ16534 295 aa20.34■□□□□ 0.85
AC009088.3-201ENST00000563605 TTLL7Q6ZT98 887 aa20.34■□□□□ 0.85
AC009088.3-201ENST00000563605 N4BP2Q86UW6 1770 aaPredicted RBP20.34■□□□□ 0.85
AC009088.3-201ENST00000563605 UTRNP46939 3433 aa20.33■□□□□ 0.85
AC009088.3-201ENST00000563605 ANXA1P04083 346 aa20.33■□□□□ 0.85
AC009088.3-201ENST00000563605 PRR5LQ6MZQ0 368 aa20.33■□□□□ 0.85
AC009088.3-201ENST00000563605 ARHGAP27Q6ZUM4 889 aa20.33■□□□□ 0.85
AC009088.3-201ENST00000563605 DALRD3Q5D0E6 543 aaKnown RBP20.32■□□□□ 0.84
AC009088.3-201ENST00000563605 CLEC4GQ6UXB4 293 aa20.32■□□□□ 0.84
AC009088.3-201ENST00000563605 KIF6Q6ZMV9 814 aa20.32■□□□□ 0.84
AC009088.3-201ENST00000563605 C2CD5Q86YS7 1000 aa20.32■□□□□ 0.84
AC009088.3-201ENST00000563605 CFAP44Q96MT7 982 aa20.32■□□□□ 0.84
AC009088.3-201ENST00000563605 NIP7Q9Y221 180 aaKnown RBP eCLIP20.32■□□□□ 0.84
AC009088.3-201ENST00000563605 CARMIL3Q8ND23 1372 aa20.32■□□□□ 0.84
AC009088.3-201ENST00000563605 NBPF5PQ86XG9 351 aaPredicted RBP20.31■□□□□ 0.84
AC009088.3-201ENST00000563605 CNBD1Q8NA66 436 aa20.31■□□□□ 0.84
AC009088.3-201ENST00000563605 ZNF784Q8NCA9 323 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms