RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 ONECUT3O60422 494 aaPredicted RBP17.8■□□□□ 0.44
SPG7-206ENST00000562775 PRIM1P49642 420 aaKnown RBP17.8■□□□□ 0.44
SPG7-206ENST00000562775 MYT1Q01538 1121 aa17.8■□□□□ 0.44
SPG7-206ENST00000562775 PHAXQ9H814 394 aaKnown RBP17.8■□□□□ 0.44
SPG7-206ENST00000562775 ATG3Q9NT62 314 aa17.8■□□□□ 0.44
SPG7-206ENST00000562775 HYPKQ9NX55 129 aa17.8■□□□□ 0.44
SPG7-206ENST00000562775 USP16Q9Y5T5 823 aa17.8■□□□□ 0.44
SPG7-206ENST00000562775 LAMB4A4D0S4 1761 aa17.79■□□□□ 0.44
SPG7-206ENST00000562775 SYTL4Q96C24 671 aaPredicted RBP17.79■□□□□ 0.44
SPG7-206ENST00000562775 ASAP1Q9ULH1 1129 aa17.79■□□□□ 0.44
SPG7-206ENST00000562775 ZBTB7BO15156 539 aaPredicted RBP17.79■□□□□ 0.44
SPG7-206ENST00000562775 PTCD1O75127 700 aaKnown RBP17.79■□□□□ 0.44
SPG7-206ENST00000562775 QTRT2Q9H974 415 aaKnown RBP17.79■□□□□ 0.44
SPG7-206ENST00000562775 ZBTB40Q9NUA8 1239 aa17.79■□□□□ 0.44
SPG7-206ENST00000562775 KAT6BQ8WYB5 2073 aa17.78■□□□□ 0.44
SPG7-206ENST00000562775 ANXA1P04083 346 aa17.78■□□□□ 0.44
SPG7-206ENST00000562775 CCT4P50991 539 aaKnown RBP17.78■□□□□ 0.44
SPG7-206ENST00000562775 PDIA6Q15084 440 aa17.78■□□□□ 0.44
SPG7-206ENST00000562775 VSIG10Q8N0Z9 540 aa17.78■□□□□ 0.44
SPG7-206ENST00000562775 ERBB4Q15303 1308 aa17.78■□□□□ 0.44
SPG7-206ENST00000562775 F6X3S4 739 aa17.77■□□□□ 0.44
SPG7-206ENST00000562775 PROSER3Q2NL68 480 aa17.77■□□□□ 0.44
SPG7-206ENST00000562775 SLC4A10Q6U841 1118 aa17.76■□□□□ 0.43
SPG7-206ENST00000562775 ACSBG1Q96GR2 724 aa17.76■□□□□ 0.43
SPG7-206ENST00000562775 TEX13AQ9BXU3 409 aaPredicted RBP17.76■□□□□ 0.43
SPG7-206ENST00000562775 PXDNLA1KZ92 1463 aa17.76■□□□□ 0.43
SPG7-206ENST00000562775 PELP1Q8IZL8 1130 aaKnown RBP17.75■□□□□ 0.43
SPG7-206ENST00000562775 FBXO41Q8TF61 875 aa17.75■□□□□ 0.43
SPG7-206ENST00000562775 PCDHB15Q9Y5E8 787 aa17.75■□□□□ 0.43
SPG7-206ENST00000562775 KDM2BQ8NHM5 1336 aa17.75■□□□□ 0.43
SPG7-206ENST00000562775 CENPQQ7L2Z9 268 aaPredicted RBP17.74■□□□□ 0.43
SPG7-206ENST00000562775 RBM42Q9BTD8 480 aaKnown RBP17.74■□□□□ 0.43
SPG7-206ENST00000562775 N4BP2Q86UW6 1770 aaPredicted RBP17.73■□□□□ 0.43
SPG7-206ENST00000562775 PI4KAP2A4QPH2 592 aa17.73■□□□□ 0.43
SPG7-206ENST00000562775 DDX58O95786 925 aaKnown RBP17.73■□□□□ 0.43
SPG7-206ENST00000562775 ZNF772Q68DY9 489 aaPredicted RBP17.73■□□□□ 0.43
SPG7-206ENST00000562775 KSR2Q6VAB6 950 aa17.73■□□□□ 0.43
SPG7-206ENST00000562775 SEPT12Q8IYM1 358 aa17.73■□□□□ 0.43
SPG7-206ENST00000562775 PI4KAP1Q8N8J0 262 aa17.73■□□□□ 0.43
SPG7-206ENST00000562775 DNAAF4Q8WXU2 420 aa17.73■□□□□ 0.43
SPG7-206ENST00000562775 MYL6BP14649 208 aa17.72■□□□□ 0.43
SPG7-206ENST00000562775 LRP10Q7Z4F1 713 aa17.72■□□□□ 0.43
SPG7-206ENST00000562775 ADCY9O60503 1353 aa17.72■□□□□ 0.43
SPG7-206ENST00000562775 IGHDP01880 384 aa17.71■□□□□ 0.43
SPG7-206ENST00000562775 DNAJC10Q8IXB1 793 aa17.71■□□□□ 0.43
SPG7-206ENST00000562775 RWDD1Q9H446 243 aaPredicted RBP17.71■□□□□ 0.43
SPG7-206ENST00000562775 KCNQ2O43526 872 aa17.7■□□□□ 0.42
SPG7-206ENST00000562775 COPS6Q7L5N1 327 aa17.7■□□□□ 0.42
SPG7-206ENST00000562775 XAGE3Q8WTP9 111 aa17.7■□□□□ 0.42
SPG7-206ENST00000562775 SMARCC1Q92922 1105 aaPredicted RBP17.7■□□□□ 0.42
SPG7-206ENST00000562775 NBPF26B4DH59 902 aa17.7■□□□□ 0.42
SPG7-206ENST00000562775 STARD3NLO95772 234 aa17.7■□□□□ 0.42
SPG7-206ENST00000562775 A1BGP04217 495 aa17.7■□□□□ 0.42
SPG7-206ENST00000562775 AIMP1Q12904 312 aaKnown RBP17.7■□□□□ 0.42
SPG7-206ENST00000562775 NBPF14Q5TI25 921 aa17.7■□□□□ 0.42
SPG7-206ENST00000562775 NBPF10Q6P3W6 841 aaKnown RBP17.7■□□□□ 0.42
SPG7-206ENST00000562775 NBPF15Q8N660 670 aa17.7■□□□□ 0.42
SPG7-206ENST00000562775 SLC4A9Q96Q91 983 aa17.7■□□□□ 0.42
SPG7-206ENST00000562775 MAP3K2Q9Y2U5 619 aa17.7■□□□□ 0.42
SPG7-206ENST00000562775 ATP10DQ9P241 1426 aa17.69■□□□□ 0.42
SPG7-206ENST00000562775 HDAC1Q13547 482 aaPredicted RBP17.69■□□□□ 0.42
SPG7-206ENST00000562775 BEND3Q5T5X7 828 aa17.69■□□□□ 0.42
SPG7-206ENST00000562775 SRCIN1Q9C0H9 1055 aa17.69■□□□□ 0.42
SPG7-206ENST00000562775 PIP4K2AP48426 406 aaPredicted RBP17.68■□□□□ 0.42
SPG7-206ENST00000562775 MEIS3Q99687 375 aa17.68■□□□□ 0.42
SPG7-206ENST00000562775 GNAI3P08754 354 aa17.67■□□□□ 0.42
SPG7-206ENST00000562775 RBM6P78332 1123 aaKnown RBP17.67■□□□□ 0.42
SPG7-206ENST00000562775 ANKRD13DQ6ZTN6 518 aa17.67■□□□□ 0.42
SPG7-206ENST00000562775 RIC3Q7Z5B4 369 aa17.67■□□□□ 0.42
SPG7-206ENST00000562775 PALLDQ8WX93 1383 aa17.67■□□□□ 0.42
SPG7-206ENST00000562775 NHSQ6T4R5 1651 aa17.67■□□□□ 0.42
SPG7-206ENST00000562775 ALDH1L1O75891 902 aa17.66■□□□□ 0.42
SPG7-206ENST00000562775 CYP19A1P11511 503 aaPredicted RBP17.66■□□□□ 0.42
SPG7-206ENST00000562775 C1orf115Q9H7X2 142 aa17.66■□□□□ 0.42
SPG7-206ENST00000562775 TJP1Q07157 1748 aa17.66■□□□□ 0.42
SPG7-206ENST00000562775 LOC102724428A0A0B4J2F2 783 aa17.66■□□□□ 0.42
SPG7-206ENST00000562775 SIK1P57059 783 aa17.66■□□□□ 0.42
SPG7-206ENST00000562775 LINS1Q8NG48 757 aa17.66■□□□□ 0.42
SPG7-206ENST00000562775 CICQ96RK0 1608 aaPredicted RBP17.65■□□□□ 0.42
SPG7-206ENST00000562775 FAM182BQ5T319 152 aa17.65■□□□□ 0.42
SPG7-206ENST00000562775 PLBD2Q8NHP8 589 aa17.65■□□□□ 0.42
SPG7-206ENST00000562775 USP44Q9H0E7 712 aa17.65■□□□□ 0.42
SPG7-206ENST00000562775 ATP6V1AP38606 617 aa17.64■□□□□ 0.41
SPG7-206ENST00000562775 RPAP2Q8IXW5 612 aaPredicted RBP17.64■□□□□ 0.41
SPG7-206ENST00000562775 METTL22Q9BUU2 404 aaPredicted RBP17.64■□□□□ 0.41
SPG7-206ENST00000562775 IBTKQ9P2D0 1353 aaPredicted RBP17.63■□□□□ 0.41
SPG7-206ENST00000562775 GNAI2P04899 355 aa17.63■□□□□ 0.41
SPG7-206ENST00000562775 NEXNQ0ZGT2 675 aa17.63■□□□□ 0.41
SPG7-206ENST00000562775 KRT27Q7Z3Y8 459 aa17.63■□□□□ 0.41
SPG7-206ENST00000562775 ZNF831Q5JPB2 1677 aa17.63■□□□□ 0.41
SPG7-206ENST00000562775 SBF2Q86WG5 1849 aa17.63■□□□□ 0.41
SPG7-206ENST00000562775 ANKRD44Q8N8A2 993 aa17.62■□□□□ 0.41
SPG7-206ENST00000562775 BTAF1O14981 1849 aa17.62■□□□□ 0.41
SPG7-206ENST00000562775 BRWD3Q6RI45 1802 aa17.62■□□□□ 0.41
SPG7-206ENST00000562775 UBTFL1P0CB47 393 aaPredicted RBP17.62■□□□□ 0.41
SPG7-206ENST00000562775 TTLL7Q6ZT98 887 aa17.62■□□□□ 0.41
SPG7-206ENST00000562775 PTF1AQ7RTS3 328 aa17.62■□□□□ 0.41
SPG7-206ENST00000562775 SIRT2Q8IXJ6 389 aa17.62■□□□□ 0.41
SPG7-206ENST00000562775 ARFGEF2Q9Y6D5 1785 aa17.61■□□□□ 0.41
SPG7-206ENST00000562775 CWF19L2Q2TBE0 894 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms