RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 SLC52A2Q9HAB3 445 aa22.01■■□□□ 1.11
CDT1-202ENST00000562747 KCNA3P22001 575 aa22■■□□□ 1.11
CDT1-202ENST00000562747 PARP3Q9Y6F1 533 aa22■■□□□ 1.11
CDT1-202ENST00000562747 NEFMP07197 916 aa21.99■■□□□ 1.11
CDT1-202ENST00000562747 DDR1Q08345 913 aa21.98■■□□□ 1.11
CDT1-202ENST00000562747 FKBP8Q14318 412 aa21.98■■□□□ 1.11
CDT1-202ENST00000562747 ARHGAP27Q6ZUM4 889 aa21.98■■□□□ 1.11
CDT1-202ENST00000562747 USP42Q9H9J4 1324 aaKnown RBP21.98■■□□□ 1.11
CDT1-202ENST00000562747 PLEKHF1Q96S99 279 aa21.97■■□□□ 1.11
CDT1-202ENST00000562747 IL17REQ8NFR9 667 aa21.96■■□□□ 1.11
CDT1-202ENST00000562747 NMRK2Q9NPI5 230 aa21.96■■□□□ 1.11
CDT1-202ENST00000562747 INTS5Q6P9B9 1019 aaKnown RBP21.95■■□□□ 1.1
CDT1-202ENST00000562747 CEMIPQ8WUJ3 1361 aa21.95■■□□□ 1.1
CDT1-202ENST00000562747 HTATSF1O43719 755 aaKnown RBP21.94■■□□□ 1.1
CDT1-202ENST00000562747 KCPQ6ZWJ8 1503 aa21.94■■□□□ 1.1
CDT1-202ENST00000562747 AFDNP55196 1824 aaKnown RBP21.94■■□□□ 1.1
CDT1-202ENST00000562747 TEFQ10587 303 aa21.93■■□□□ 1.1
CDT1-202ENST00000562747 RTF1Q92541 710 aaKnown RBP21.93■■□□□ 1.1
CDT1-202ENST00000562747 WDR90Q96KV7 1748 aa21.92■■□□□ 1.1
CDT1-202ENST00000562747 MAPK8IP3Q9UPT6 1336 aa21.92■■□□□ 1.1
CDT1-202ENST00000562747 C9orf131Q5VYM1 1079 aa21.92■■□□□ 1.1
CDT1-202ENST00000562747 DNAJC10Q8IXB1 793 aa21.92■■□□□ 1.1
CDT1-202ENST00000562747 SBF1O95248 1867 aa21.92■■□□□ 1.1
CDT1-202ENST00000562747 SIPA1L3O60292 1781 aaPredicted RBP21.92■■□□□ 1.1
CDT1-202ENST00000562747 NRXN2Q9P2S2 1712 aa21.92■■□□□ 1.1
CDT1-202ENST00000562747 POLRMTO00411 1230 aaKnown RBP21.91■■□□□ 1.1
CDT1-202ENST00000562747 ANP32CO43423 234 aa21.91■■□□□ 1.1
CDT1-202ENST00000562747 TOMM70O94826 608 aa21.91■■□□□ 1.1
CDT1-202ENST00000562747 CHRNA5P30532 468 aa21.91■■□□□ 1.1
CDT1-202ENST00000562747 WDR43Q15061 677 aaKnown RBP eCLIP21.91■■□□□ 1.1
CDT1-202ENST00000562747 PIM2Q9P1W9 311 aa21.91■■□□□ 1.1
CDT1-202ENST00000562747 UBR2Q8IWV8 1755 aa21.91■■□□□ 1.1
CDT1-202ENST00000562747 DLEC1Q9Y238 1755 aa21.9■■□□□ 1.1
CDT1-202ENST00000562747 SOS1Q07889 1333 aaPredicted RBP21.89■■□□□ 1.1
CDT1-202ENST00000562747 NFE2L2Q16236 605 aa21.89■■□□□ 1.09
CDT1-202ENST00000562747 DLG5Q8TDM6 1919 aa21.88■■□□□ 1.09
CDT1-202ENST00000562747 TM4SF1P30408 202 aa21.88■■□□□ 1.09
CDT1-202ENST00000562747 APLP1P51693 650 aa21.88■■□□□ 1.09
CDT1-202ENST00000562747 SLC39A6Q13433 755 aa21.88■■□□□ 1.09
CDT1-202ENST00000562747 DALRD3Q5D0E6 543 aaKnown RBP21.88■■□□□ 1.09
CDT1-202ENST00000562747 USPL1Q5W0Q7 1092 aa21.88■■□□□ 1.09
CDT1-202ENST00000562747 TNRC6CQ9HCJ0 1690 aaKnown RBP21.88■■□□□ 1.09
CDT1-202ENST00000562747 MCM10Q7L590 875 aa21.87■■□□□ 1.09
CDT1-202ENST00000562747 CYP19A1P11511 503 aaPredicted RBP21.86■■□□□ 1.09
CDT1-202ENST00000562747 TTC5Q8N0Z6 440 aa21.86■■□□□ 1.09
CDT1-202ENST00000562747 DNAJC5GQ8N7S2 189 aa21.86■■□□□ 1.09
CDT1-202ENST00000562747 COL15A1P39059 1388 aa21.86■■□□□ 1.09
CDT1-202ENST00000562747 ZNF790Q6PG37 636 aa21.85■■□□□ 1.09
CDT1-202ENST00000562747 VSIG10Q8N0Z9 540 aa21.85■■□□□ 1.09
CDT1-202ENST00000562747 RNF181Q9P0P0 153 aa21.85■■□□□ 1.09
CDT1-202ENST00000562747 ADAMTS8Q9UP79 889 aa21.85■■□□□ 1.09
CDT1-202ENST00000562747 ZBTB1Q9Y2K1 713 aa21.85■■□□□ 1.09
CDT1-202ENST00000562747 DCTN1Q14203 1278 aa21.84■■□□□ 1.09
CDT1-202ENST00000562747 RUNDC1Q96C34 613 aa21.84■■□□□ 1.09
CDT1-202ENST00000562747 BCL2L12Q9HB09 334 aa21.84■■□□□ 1.09
CDT1-202ENST00000562747 BTBD11A6QL63 1104 aa21.83■■□□□ 1.09
CDT1-202ENST00000562747 ZPR1O75312 459 aa21.83■■□□□ 1.09
CDT1-202ENST00000562747 NFIXQ14938 502 aa21.83■■□□□ 1.09
CDT1-202ENST00000562747 TIAM2Q8IVF5 1701 aa21.83■■□□□ 1.08
CDT1-202ENST00000562747 RASSF7Q02833 373 aa21.82■■□□□ 1.08
CDT1-202ENST00000562747 RBM46Q8TBY0 533 aaKnown RBP21.82■■□□□ 1.08
CDT1-202ENST00000562747 CARMIL3Q8ND23 1372 aa21.82■■□□□ 1.08
CDT1-202ENST00000562747 TMPOP42166 694 aaKnown RBP21.81■■□□□ 1.08
CDT1-202ENST00000562747 HTRA3P83110 453 aa21.81■■□□□ 1.08
CDT1-202ENST00000562747 CCDC146Q8IYE0 955 aa21.81■■□□□ 1.08
CDT1-202ENST00000562747 NARFQ9UHQ1 456 aa21.81■■□□□ 1.08
CDT1-202ENST00000562747 SCN7AQ01118 1682 aa21.81■■□□□ 1.08
CDT1-202ENST00000562747 ANKRD31Q8N7Z5 1873 aa21.8■■□□□ 1.08
CDT1-202ENST00000562747 PRELPP51888 382 aa21.8■■□□□ 1.08
CDT1-202ENST00000562747 RIPK4P57078 832 aa21.8■■□□□ 1.08
CDT1-202ENST00000562747 LMOD3Q0VAK6 560 aa21.8■■□□□ 1.08
CDT1-202ENST00000562747 TAF7Q15545 349 aaPredicted RBP21.8■■□□□ 1.08
CDT1-202ENST00000562747 HEG1Q9ULI3 1381 aa21.79■■□□□ 1.08
CDT1-202ENST00000562747 CCDC184Q52MB2 194 aa21.79■■□□□ 1.08
CDT1-202ENST00000562747 ZNF496Q96IT1 587 aaPredicted RBP21.79■■□□□ 1.08
CDT1-202ENST00000562747 FMNL2Q96PY5 1086 aa21.79■■□□□ 1.08
CDT1-202ENST00000562747 COL11A2P13942 1736 aaPredicted RBP21.79■■□□□ 1.08
CDT1-202ENST00000562747 KDM2BQ8NHM5 1336 aa21.79■■□□□ 1.08
CDT1-202ENST00000562747 RRAGCQ9HB90 399 aa21.78■■□□□ 1.08
CDT1-202ENST00000562747 CCDC88AQ3V6T2 1871 aa21.77■■□□□ 1.08
CDT1-202ENST00000562747 PNISRQ8TF01 805 aaKnown RBP21.77■■□□□ 1.08
CDT1-202ENST00000562747 TEX13AQ9BXU3 409 aaPredicted RBP21.77■■□□□ 1.08
CDT1-202ENST00000562747 KCNQ3O43525 872 aa21.76■■□□□ 1.07
CDT1-202ENST00000562747 SERPINB2P05120 415 aa21.76■■□□□ 1.07
CDT1-202ENST00000562747 C16orf71Q8IYS4 520 aaPredicted RBP21.76■■□□□ 1.07
CDT1-202ENST00000562747 MRS2Q9HD23 443 aa21.76■■□□□ 1.07
CDT1-202ENST00000562747 STARD3NLO95772 234 aa21.75■■□□□ 1.07
CDT1-202ENST00000562747 CANXP27824 592 aaKnown RBP21.75■■□□□ 1.07
CDT1-202ENST00000562747 THUMPD2Q9BTF0 503 aaKnown RBP21.75■■□□□ 1.07
CDT1-202ENST00000562747 FSTL1Q12841 308 aa21.74■■□□□ 1.07
CDT1-202ENST00000562747 RRP7AQ9Y3A4 280 aaKnown RBP21.74■■□□□ 1.07
CDT1-202ENST00000562747 NEUROD2Q15784 382 aa21.73■■□□□ 1.07
CDT1-202ENST00000562747 KDM3BQ7LBC6 1761 aa21.73■■□□□ 1.07
CDT1-202ENST00000562747 EIF5P55010 431 aaKnown RBP21.72■■□□□ 1.07
CDT1-202ENST00000562747 BICDL1Q6ZP65 573 aa21.72■■□□□ 1.07
CDT1-202ENST00000562747 C2CD5Q86YS7 1000 aa21.72■■□□□ 1.07
CDT1-202ENST00000562747 KLRG1Q96E93 195 aa21.72■■□□□ 1.07
CDT1-202ENST00000562747 BCORQ6W2J9 1755 aa21.71■■□□□ 1.07
CDT1-202ENST00000562747 NFKBIEO00221 500 aa21.71■■□□□ 1.07
CDT1-202ENST00000562747 TTLL6Q8N841 843 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms