RNA–Protein interactions for RNA: ENST00000562354.2

CLUHP3-206, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 4,117 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-206ENST00000562354 ZSCAN23Q3MJ62 389 aa10.89□□□□□ -0.67
CLUHP3-206ENST00000562354 TTC22Q5TAA0 569 aa10.89□□□□□ -0.67
CLUHP3-206ENST00000562354 TAF3Q5VWG9 929 aa10.89□□□□□ -0.67
CLUHP3-206ENST00000562354 ZNF771Q7L3S4 317 aaPredicted RBP10.89□□□□□ -0.67
CLUHP3-206ENST00000562354 ZMYND15Q9H091 742 aa10.89□□□□□ -0.67
CLUHP3-206ENST00000562354 TMEM94Q12767 1356 aa10.89□□□□□ -0.67
CLUHP3-206ENST00000562354 HIP1O00291 1037 aa10.88□□□□□ -0.67
CLUHP3-206ENST00000562354 ZSCAN31Q96LW9 406 aaPredicted RBP10.88□□□□□ -0.67
CLUHP3-206ENST00000562354 USP31Q70CQ4 1352 aa10.88□□□□□ -0.67
CLUHP3-206ENST00000562354 OVOS2A0A0J9YW53 1432 aa10.88□□□□□ -0.67
CLUHP3-206ENST00000562354 OVOS2Q6IE36 1432 aa10.88□□□□□ -0.67
CLUHP3-206ENST00000562354 SYCE3A1L190 88 aa10.88□□□□□ -0.67
CLUHP3-206ENST00000562354 CHL1O00533 1208 aa10.88□□□□□ -0.67
CLUHP3-206ENST00000562354 ZNF445P59923 1031 aa10.88□□□□□ -0.67
CLUHP3-206ENST00000562354 KRT24Q2M2I5 525 aa10.88□□□□□ -0.67
CLUHP3-206ENST00000562354 CCDC183Q5T5S1 534 aa10.88□□□□□ -0.67
CLUHP3-206ENST00000562354 PTPRCP08575 1304 aa10.88□□□□□ -0.67
CLUHP3-206ENST00000562354 LRRC7Q96NW7 1537 aa10.88□□□□□ -0.67
CLUHP3-206ENST00000562354 MPRIPQ6WCQ1 1025 aa10.88□□□□□ -0.67
CLUHP3-206ENST00000562354 CCDC34Q96HJ3 373 aa10.88□□□□□ -0.67
CLUHP3-206ENST00000562354 MAP3K5Q99683 1374 aa10.88□□□□□ -0.67
CLUHP3-206ENST00000562354 IGSF1Q8N6C5 1336 aa10.87□□□□□ -0.67
CLUHP3-206ENST00000562354 CCDC66A2RUB6 948 aa10.87□□□□□ -0.67
CLUHP3-206ENST00000562354 H3BQV1 296 aa10.87□□□□□ -0.67
CLUHP3-206ENST00000562354 IFFO2Q5TF58 517 aa10.87□□□□□ -0.67
CLUHP3-206ENST00000562354 KIF24Q5T7B8 1368 aa10.87□□□□□ -0.67
CLUHP3-206ENST00000562354 IBTKQ9P2D0 1353 aaPredicted RBP10.87□□□□□ -0.67
CLUHP3-206ENST00000562354 ANAPC15P60006 121 aa10.87□□□□□ -0.67
CLUHP3-206ENST00000562354 UBTFL1P0CB47 393 aaPredicted RBP10.87□□□□□ -0.67
CLUHP3-206ENST00000562354 TOM1L2Q6ZVM7 507 aa10.87□□□□□ -0.67
CLUHP3-206ENST00000562354 COL3A1P02461 1466 aaPredicted RBP10.86□□□□□ -0.67
CLUHP3-206ENST00000562354 VPS37CA5D8V6 355 aaPredicted RBP10.86□□□□□ -0.67
CLUHP3-206ENST00000562354 DDX58O95786 925 aaKnown RBP10.86□□□□□ -0.67
CLUHP3-206ENST00000562354 HSP90B1P14625 803 aaKnown RBP10.86□□□□□ -0.67
CLUHP3-206ENST00000562354 FOXD4L6Q3SYB3 417 aaPredicted RBP10.86□□□□□ -0.67
CLUHP3-206ENST00000562354 FOXD4L3Q6VB84 417 aaPredicted RBP10.86□□□□□ -0.67
CLUHP3-206ENST00000562354 PPP1R9BQ96SB3 815 aa10.86□□□□□ -0.67
CLUHP3-206ENST00000562354 NRXN3Q9Y4C0 1643 aa10.86□□□□□ -0.67
CLUHP3-206ENST00000562354 CHRNA2Q15822 529 aa10.86□□□□□ -0.67
CLUHP3-206ENST00000562354 STRN4Q9NRL3 753 aa10.86□□□□□ -0.67
CLUHP3-206ENST00000562354 NOL7Q9UMY1 257 aaKnown RBP10.86□□□□□ -0.67
CLUHP3-206ENST00000562354 RTL1A6NKG5 1358 aa10.85□□□□□ -0.67
CLUHP3-206ENST00000562354 ANKRD1Q15327 319 aa10.85□□□□□ -0.67
CLUHP3-206ENST00000562354 NBPF6Q5VWK0 638 aa10.85□□□□□ -0.67
CLUHP3-206ENST00000562354 BICD2Q8TD16 824 aa10.85□□□□□ -0.67
CLUHP3-206ENST00000562354 CABLES1Q8TDN4 633 aa10.85□□□□□ -0.67
CLUHP3-206ENST00000562354 NBPF4Q96M43 638 aa10.85□□□□□ -0.67
CLUHP3-206ENST00000562354 NAP1L2Q9ULW6 460 aaPredicted RBP10.85□□□□□ -0.67
CLUHP3-206ENST00000562354 IFIT2P09913 472 aaKnown RBP10.85□□□□□ -0.67
CLUHP3-206ENST00000562354 AKAP4Q5JQC9 854 aa10.85□□□□□ -0.67
CLUHP3-206ENST00000562354 TEX35Q5T0J7 233 aa10.85□□□□□ -0.67
CLUHP3-206ENST00000562354 ARGLU1Q9NWB6 273 aaPredicted RBP10.85□□□□□ -0.67
CLUHP3-206ENST00000562354 ITSN1Q15811 1721 aa10.85□□□□□ -0.67
CLUHP3-206ENST00000562354 KIF20BQ96Q89 1820 aa10.85□□□□□ -0.67
CLUHP3-206ENST00000562354 KRT85P78386 507 aa10.85□□□□□ -0.67
CLUHP3-206ENST00000562354 ZNF853P0CG23 659 aa10.84□□□□□ -0.67
CLUHP3-206ENST00000562354 DDX17Q92841 729 aaKnown RBP10.84□□□□□ -0.67
CLUHP3-206ENST00000562354 NAT10Q9H0A0 1025 aaKnown RBP10.84□□□□□ -0.67
CLUHP3-206ENST00000562354 C9orf78Q9NZ63 289 aaPredicted RBP10.84□□□□□ -0.67
CLUHP3-206ENST00000562354 ERC1Q8IUD2 1116 aa10.84□□□□□ -0.67
CLUHP3-206ENST00000562354 F6X3S4 739 aa10.84□□□□□ -0.67
CLUHP3-206ENST00000562354 NEXNQ0ZGT2 675 aa10.84□□□□□ -0.67
CLUHP3-206ENST00000562354 FLIIQ13045 1269 aa10.84□□□□□ -0.67
CLUHP3-206ENST00000562354 CCDC73Q6ZRK6 1079 aa10.84□□□□□ -0.67
CLUHP3-206ENST00000562354 ANKRD44Q8N8A2 993 aa10.84□□□□□ -0.67
CLUHP3-206ENST00000562354 SETD1BQ9UPS6 1966 aaKnown RBP10.84□□□□□ -0.67
CLUHP3-206ENST00000562354 CCP110O43303 1012 aa10.83□□□□□ -0.68
CLUHP3-206ENST00000562354 DHX37Q8IY37 1157 aaKnown RBP10.83□□□□□ -0.68
CLUHP3-206ENST00000562354 SF3A1Q15459 793 aaKnown RBP10.83□□□□□ -0.68
CLUHP3-206ENST00000562354 CLASRPQ8N2M8 674 aaKnown RBP10.83□□□□□ -0.68
CLUHP3-206ENST00000562354 INTS4Q96HW7 963 aaKnown RBP10.83□□□□□ -0.68
CLUHP3-206ENST00000562354 ZNF330Q9Y3S2 320 aaPredicted RBP10.83□□□□□ -0.68
CLUHP3-206ENST00000562354 KNDC1Q76NI1 1749 aa10.83□□□□□ -0.68
CLUHP3-206ENST00000562354 RAB11FIP3O75154 756 aa10.83□□□□□ -0.68
CLUHP3-206ENST00000562354 AIMP1Q12904 312 aaKnown RBP10.83□□□□□ -0.68
CLUHP3-206ENST00000562354 DCTPP1Q9H773 170 aa10.83□□□□□ -0.68
CLUHP3-206ENST00000562354 USP19O94966 1318 aa10.83□□□□□ -0.68
CLUHP3-206ENST00000562354 KIAA0232Q92628 1395 aa10.83□□□□□ -0.68
CLUHP3-206ENST00000562354 KIF2AO00139 706 aaPredicted RBP10.82□□□□□ -0.68
CLUHP3-206ENST00000562354 FIBPO43427 364 aa10.82□□□□□ -0.68
CLUHP3-206ENST00000562354 CABP4P57796 275 aa10.82□□□□□ -0.68
CLUHP3-206ENST00000562354 GPS2Q13227 327 aa10.82□□□□□ -0.68
CLUHP3-206ENST00000562354 LRRFIP1Q32MZ4 808 aaKnown RBP10.82□□□□□ -0.68
CLUHP3-206ENST00000562354 ARHGEF25Q86VW2 580 aa10.82□□□□□ -0.68
CLUHP3-206ENST00000562354 TRIM5Q9C035 493 aa10.82□□□□□ -0.68
CLUHP3-206ENST00000562354 SH2B1Q9NRF2 756 aaPredicted RBP10.82□□□□□ -0.68
CLUHP3-206ENST00000562354 CYP46A1Q9Y6A2 500 aa10.82□□□□□ -0.68
CLUHP3-206ENST00000562354 MX1P20591 662 aa10.82□□□□□ -0.68
CLUHP3-206ENST00000562354 CCDC112Q8NEF3 446 aa10.82□□□□□ -0.68
CLUHP3-206ENST00000562354 CCDC9Q9Y3X0 531 aaKnown RBP10.82□□□□□ -0.68
CLUHP3-206ENST00000562354 CAVIN2O95810 425 aa10.82□□□□□ -0.68
CLUHP3-206ENST00000562354 GNL2Q13823 731 aaKnown RBP10.82□□□□□ -0.68
CLUHP3-206ENST00000562354 BABAM1Q9NWV8 329 aa10.82□□□□□ -0.68
CLUHP3-206ENST00000562354 RIC3Q7Z5B4 369 aa10.81□□□□□ -0.68
CLUHP3-206ENST00000562354 TPD52L1Q16890 204 aaPredicted RBP10.81□□□□□ -0.68
CLUHP3-206ENST00000562354 ADGRB2O60241 1585 aa10.81□□□□□ -0.68
CLUHP3-206ENST00000562354 SURF6O75683 361 aaKnown RBP10.81□□□□□ -0.68
CLUHP3-206ENST00000562354 IFNL2Q8IZJ0 200 aa10.81□□□□□ -0.68
CLUHP3-206ENST00000562354 ZNF500O60304 480 aaPredicted RBP10.8□□□□□ -0.68
CLUHP3-206ENST00000562354 TNNT3P45378 269 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms