RNA–Protein interactions for RNA: ENST00000561840.1

TRAPPC2L-202, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 5 BASIC

Gene TRAPPC2L, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-202ENST00000561840 VIRMAQ69YN4 1812 aaKnown RBP15.54■□□□□ 0.08
TRAPPC2L-202ENST00000561840 CEMIPQ8WUJ3 1361 aa15.54■□□□□ 0.08
TRAPPC2L-202ENST00000561840 HEG1Q9ULI3 1381 aa15.54■□□□□ 0.08
TRAPPC2L-202ENST00000561840 DPEP1P16444 411 aa15.54■□□□□ 0.08
TRAPPC2L-202ENST00000561840 TM4SF1P30408 202 aa15.54■□□□□ 0.08
TRAPPC2L-202ENST00000561840 BCS1LQ9Y276 419 aa15.54■□□□□ 0.08
TRAPPC2L-202ENST00000561840 COL15A1P39059 1388 aa15.53■□□□□ 0.08
TRAPPC2L-202ENST00000561840 UTRNP46939 3433 aa15.53■□□□□ 0.08
TRAPPC2L-202ENST00000561840 TAF7Q15545 349 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC2L-202ENST00000561840 TJP1Q07157 1748 aa15.52■□□□□ 0.08
TRAPPC2L-202ENST00000561840 KCNQ3O43525 872 aa15.52■□□□□ 0.08
TRAPPC2L-202ENST00000561840 EIF5P55010 431 aaKnown RBP15.52■□□□□ 0.08
TRAPPC2L-202ENST00000561840 DCTN1Q14203 1278 aa15.52■□□□□ 0.08
TRAPPC2L-202ENST00000561840 PIM2Q9P1W9 311 aa15.52■□□□□ 0.08
TRAPPC2L-202ENST00000561840 KCPQ6ZWJ8 1503 aa15.52■□□□□ 0.07
TRAPPC2L-202ENST00000561840 ADAMTS7Q9UKP4 1686 aa15.51■□□□□ 0.07
TRAPPC2L-202ENST00000561840 CICQ96RK0 1608 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC2L-202ENST00000561840 MAPK8IP3Q9UPT6 1336 aa15.51■□□□□ 0.07
TRAPPC2L-202ENST00000561840 POLRMTO00411 1230 aaKnown RBP15.51■□□□□ 0.07
TRAPPC2L-202ENST00000561840 A1BGP04217 495 aa15.51■□□□□ 0.07
TRAPPC2L-202ENST00000561840 SNRPA1P09661 255 aaKnown RBP15.51■□□□□ 0.07
TRAPPC2L-202ENST00000561840 IL6STP40189 918 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC2L-202ENST00000561840 DDR1Q08345 913 aa15.51■□□□□ 0.07
TRAPPC2L-202ENST00000561840 ARHGAP27Q6ZUM4 889 aa15.51■□□□□ 0.07
TRAPPC2L-202ENST00000561840 SERPINB2P05120 415 aa15.5■□□□□ 0.07
TRAPPC2L-202ENST00000561840 NFIXQ14938 502 aa15.5■□□□□ 0.07
TRAPPC2L-202ENST00000561840 BICDL1Q6ZP65 573 aa15.5■□□□□ 0.07
TRAPPC2L-202ENST00000561840 PNISRQ8TF01 805 aaKnown RBP15.5■□□□□ 0.07
TRAPPC2L-202ENST00000561840 TBC1D2BQ9UPU7 963 aa15.5■□□□□ 0.07
TRAPPC2L-202ENST00000561840 USP16Q9Y5T5 823 aa15.5■□□□□ 0.07
TRAPPC2L-202ENST00000561840 NFE2L2Q16236 605 aa15.49■□□□□ 0.07
TRAPPC2L-202ENST00000561840 DALRD3Q5D0E6 543 aaKnown RBP15.49■□□□□ 0.07
TRAPPC2L-202ENST00000561840 C10orf71Q711Q0 1435 aa15.49■□□□□ 0.07
TRAPPC2L-202ENST00000561840 C4AP0C0L4 1744 aa15.48■□□□□ 0.07
TRAPPC2L-202ENST00000561840 PXDNLA1KZ92 1463 aa15.48■□□□□ 0.07
TRAPPC2L-202ENST00000561840 GIGYF1O75420 1035 aaPredicted RBP15.48■□□□□ 0.07
TRAPPC2L-202ENST00000561840 BCL2L12Q9HB09 334 aa15.48■□□□□ 0.07
TRAPPC2L-202ENST00000561840 GOLGB1Q14789 3259 aaKnown RBP15.48■□□□□ 0.07
TRAPPC2L-202ENST00000561840 NPHP1O15259 732 aa15.47■□□□□ 0.07
TRAPPC2L-202ENST00000561840 PLEKHF1Q96S99 279 aa15.47■□□□□ 0.07
TRAPPC2L-202ENST00000561840 GPBP1L1Q9HC44 474 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC2L-202ENST00000561840 MIS18AQ9NYP9 233 aa15.47■□□□□ 0.07
TRAPPC2L-202ENST00000561840 KCNA3P22001 575 aa15.46■□□□□ 0.07
TRAPPC2L-202ENST00000561840 CHRNA5P30532 468 aa15.46■□□□□ 0.07
TRAPPC2L-202ENST00000561840 DZIP3Q86Y13 1208 aaKnown RBP15.46■□□□□ 0.07
TRAPPC2L-202ENST00000561840 SETDB2Q96T68 719 aa15.46■□□□□ 0.07
TRAPPC2L-202ENST00000561840 MYBBP1AQ9BQG0 1328 aaKnown RBP15.45■□□□□ 0.06
TRAPPC2L-202ENST00000561840 UBR2Q8IWV8 1755 aa15.45■□□□□ 0.06
TRAPPC2L-202ENST00000561840 H0YIN7 160 aa15.45■□□□□ 0.06
TRAPPC2L-202ENST00000561840 C1QTNF8P60827 252 aa15.45■□□□□ 0.06
TRAPPC2L-202ENST00000561840 TBC1D9BQ66K14 1250 aa15.45■□□□□ 0.06
TRAPPC2L-202ENST00000561840 ZNF526Q8TF50 670 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC2L-202ENST00000561840 N4BP2Q86UW6 1770 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC2L-202ENST00000561840 PRAMEF22A3QJZ6 481 aa15.44■□□□□ 0.06
TRAPPC2L-202ENST00000561840 RIPK4P57078 832 aa15.44■□□□□ 0.06
TRAPPC2L-202ENST00000561840 WDR43Q15061 677 aaKnown RBP eCLIP15.44■□□□□ 0.06
TRAPPC2L-202ENST00000561840 KIF13BQ9NQT8 1826 aa15.44■□□□□ 0.06
TRAPPC2L-202ENST00000561840 ZEB1P37275 1124 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC2L-202ENST00000561840 PIP4K2AP48426 406 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC2L-202ENST00000561840 C2CD5Q86YS7 1000 aa15.43■□□□□ 0.06
TRAPPC2L-202ENST00000561840 PDZRN3Q9UPQ7 1066 aa15.43■□□□□ 0.06
TRAPPC2L-202ENST00000561840 ZNF652Q9Y2D9 606 aa15.43■□□□□ 0.06
TRAPPC2L-202ENST00000561840 SIPA1L3O60292 1781 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC2L-202ENST00000561840 ATP10DQ9P241 1426 aa15.43■□□□□ 0.06
TRAPPC2L-202ENST00000561840 CAMTA2O94983 1202 aa15.42■□□□□ 0.06
TRAPPC2L-202ENST00000561840 PDE6BP35913 854 aa15.42■□□□□ 0.06
TRAPPC2L-202ENST00000561840 LMOD3Q0VAK6 560 aa15.42■□□□□ 0.06
TRAPPC2L-202ENST00000561840 CLEC4GQ6UXB4 293 aa15.42■□□□□ 0.06
TRAPPC2L-202ENST00000561840 TTLL6Q8N841 843 aa15.41■□□□□ 0.06
TRAPPC2L-202ENST00000561840 THUMPD2Q9BTF0 503 aaKnown RBP15.41■□□□□ 0.06
TRAPPC2L-202ENST00000561840 TMPOP42166 694 aaKnown RBP15.4■□□□□ 0.06
TRAPPC2L-202ENST00000561840 EIF4A1P60842 406 aaKnown RBP15.4■□□□□ 0.06
TRAPPC2L-202ENST00000561840 ST5P78524 1137 aa15.4■□□□□ 0.06
TRAPPC2L-202ENST00000561840 NEUROD2Q15784 382 aa15.4■□□□□ 0.06
TRAPPC2L-202ENST00000561840 NGEFQ8N5V2 710 aa15.4■□□□□ 0.06
TRAPPC2L-202ENST00000561840 ZNF622Q969S3 477 aaKnown RBP eCLIP15.4■□□□□ 0.065e-7■□□□□ 9.2
TRAPPC2L-202ENST00000561840 BRIP1Q9BX63 1249 aa15.4■□□□□ 0.06
TRAPPC2L-202ENST00000561840 TSPYL4Q9UJ04 414 aa15.4■□□□□ 0.06
TRAPPC2L-202ENST00000561840 RRP7AQ9Y3A4 280 aaKnown RBP15.4■□□□□ 0.06
TRAPPC2L-202ENST00000561840 CARMIL3Q8ND23 1372 aa15.39■□□□□ 0.05
TRAPPC2L-202ENST00000561840 C9orf131Q5VYM1 1079 aa15.39■□□□□ 0.05
TRAPPC2L-202ENST00000561840 NBPF5PQ86XG9 351 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC2L-202ENST00000561840 CNBD1Q8NA66 436 aa15.39■□□□□ 0.05
TRAPPC2L-202ENST00000561840 SENP3-EIF4A1A0A087X0R7 540 aa15.38■□□□□ 0.05
TRAPPC2L-202ENST00000561840 NBPF26B4DH59 902 aa15.38■□□□□ 0.05
TRAPPC2L-202ENST00000561840 PRR5LQ6MZQ0 368 aa15.38■□□□□ 0.05
TRAPPC2L-202ENST00000561840 NBPF10Q6P3W6 841 aaKnown RBP15.38■□□□□ 0.05
TRAPPC2L-202ENST00000561840 TPTE2Q6XPS3 522 aa15.38■□□□□ 0.05
TRAPPC2L-202ENST00000561840 CCDC146Q8IYE0 955 aa15.38■□□□□ 0.05
TRAPPC2L-202ENST00000561840 CCDC24Q8N4L8 307 aa15.38■□□□□ 0.05
TRAPPC2L-202ENST00000561840 NBPF15Q8N660 670 aa15.38■□□□□ 0.05
TRAPPC2L-202ENST00000561840 RUNDC1Q96C34 613 aa15.38■□□□□ 0.05
TRAPPC2L-202ENST00000561840 GTF2E1P29083 439 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC2L-202ENST00000561840 PRKRIP1Q9H875 184 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC2L-202ENST00000561840 BABAM1Q9NWV8 329 aa15.37■□□□□ 0.05
TRAPPC2L-202ENST00000561840 RNF181Q9P0P0 153 aa15.37■□□□□ 0.05
TRAPPC2L-202ENST00000561840 NIP7Q9Y221 180 aaKnown RBP eCLIP15.37■□□□□ 0.05
TRAPPC2L-202ENST00000561840 ADCY9O60503 1353 aa15.36■□□□□ 0.05
TRAPPC2L-202ENST00000561840 AFDNP55196 1824 aaKnown RBP15.36■□□□□ 0.05
TRAPPC2L-202ENST00000561840 RGL2O15211 777 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms