RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 PNISRQ8TF01 805 aaKnown RBP26.17■■□□□ 1.78
TSPAN3-210ENST00000561277 ZBTB1Q9Y2K1 713 aa26.17■■□□□ 1.78
TSPAN3-210ENST00000561277 C4AP0C0L4 1744 aa26.17■■□□□ 1.78
TSPAN3-210ENST00000561277 KDM3BQ7LBC6 1761 aa26.17■■□□□ 1.78
TSPAN3-210ENST00000561277 RFC4P35249 363 aa26.16■■□□□ 1.78
TSPAN3-210ENST00000561277 APAF1O14727 1248 aa26.16■■□□□ 1.78
TSPAN3-210ENST00000561277 PRAMEF22A3QJZ6 481 aa26.15■■□□□ 1.78
TSPAN3-210ENST00000561277 CANXP27824 592 aaKnown RBP26.15■■□□□ 1.78
TSPAN3-210ENST00000561277 TEX13AQ9BXU3 409 aaPredicted RBP26.15■■□□□ 1.78
TSPAN3-210ENST00000561277 TRIM35Q9UPQ4 493 aa26.15■■□□□ 1.78
TSPAN3-210ENST00000561277 SOS1Q07889 1333 aaPredicted RBP26.13■■□□□ 1.77
TSPAN3-210ENST00000561277 KLHL34Q8N239 644 aa26.13■■□□□ 1.77
TSPAN3-210ENST00000561277 FHDC1Q9C0D6 1143 aaPredicted RBP26.13■■□□□ 1.77
TSPAN3-210ENST00000561277 SNRPA1P09661 255 aaKnown RBP26.12■■□□□ 1.77
TSPAN3-210ENST00000561277 TSPYL4Q9UJ04 414 aa26.12■■□□□ 1.77
TSPAN3-210ENST00000561277 SRP68Q9UHB9 627 aaKnown RBP26.12■■□□□ 1.77
TSPAN3-210ENST00000561277 COL15A1P39059 1388 aa26.12■■□□□ 1.77
TSPAN3-210ENST00000561277 SENP3-EIF4A1A0A087X0R7 540 aa26.11■■□□□ 1.77
TSPAN3-210ENST00000561277 ZNF330Q9Y3S2 320 aaPredicted RBP26.11■■□□□ 1.77
TSPAN3-210ENST00000561277 USP16Q9Y5T5 823 aa26.11■■□□□ 1.77
TSPAN3-210ENST00000561277 A1BGP04217 495 aa26.09■■□□□ 1.77
TSPAN3-210ENST00000561277 GYS1P13807 737 aa26.09■■□□□ 1.77
TSPAN3-210ENST00000561277 LAS1LQ9Y4W2 734 aaKnown RBP26.09■■□□□ 1.77
TSPAN3-210ENST00000561277 USP42Q9H9J4 1324 aaKnown RBP26.09■■□□□ 1.77
TSPAN3-210ENST00000561277 EIF4A1P60842 406 aaKnown RBP26.08■■□□□ 1.77
TSPAN3-210ENST00000561277 SYT17Q9BSW7 474 aa26.07■■□□□ 1.76
TSPAN3-210ENST00000561277 PIP4K2AP48426 406 aaPredicted RBP26.07■■□□□ 1.76
TSPAN3-210ENST00000561277 LAMB4A4D0S4 1761 aa26.06■■□□□ 1.76
TSPAN3-210ENST00000561277 ZPR1O75312 459 aa26.06■■□□□ 1.76
TSPAN3-210ENST00000561277 MMP10P09238 476 aa26.06■■□□□ 1.76
TSPAN3-210ENST00000561277 FAM9BQ8IZU0 186 aa26.06■■□□□ 1.76
TSPAN3-210ENST00000561277 NLGN1Q8N2Q7 840 aa26.06■■□□□ 1.76
TSPAN3-210ENST00000561277 EIF5P55010 431 aaKnown RBP26.05■■□□□ 1.76
TSPAN3-210ENST00000561277 USPL1Q5W0Q7 1092 aa26.05■■□□□ 1.76
TSPAN3-210ENST00000561277 GIGYF1O75420 1035 aaPredicted RBP26.04■■□□□ 1.76
TSPAN3-210ENST00000561277 BABAM1Q9NWV8 329 aa26.04■■□□□ 1.76
TSPAN3-210ENST00000561277 IL6STP40189 918 aaPredicted RBP26.03■■□□□ 1.76
TSPAN3-210ENST00000561277 FKBP8Q14318 412 aa26.03■■□□□ 1.76
TSPAN3-210ENST00000561277 NPM2Q86SE8 214 aaKnown RBP26.03■■□□□ 1.76
TSPAN3-210ENST00000561277 NARFQ9UHQ1 456 aa26.02■■□□□ 1.76
TSPAN3-210ENST00000561277 A0A087WZG4 1122 aa26.01■■□□□ 1.75
TSPAN3-210ENST00000561277 CHL1O00533 1208 aa26.01■■□□□ 1.75
TSPAN3-210ENST00000561277 TBC1D2BQ9UPU7 963 aa26■■□□□ 1.75
TSPAN3-210ENST00000561277 NBPF26B4DH59 902 aa25.99■■□□□ 1.75
TSPAN3-210ENST00000561277 NBPF10Q6P3W6 841 aaKnown RBP25.99■■□□□ 1.75
TSPAN3-210ENST00000561277 NBPF15Q8N660 670 aa25.99■■□□□ 1.75
TSPAN3-210ENST00000561277 NLGN2Q8NFZ4 835 aa25.99■■□□□ 1.75
TSPAN3-210ENST00000561277 CALD1Q05682 793 aaKnown RBP25.98■■□□□ 1.75
TSPAN3-210ENST00000561277 CFAP44Q96MT7 982 aa25.98■■□□□ 1.75
TSPAN3-210ENST00000561277 PARP3Q9Y6F1 533 aa25.98■■□□□ 1.75
TSPAN3-210ENST00000561277 SCN7AQ01118 1682 aa25.97■■□□□ 1.75
TSPAN3-210ENST00000561277 GOLGB1Q14789 3259 aaKnown RBP25.97■■□□□ 1.75
TSPAN3-210ENST00000561277 KRT24Q2M2I5 525 aa25.97■■□□□ 1.75
TSPAN3-210ENST00000561277 SALL2Q9Y467 1007 aaPredicted RBP25.97■■□□□ 1.75
TSPAN3-210ENST00000561277 DZIP3Q86Y13 1208 aaKnown RBP25.96■■□□□ 1.75
TSPAN3-210ENST00000561277 BCL2L12Q9HB09 334 aa25.96■■□□□ 1.75
TSPAN3-210ENST00000561277 MBIPQ9NS73 344 aa25.95■■□□□ 1.75
TSPAN3-210ENST00000561277 EIF2S2P20042 333 aaKnown RBP25.95■■□□□ 1.74
TSPAN3-210ENST00000561277 DDR1Q08345 913 aa25.95■■□□□ 1.74
TSPAN3-210ENST00000561277 IFT57Q9NWB7 429 aa25.95■■□□□ 1.74
TSPAN3-210ENST00000561277 CD2APQ9Y5K6 639 aa25.95■■□□□ 1.74
TSPAN3-210ENST00000561277 DIEXFQ68CQ4 756 aaKnown RBP25.94■■□□□ 1.74
TSPAN3-210ENST00000561277 ZNF853P0CG23 659 aa25.93■■□□□ 1.74
TSPAN3-210ENST00000561277 MYL6BP14649 208 aa25.93■■□□□ 1.74
TSPAN3-210ENST00000561277 GNAI1P63096 354 aa25.93■■□□□ 1.74
TSPAN3-210ENST00000561277 CCDC27Q2M243 656 aa25.93■■□□□ 1.74
TSPAN3-210ENST00000561277 WWC1Q8IX03 1113 aa25.93■■□□□ 1.74
TSPAN3-210ENST00000561277 NGEFQ8N5V2 710 aa25.93■■□□□ 1.74
TSPAN3-210ENST00000561277 NFIXQ14938 502 aa25.92■■□□□ 1.74
TSPAN3-210ENST00000561277 BICDL1Q6ZP65 573 aa25.92■■□□□ 1.74
TSPAN3-210ENST00000561277 NECTIN2Q92692 538 aa25.92■■□□□ 1.74
TSPAN3-210ENST00000561277 BCORQ6W2J9 1755 aa25.92■■□□□ 1.74
TSPAN3-210ENST00000561277 UTRNP46939 3433 aa25.92■■□□□ 1.74
TSPAN3-210ENST00000561277 DCAF8L1A6NGE4 600 aa25.91■■□□□ 1.74
TSPAN3-210ENST00000561277 CAMTA2O94983 1202 aa25.91■■□□□ 1.74
TSPAN3-210ENST00000561277 TM4SF1P30408 202 aa25.91■■□□□ 1.74
TSPAN3-210ENST00000561277 POLRMTO00411 1230 aaKnown RBP25.9■■□□□ 1.74
TSPAN3-210ENST00000561277 C10orf71Q711Q0 1435 aa25.9■■□□□ 1.74
TSPAN3-210ENST00000561277 TBC1D9BQ66K14 1250 aa25.89■■□□□ 1.73
TSPAN3-210ENST00000561277 PELP1Q8IZL8 1130 aaKnown RBP25.89■■□□□ 1.73
TSPAN3-210ENST00000561277 CCER2I3L3R5 266 aa25.88■■□□□ 1.73
TSPAN3-210ENST00000561277 ERBB4Q15303 1308 aa25.88■■□□□ 1.73
TSPAN3-210ENST00000561277 KIF13BQ9NQT8 1826 aa25.87■■□□□ 1.73
TSPAN3-210ENST00000561277 NCBP3Q53F19 620 aaKnown RBP25.86■■□□□ 1.73
TSPAN3-210ENST00000561277 ANXA1P04083 346 aa25.86■■□□□ 1.73
TSPAN3-210ENST00000561277 DUSP27Q5VZP5 1158 aa25.86■■□□□ 1.73
TSPAN3-210ENST00000561277 TSR2Q969E8 191 aaKnown RBP25.86■■□□□ 1.73
TSPAN3-210ENST00000561277 WWC3Q9ULE0 1092 aa25.86■■□□□ 1.73
TSPAN3-210ENST00000561277 SERPINB2P05120 415 aa25.85■■□□□ 1.73
TSPAN3-210ENST00000561277 PDIA6Q15084 440 aa25.85■■□□□ 1.73
TSPAN3-210ENST00000561277 GPR162Q16538 588 aa25.85■■□□□ 1.73
TSPAN3-210ENST00000561277 PROSER3Q2NL68 480 aa25.85■■□□□ 1.73
TSPAN3-210ENST00000561277 HDGFL1Q5TGJ6 251 aa25.85■■□□□ 1.73
TSPAN3-210ENST00000561277 ZNF652Q9Y2D9 606 aa25.85■■□□□ 1.73
TSPAN3-210ENST00000561277 AFDNP55196 1824 aaKnown RBP25.85■■□□□ 1.73
TSPAN3-210ENST00000561277 ELL2O00472 640 aaPredicted RBP25.84■■□□□ 1.73
TSPAN3-210ENST00000561277 TTLL7Q6ZT98 887 aa25.84■■□□□ 1.73
TSPAN3-210ENST00000561277 HOXB7P09629 217 aa25.83■■□□□ 1.73
TSPAN3-210ENST00000561277 KIF6Q6ZMV9 814 aa25.83■■□□□ 1.73
TSPAN3-210ENST00000561277 CARMIL3Q8ND23 1372 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms