RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 MAP3K10Q02779 954 aa3.76□□□□□ -1.81
RNF111-211ENST00000560952 CENPCQ03188 943 aa3.76□□□□□ -1.81
RNF111-211ENST00000560952 RHBDD1Q8TEB9 315 aa3.76□□□□□ -1.81
RNF111-211ENST00000560952 GLMNQ92990 594 aa3.76□□□□□ -1.81
RNF111-211ENST00000560952 CCDC9Q9Y3X0 531 aaKnown RBP3.76□□□□□ -1.81
RNF111-211ENST00000560952 A0A1B0GTH6 734 aa3.76□□□□□ -1.81
RNF111-211ENST00000560952 POM121CA8CG34 1229 aa3.76□□□□□ -1.81
RNF111-211ENST00000560952 GDF10P55107 478 aa3.76□□□□□ -1.81
RNF111-211ENST00000560952 GTF2IP78347 998 aa3.76□□□□□ -1.81
RNF111-211ENST00000560952 PSME1Q06323 249 aa3.76□□□□□ -1.81
RNF111-211ENST00000560952 NCOA4Q13772 614 aa3.76□□□□□ -1.81
RNF111-211ENST00000560952 TLR1Q15399 786 aa3.76□□□□□ -1.81
RNF111-211ENST00000560952 NBPF10Q6P3W6 841 aaKnown RBP3.76□□□□□ -1.81
RNF111-211ENST00000560952 C1orf216Q8TAB5 229 aa3.76□□□□□ -1.81
RNF111-211ENST00000560952 TIMMDC1Q9NPL8 285 aa3.76□□□□□ -1.81
RNF111-211ENST00000560952 HRH3Q9Y5N1 445 aa3.76□□□□□ -1.81
RNF111-211ENST00000560952 PPARGC1BQ86YN6 1023 aaKnown RBP3.75□□□□□ -1.81
RNF111-211ENST00000560952 ETNK1Q9HBU6 452 aa3.75□□□□□ -1.81
RNF111-211ENST00000560952 RAB6BQ9NRW1 208 aa3.75□□□□□ -1.81
RNF111-211ENST00000560952 COL17A1Q9UMD9 1497 aaPredicted RBP3.74□□□□□ -1.81
RNF111-211ENST00000560952 USP17L3A6NCW0 530 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 USP17L4A6NCW7 530 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 M0R2N6 131 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 PIK3CDO00329 1044 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 F11P03951 625 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 SMTNP53814 917 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 POU4F2Q12837 409 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 TSGA10IPQ3SY00 556 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 USP17L2Q6R6M4 530 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 USP17L1Q7RTZ2 530 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 TRIM22Q8IYM9 498 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 LARGE2Q8N3Y3 721 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 PKNOX2Q96KN3 472 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 TRERF1Q96PN7 1200 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 SLC4A9Q96Q91 983 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 FHDC1Q9C0D6 1143 aaPredicted RBP3.74□□□□□ -1.81
RNF111-211ENST00000560952 PHF24Q9UPV7 400 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 CHMP3Q9Y3E7 222 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 CDC14CA4D256 554 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 PALM3A6NDB9 673 aaPredicted RBP3.74□□□□□ -1.81
RNF111-211ENST00000560952 CDK2AP1O14519 115 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 CSB-PGBD3P0DP91 1061 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 PGBD3Q8N328 593 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 NIFKQ9BYG3 293 aaKnown RBP3.74□□□□□ -1.81
RNF111-211ENST00000560952 NSFL1CQ9UNZ2 370 aaKnown RBP3.74□□□□□ -1.81
RNF111-211ENST00000560952 PCDHGA11Q9Y5H2 935 aa3.74□□□□□ -1.81
RNF111-211ENST00000560952 SENP3-EIF4A1A0A087X0R7 540 aa3.73□□□□□ -1.81
RNF111-211ENST00000560952 A6NJY4 79 aa3.73□□□□□ -1.81
RNF111-211ENST00000560952 RHOQP17081 205 aa3.73□□□□□ -1.81
RNF111-211ENST00000560952 SCNN1DP51172 638 aa3.73□□□□□ -1.81
RNF111-211ENST00000560952 MTFR1Q15390 333 aa3.73□□□□□ -1.81
RNF111-211ENST00000560952 NBPF1Q3BBV0 1214 aa3.73□□□□□ -1.81
RNF111-211ENST00000560952 LARP1Q6PKG0 1096 aaKnown RBP3.73□□□□□ -1.81
RNF111-211ENST00000560952 TBC1D9Q6ZT07 1266 aa3.73□□□□□ -1.81
RNF111-211ENST00000560952 ADAMTS19Q8TE59 1207 aa3.73□□□□□ -1.81
RNF111-211ENST00000560952 CNTNAP3BQ96NU0 1288 aa3.73□□□□□ -1.81
RNF111-211ENST00000560952 CNTNAP3Q9BZ76 1288 aa3.73□□□□□ -1.81
RNF111-211ENST00000560952 ZMYND15Q9H091 742 aa3.73□□□□□ -1.81
RNF111-211ENST00000560952 DNAAF2Q9NVR5 837 aaKnown RBP3.73□□□□□ -1.81
RNF111-211ENST00000560952 TATP17735 454 aaPredicted RBP3.73□□□□□ -1.81
RNF111-211ENST00000560952 EFHC2Q5JST6 749 aa3.73□□□□□ -1.81
RNF111-211ENST00000560952 FIGNL1Q6PIW4 674 aa3.73□□□□□ -1.81
RNF111-211ENST00000560952 RIPOR1Q6ZS17 1223 aa3.73□□□□□ -1.81
RNF111-211ENST00000560952 VWA5B2Q8N398 1253 aa3.73□□□□□ -1.81
RNF111-211ENST00000560952 UCN2Q96RP3 112 aa3.73□□□□□ -1.81
RNF111-211ENST00000560952 GAS2L1Q99501 681 aaPredicted RBP3.73□□□□□ -1.81
RNF111-211ENST00000560952 PPP1R12CQ9BZL4 782 aa3.73□□□□□ -1.81
RNF111-211ENST00000560952 ZDHHC3Q9NYG2 299 aa3.73□□□□□ -1.81
RNF111-211ENST00000560952 MKRN1Q9UHC7 482 aaKnown RBP3.73□□□□□ -1.81
RNF111-211ENST00000560952 GPC6Q9Y625 555 aaPredicted RBP3.73□□□□□ -1.81
RNF111-211ENST00000560952 TMEM229AB2RXF0 380 aa3.72□□□□□ -1.81
RNF111-211ENST00000560952 C4orf17Q53FE4 359 aa3.72□□□□□ -1.81
RNF111-211ENST00000560952 SIX5Q8N196 739 aa3.72□□□□□ -1.81
RNF111-211ENST00000560952 GAS2L2Q8NHY3 880 aa3.72□□□□□ -1.81
RNF111-211ENST00000560952 NUCKS1Q9H1E3 243 aaKnown RBP3.72□□□□□ -1.81
RNF111-211ENST00000560952 TFIP11Q9UBB9 837 aaKnown RBP3.72□□□□□ -1.81
RNF111-211ENST00000560952 MAFBQ9Y5Q3 323 aaPredicted RBP3.72□□□□□ -1.81
RNF111-211ENST00000560952 CCDC102BQ68D86 513 aa3.71□□□□□ -1.81
RNF111-211ENST00000560952 OGFOD1Q8N543 542 aa3.71□□□□□ -1.81
RNF111-211ENST00000560952 ZNF837Q96EG3 531 aaPredicted RBP3.71□□□□□ -1.81
RNF111-211ENST00000560952 POLR3GLQ9BT43 218 aa3.71□□□□□ -1.81
RNF111-211ENST00000560952 CFHR5Q9BXR6 569 aa3.71□□□□□ -1.81
RNF111-211ENST00000560952 CRISPLD1Q9H336 500 aa3.71□□□□□ -1.81
RNF111-211ENST00000560952 SEMA6BQ9H3T3 888 aa3.71□□□□□ -1.81
RNF111-211ENST00000560952 VRTNQ9H8Y1 702 aa3.71□□□□□ -1.81
RNF111-211ENST00000560952 ZNF358Q9NW07 568 aa3.71□□□□□ -1.81
RNF111-211ENST00000560952 SERTAD1Q9UHV2 236 aa3.71□□□□□ -1.81
RNF111-211ENST00000560952 DEPDC4Q8N2C3 294 aa3.71□□□□□ -1.82
RNF111-211ENST00000560952 TPCN2Q8NHX9 752 aa3.71□□□□□ -1.82
RNF111-211ENST00000560952 PUS7Q96PZ0 661 aaKnown RBP3.71□□□□□ -1.82
RNF111-211ENST00000560952 COL25A1Q9BXS0 654 aaPredicted RBP3.71□□□□□ -1.82
RNF111-211ENST00000560952 MBIPQ9NS73 344 aa3.71□□□□□ -1.82
RNF111-211ENST00000560952 CABP1Q9NZU7 370 aa3.71□□□□□ -1.82
RNF111-211ENST00000560952 FAM196BA6NMK8 535 aa3.7□□□□□ -1.82
RNF111-211ENST00000560952 RASA1P20936 1047 aa3.7□□□□□ -1.82
RNF111-211ENST00000560952 PLA2G4AP47712 749 aa3.7□□□□□ -1.82
RNF111-211ENST00000560952 SEC13P55735 322 aa3.7□□□□□ -1.82
RNF111-211ENST00000560952 SRSF11Q05519 484 aaKnown RBP3.7□□□□□ -1.82
RNF111-211ENST00000560952 HIF1AQ16665 826 aa3.7□□□□□ -1.82
RNF111-211ENST00000560952 NLRP8Q86W28 1048 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms