RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 NEUROD2Q15784 382 aa20.38■□□□□ 0.85
RABGGTA-219ENST00000560871 TRAPPC3LQ5T215 181 aa20.38■□□□□ 0.85
RABGGTA-219ENST00000560871 C4AP0C0L4 1744 aa20.38■□□□□ 0.85
RABGGTA-219ENST00000560871 ADRA2BP18089 450 aa20.37■□□□□ 0.85
RABGGTA-219ENST00000560871 FMNL2Q96PY5 1086 aa20.37■□□□□ 0.85
RABGGTA-219ENST00000560871 CRKLP46109 303 aaKnown RBP20.36■□□□□ 0.85
RABGGTA-219ENST00000560871 DIEXFQ68CQ4 756 aaKnown RBP20.36■□□□□ 0.85
RABGGTA-219ENST00000560871 ARHGEF1Q92888 912 aaKnown RBP20.36■□□□□ 0.85
RABGGTA-219ENST00000560871 CD2APQ9Y5K6 639 aa20.36■□□□□ 0.85
RABGGTA-219ENST00000560871 CYP19A1P11511 503 aaPredicted RBP20.35■□□□□ 0.85
RABGGTA-219ENST00000560871 MIS18AQ9NYP9 233 aa20.35■□□□□ 0.85
RABGGTA-219ENST00000560871 LAMB4A4D0S4 1761 aa20.35■□□□□ 0.85
RABGGTA-219ENST00000560871 CCER2I3L3R5 266 aa20.34■□□□□ 0.85
RABGGTA-219ENST00000560871 GPR162Q16538 588 aa20.34■□□□□ 0.85
RABGGTA-219ENST00000560871 INTS5Q6P9B9 1019 aaKnown RBP20.33■□□□□ 0.85
RABGGTA-219ENST00000560871 FAM9BQ8IZU0 186 aa20.32■□□□□ 0.84
RABGGTA-219ENST00000560871 CCDC87Q9NVE4 849 aa20.32■□□□□ 0.84
RABGGTA-219ENST00000560871 BABAM1Q9NWV8 329 aa20.32■□□□□ 0.84
RABGGTA-219ENST00000560871 ZBTB1Q9Y2K1 713 aa20.32■□□□□ 0.84
RABGGTA-219ENST00000560871 KIF13BQ9NQT8 1826 aa20.32■□□□□ 0.84
RABGGTA-219ENST00000560871 PRAMEF22A3QJZ6 481 aa20.31■□□□□ 0.84
RABGGTA-219ENST00000560871 RFC4P35249 363 aa20.31■□□□□ 0.84
RABGGTA-219ENST00000560871 EIF4A1P60842 406 aaKnown RBP20.31■□□□□ 0.84
RABGGTA-219ENST00000560871 NCBP3Q53F19 620 aaKnown RBP20.31■□□□□ 0.84
RABGGTA-219ENST00000560871 NLGN1Q8N2Q7 840 aa20.31■□□□□ 0.84
RABGGTA-219ENST00000560871 TSPYL4Q9UJ04 414 aa20.31■□□□□ 0.84
RABGGTA-219ENST00000560871 SOS1Q07889 1333 aaPredicted RBP20.3■□□□□ 0.84
RABGGTA-219ENST00000560871 GYS1P13807 737 aa20.3■□□□□ 0.84
RABGGTA-219ENST00000560871 CCDC27Q2M243 656 aa20.3■□□□□ 0.84
RABGGTA-219ENST00000560871 TEX13AQ9BXU3 409 aaPredicted RBP20.3■□□□□ 0.84
RABGGTA-219ENST00000560871 MMP10P09238 476 aa20.29■□□□□ 0.84
RABGGTA-219ENST00000560871 SNRPA1P09661 255 aaKnown RBP20.29■□□□□ 0.84
RABGGTA-219ENST00000560871 PELP1Q8IZL8 1130 aaKnown RBP20.29■□□□□ 0.84
RABGGTA-219ENST00000560871 CHL1O00533 1208 aa20.28■□□□□ 0.84
RABGGTA-219ENST00000560871 STARD3NLO95772 234 aa20.28■□□□□ 0.84
RABGGTA-219ENST00000560871 COL15A1P39059 1388 aa20.27■□□□□ 0.84
RABGGTA-219ENST00000560871 SENP3-EIF4A1A0A087X0R7 540 aa20.27■□□□□ 0.84
RABGGTA-219ENST00000560871 ZNF853P0CG23 659 aa20.27■□□□□ 0.84
RABGGTA-219ENST00000560871 YBX3P16989 372 aaKnown RBP eCLIP20.27■□□□□ 0.84
RABGGTA-219ENST00000560871 USP16Q9Y5T5 823 aa20.27■□□□□ 0.84
RABGGTA-219ENST00000560871 KIAA1551Q9HCM1 1747 aa20.27■□□□□ 0.83
RABGGTA-219ENST00000560871 GIGYF1O75420 1035 aaPredicted RBP20.26■□□□□ 0.83
RABGGTA-219ENST00000560871 CFAP44Q96MT7 982 aa20.26■□□□□ 0.83
RABGGTA-219ENST00000560871 USP42Q9H9J4 1324 aaKnown RBP20.26■□□□□ 0.83
RABGGTA-219ENST00000560871 MIER1Q8N108 512 aa20.25■□□□□ 0.83
RABGGTA-219ENST00000560871 IFT57Q9NWB7 429 aa20.25■□□□□ 0.83
RABGGTA-219ENST00000560871 SRP68Q9UHB9 627 aaKnown RBP20.25■□□□□ 0.83
RABGGTA-219ENST00000560871 SCN7AQ01118 1682 aa20.25■□□□□ 0.83
RABGGTA-219ENST00000560871 GRIN3BO60391 1043 aa20.24■□□□□ 0.83
RABGGTA-219ENST00000560871 CALD1Q05682 793 aaKnown RBP20.24■□□□□ 0.83
RABGGTA-219ENST00000560871 WWC1Q8IX03 1113 aa20.24■□□□□ 0.83
RABGGTA-219ENST00000560871 N4BP2Q86UW6 1770 aaPredicted RBP20.23■□□□□ 0.83
RABGGTA-219ENST00000560871 EIF5P55010 431 aaKnown RBP20.23■□□□□ 0.83
RABGGTA-219ENST00000560871 MBIPQ9NS73 344 aa20.23■□□□□ 0.83
RABGGTA-219ENST00000560871 A1BGP04217 495 aa20.22■□□□□ 0.83
RABGGTA-219ENST00000560871 CANXP27824 592 aaKnown RBP20.22■□□□□ 0.83
RABGGTA-219ENST00000560871 IL6STP40189 918 aaPredicted RBP20.22■□□□□ 0.83
RABGGTA-219ENST00000560871 FKBP8Q14318 412 aa20.22■□□□□ 0.83
RABGGTA-219ENST00000560871 LAS1LQ9Y4W2 734 aaKnown RBP20.22■□□□□ 0.83
RABGGTA-219ENST00000560871 PARP3Q9Y6F1 533 aa20.22■□□□□ 0.83
RABGGTA-219ENST00000560871 BCORQ6W2J9 1755 aa20.21■□□□□ 0.83
RABGGTA-219ENST00000560871 C10orf71Q711Q0 1435 aa20.21■□□□□ 0.83
RABGGTA-219ENST00000560871 GNAI1P63096 354 aa20.21■□□□□ 0.83
RABGGTA-219ENST00000560871 TM4SF1P30408 202 aa20.2■□□□□ 0.82
RABGGTA-219ENST00000560871 KRT24Q2M2I5 525 aa20.2■□□□□ 0.82
RABGGTA-219ENST00000560871 USPL1Q5W0Q7 1092 aa20.2■□□□□ 0.82
RABGGTA-219ENST00000560871 NARFQ9UHQ1 456 aa20.2■□□□□ 0.82
RABGGTA-219ENST00000560871 PXDNLA1KZ92 1463 aa20.19■□□□□ 0.82
RABGGTA-219ENST00000560871 NBPF26B4DH59 902 aa20.19■□□□□ 0.82
RABGGTA-219ENST00000560871 ZPR1O75312 459 aa20.19■□□□□ 0.82
RABGGTA-219ENST00000560871 PIP4K2AP48426 406 aaPredicted RBP20.19■□□□□ 0.82
RABGGTA-219ENST00000560871 TGFB2P61812 414 aa20.19■□□□□ 0.82
RABGGTA-219ENST00000560871 NBPF10Q6P3W6 841 aaKnown RBP20.19■□□□□ 0.82
RABGGTA-219ENST00000560871 NGEFQ8N5V2 710 aa20.19■□□□□ 0.82
RABGGTA-219ENST00000560871 NBPF15Q8N660 670 aa20.19■□□□□ 0.82
RABGGTA-219ENST00000560871 ZNF784Q8NCA9 323 aaPredicted RBP20.19■□□□□ 0.82
RABGGTA-219ENST00000560871 BRCA1P38398 1863 aaKnown RBP20.19■□□□□ 0.82
RABGGTA-219ENST00000560871 IL16Q14005 1332 aa20.19■□□□□ 0.82
RABGGTA-219ENST00000560871 DDR1Q08345 913 aa20.18■□□□□ 0.82
RABGGTA-219ENST00000560871 ZNF521Q96K83 1311 aa20.18■□□□□ 0.82
RABGGTA-219ENST00000560871 AFDNP55196 1824 aaKnown RBP20.18■□□□□ 0.82
RABGGTA-219ENST00000560871 SALL2Q9Y467 1007 aaPredicted RBP20.17■□□□□ 0.82
RABGGTA-219ENST00000560871 ERBB4Q15303 1308 aa20.17■□□□□ 0.82
RABGGTA-219ENST00000560871 NRXN2Q9P2S2 1712 aa20.16■□□□□ 0.82
RABGGTA-219ENST00000560871 HOXB7P09629 217 aa20.16■□□□□ 0.82
RABGGTA-219ENST00000560871 WDR63Q8IWG1 891 aa20.16■□□□□ 0.82
RABGGTA-219ENST00000560871 BCL2L12Q9HB09 334 aa20.16■□□□□ 0.82
RABGGTA-219ENST00000560871 A0A087WZG4 1122 aa20.15■□□□□ 0.82
RABGGTA-219ENST00000560871 A0A0G2JLW4 131 aa20.15■□□□□ 0.82
RABGGTA-219ENST00000560871 POLRMTO00411 1230 aaKnown RBP20.15■□□□□ 0.82
RABGGTA-219ENST00000560871 WWC3Q9ULE0 1092 aa20.15■□□□□ 0.82
RABGGTA-219ENST00000560871 LRP10Q7Z4F1 713 aa20.14■□□□□ 0.81
RABGGTA-219ENST00000560871 TSR2Q969E8 191 aaKnown RBP20.14■□□□□ 0.81
RABGGTA-219ENST00000560871 ZNF330Q9Y3S2 320 aaPredicted RBP20.14■□□□□ 0.81
RABGGTA-219ENST00000560871 CAMTA2O94983 1202 aa20.13■□□□□ 0.81
RABGGTA-219ENST00000560871 DPEP1P16444 411 aa20.13■□□□□ 0.81
RABGGTA-219ENST00000560871 PDIA6Q15084 440 aa20.13■□□□□ 0.81
RABGGTA-219ENST00000560871 FANCIQ9NVI1 1328 aa20.12■□□□□ 0.81
RABGGTA-219ENST00000560871 ARFGEF1Q9Y6D6 1849 aa20.12■□□□□ 0.81
RABGGTA-219ENST00000560871 EIF2S2P20042 333 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms