RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 KDM3BQ7LBC6 1761 aa15.93■□□□□ 0.14
USP8-212ENST00000560730 C4AP0C0L4 1744 aa15.92■□□□□ 0.14
USP8-212ENST00000560730 APAF1O14727 1248 aa15.92■□□□□ 0.14
USP8-212ENST00000560730 TRAPPC3LQ5T215 181 aa15.92■□□□□ 0.14
USP8-212ENST00000560730 ARXQ96QS3 562 aa15.91■□□□□ 0.14
USP8-212ENST00000560730 ZBTB1Q9Y2K1 713 aa15.91■□□□□ 0.14
USP8-212ENST00000560730 SENP3-EIF4A1A0A087X0R7 540 aa15.9■□□□□ 0.14
USP8-212ENST00000560730 USP16Q9Y5T5 823 aa15.9■□□□□ 0.14
USP8-212ENST00000560730 SOS1Q07889 1333 aaPredicted RBP15.89■□□□□ 0.13
USP8-212ENST00000560730 STARD3NLO95772 234 aa15.89■□□□□ 0.13
USP8-212ENST00000560730 A1BGP04217 495 aa15.89■□□□□ 0.13
USP8-212ENST00000560730 POLD1P28340 1107 aa15.89■□□□□ 0.13
USP8-212ENST00000560730 LMOD3Q0VAK6 560 aa15.89■□□□□ 0.13
USP8-212ENST00000560730 SRP68Q9UHB9 627 aaKnown RBP15.89■□□□□ 0.13
USP8-212ENST00000560730 CANXP27824 592 aaKnown RBP15.88■□□□□ 0.13
USP8-212ENST00000560730 RFC4P35249 363 aa15.88■□□□□ 0.13
USP8-212ENST00000560730 TEX13AQ9BXU3 409 aaPredicted RBP15.88■□□□□ 0.13
USP8-212ENST00000560730 FHDC1Q9C0D6 1143 aaPredicted RBP15.88■□□□□ 0.13
USP8-212ENST00000560730 SNRPA1P09661 255 aaKnown RBP15.87■□□□□ 0.13
USP8-212ENST00000560730 EIF4A1P60842 406 aaKnown RBP15.87■□□□□ 0.13
USP8-212ENST00000560730 GYS1P13807 737 aa15.86■□□□□ 0.13
USP8-212ENST00000560730 PIP4K2AP48426 406 aaPredicted RBP15.86■□□□□ 0.13
USP8-212ENST00000560730 COL15A1P39059 1388 aa15.85■□□□□ 0.13
USP8-212ENST00000560730 EIF5P55010 431 aaKnown RBP15.85■□□□□ 0.13
USP8-212ENST00000560730 SYT17Q9BSW7 474 aa15.85■□□□□ 0.13
USP8-212ENST00000560730 TSPYL4Q9UJ04 414 aa15.85■□□□□ 0.13
USP8-212ENST00000560730 USP42Q9H9J4 1324 aaKnown RBP15.85■□□□□ 0.13
USP8-212ENST00000560730 GIGYF1O75420 1035 aaPredicted RBP15.85■□□□□ 0.13
USP8-212ENST00000560730 LAS1LQ9Y4W2 734 aaKnown RBP15.85■□□□□ 0.13
USP8-212ENST00000560730 CHL1O00533 1208 aa15.84■□□□□ 0.13
USP8-212ENST00000560730 MMP10P09238 476 aa15.84■□□□□ 0.13
USP8-212ENST00000560730 FKBP8Q14318 412 aa15.84■□□□□ 0.13
USP8-212ENST00000560730 USPL1Q5W0Q7 1092 aa15.84■□□□□ 0.13
USP8-212ENST00000560730 KLHL34Q8N239 644 aa15.84■□□□□ 0.13
USP8-212ENST00000560730 LAMB4A4D0S4 1761 aa15.83■□□□□ 0.12
USP8-212ENST00000560730 NBPF26B4DH59 902 aa15.83■□□□□ 0.12
USP8-212ENST00000560730 NBPF10Q6P3W6 841 aaKnown RBP15.83■□□□□ 0.12
USP8-212ENST00000560730 FAM9BQ8IZU0 186 aa15.83■□□□□ 0.12
USP8-212ENST00000560730 NLGN1Q8N2Q7 840 aa15.83■□□□□ 0.12
USP8-212ENST00000560730 NBPF15Q8N660 670 aa15.83■□□□□ 0.12
USP8-212ENST00000560730 ZNF330Q9Y3S2 320 aaPredicted RBP15.83■□□□□ 0.12
USP8-212ENST00000560730 ZPR1O75312 459 aa15.82■□□□□ 0.12
USP8-212ENST00000560730 BCL2L12Q9HB09 334 aa15.82■□□□□ 0.12
USP8-212ENST00000560730 BABAM1Q9NWV8 329 aa15.82■□□□□ 0.12
USP8-212ENST00000560730 NARFQ9UHQ1 456 aa15.82■□□□□ 0.12
USP8-212ENST00000560730 IL6STP40189 918 aaPredicted RBP15.81■□□□□ 0.12
USP8-212ENST00000560730 KRT24Q2M2I5 525 aa15.81■□□□□ 0.12
USP8-212ENST00000560730 NLGN2Q8NFZ4 835 aa15.81■□□□□ 0.12
USP8-212ENST00000560730 TBC1D2BQ9UPU7 963 aa15.81■□□□□ 0.12
USP8-212ENST00000560730 ZNF853P0CG23 659 aa15.8■□□□□ 0.12
USP8-212ENST00000560730 TM4SF1P30408 202 aa15.79■□□□□ 0.12
USP8-212ENST00000560730 DDR1Q08345 913 aa15.79■□□□□ 0.12
USP8-212ENST00000560730 CFAP44Q96MT7 982 aa15.79■□□□□ 0.12
USP8-212ENST00000560730 A0A087WZG4 1122 aa15.78■□□□□ 0.12
USP8-212ENST00000560730 MBIPQ9NS73 344 aa15.78■□□□□ 0.12
USP8-212ENST00000560730 SALL2Q9Y467 1007 aaPredicted RBP15.78■□□□□ 0.12
USP8-212ENST00000560730 CAMTA2O94983 1202 aa15.77■□□□□ 0.12
USP8-212ENST00000560730 NFIXQ14938 502 aa15.77■□□□□ 0.12
USP8-212ENST00000560730 DZIP3Q86Y13 1208 aaKnown RBP15.77■□□□□ 0.12
USP8-212ENST00000560730 WWC1Q8IX03 1113 aa15.77■□□□□ 0.12
USP8-212ENST00000560730 PARP3Q9Y6F1 533 aa15.77■□□□□ 0.12
USP8-212ENST00000560730 AFDNP55196 1824 aaKnown RBP15.77■□□□□ 0.12
USP8-212ENST00000560730 SCN7AQ01118 1682 aa15.77■□□□□ 0.11
USP8-212ENST00000560730 EIF2S2P20042 333 aaKnown RBP15.77■□□□□ 0.11
USP8-212ENST00000560730 CCDC27Q2M243 656 aa15.77■□□□□ 0.11
USP8-212ENST00000560730 DIEXFQ68CQ4 756 aaKnown RBP15.77■□□□□ 0.11
USP8-212ENST00000560730 IFT57Q9NWB7 429 aa15.77■□□□□ 0.11
USP8-212ENST00000560730 CD2APQ9Y5K6 639 aa15.77■□□□□ 0.11
USP8-212ENST00000560730 KIF13BQ9NQT8 1826 aa15.76■□□□□ 0.11
USP8-212ENST00000560730 BCORQ6W2J9 1755 aa15.76■□□□□ 0.11
USP8-212ENST00000560730 POLRMTO00411 1230 aaKnown RBP15.76■□□□□ 0.11
USP8-212ENST00000560730 GNAI1P63096 354 aa15.76■□□□□ 0.11
USP8-212ENST00000560730 NGEFQ8N5V2 710 aa15.76■□□□□ 0.11
USP8-212ENST00000560730 NECTIN2Q92692 538 aa15.76■□□□□ 0.11
USP8-212ENST00000560730 MYL6BP14649 208 aa15.75■□□□□ 0.11
USP8-212ENST00000560730 CALD1Q05682 793 aaKnown RBP15.75■□□□□ 0.11
USP8-212ENST00000560730 PDIA6Q15084 440 aa15.75■□□□□ 0.11
USP8-212ENST00000560730 TBC1D9BQ66K14 1250 aa15.75■□□□□ 0.11
USP8-212ENST00000560730 BICDL1Q6ZP65 573 aa15.75■□□□□ 0.11
USP8-212ENST00000560730 NPM2Q86SE8 214 aaKnown RBP15.75■□□□□ 0.11
USP8-212ENST00000560730 N4BP2Q86UW6 1770 aaPredicted RBP15.74■□□□□ 0.11
USP8-212ENST00000560730 ANXA1P04083 346 aa15.74■□□□□ 0.11
USP8-212ENST00000560730 PROSER3Q2NL68 480 aa15.74■□□□□ 0.11
USP8-212ENST00000560730 KIAA1551Q9HCM1 1747 aa15.73■□□□□ 0.11
USP8-212ENST00000560730 CCER2I3L3R5 266 aa15.73■□□□□ 0.11
USP8-212ENST00000560730 NCBP3Q53F19 620 aaKnown RBP15.73■□□□□ 0.11
USP8-212ENST00000560730 DUSP27Q5VZP5 1158 aa15.73■□□□□ 0.11
USP8-212ENST00000560730 TTLL7Q6ZT98 887 aa15.73■□□□□ 0.11
USP8-212ENST00000560730 LRP10Q7Z4F1 713 aa15.73■□□□□ 0.11
USP8-212ENST00000560730 NUP98P52948 1817 aa15.73■□□□□ 0.11
USP8-212ENST00000560730 C10orf71Q711Q0 1435 aa15.72■□□□□ 0.11
USP8-212ENST00000560730 ELL2O00472 640 aaPredicted RBP15.72■□□□□ 0.11
USP8-212ENST00000560730 MIER1Q8N108 512 aa15.72■□□□□ 0.11
USP8-212ENST00000560730 TSR2Q969E8 191 aaKnown RBP15.72■□□□□ 0.11
USP8-212ENST00000560730 NRXN2Q9P2S2 1712 aa15.72■□□□□ 0.11
USP8-212ENST00000560730 ERBB4Q15303 1308 aa15.71■□□□□ 0.11
USP8-212ENST00000560730 SERPINB2P05120 415 aa15.71■□□□□ 0.11
USP8-212ENST00000560730 HLFQ16534 295 aa15.71■□□□□ 0.11
USP8-212ENST00000560730 C8orf58Q8NAV2 365 aa15.71■□□□□ 0.11
USP8-212ENST00000560730 WWC3Q9ULE0 1092 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms