RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 FKBP8Q14318 412 aa13.72□□□□□ -0.21
SNRPA1-212ENST00000560496 CCDC87Q9NVE4 849 aa13.72□□□□□ -0.21
SNRPA1-212ENST00000560496 ZBTB1Q9Y2K1 713 aa13.72□□□□□ -0.21
SNRPA1-212ENST00000560496 KDM3BQ7LBC6 1761 aa13.72□□□□□ -0.21
SNRPA1-212ENST00000560496 ARFGEF2Q9Y6D5 1785 aa13.71□□□□□ -0.21
SNRPA1-212ENST00000560496 CACNA1SQ13698 1873 aa13.71□□□□□ -0.21
SNRPA1-212ENST00000560496 TNRC6CQ9HCJ0 1690 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-212ENST00000560496 SENP3-EIF4A1A0A087X0R7 540 aa13.7□□□□□ -0.22
SNRPA1-212ENST00000560496 A0A0G2JLW4 131 aa13.7□□□□□ -0.22
SNRPA1-212ENST00000560496 POLRMTO00411 1230 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-212ENST00000560496 KCNA3P22001 575 aa13.7□□□□□ -0.22
SNRPA1-212ENST00000560496 CNGB1Q14028 1251 aaPredicted RBP13.7□□□□□ -0.22
SNRPA1-212ENST00000560496 PARP3Q9Y6F1 533 aa13.7□□□□□ -0.22
SNRPA1-212ENST00000560496 U2SURPO15042 1029 aaKnown RBP13.69□□□□□ -0.22
SNRPA1-212ENST00000560496 DPEP1P16444 411 aa13.69□□□□□ -0.22
SNRPA1-212ENST00000560496 VSIG10Q8N0Z9 540 aa13.69□□□□□ -0.22
SNRPA1-212ENST00000560496 RSPH6AQ9H0K4 717 aa13.69□□□□□ -0.22
SNRPA1-212ENST00000560496 CARMIL3Q8ND23 1372 aa13.69□□□□□ -0.22
SNRPA1-212ENST00000560496 HEG1Q9ULI3 1381 aa13.69□□□□□ -0.22
SNRPA1-212ENST00000560496 TM4SF1P30408 202 aa13.68□□□□□ -0.22
SNRPA1-212ENST00000560496 USPL1Q5W0Q7 1092 aa13.68□□□□□ -0.22
SNRPA1-212ENST00000560496 GAS2L2Q8NHY3 880 aa13.68□□□□□ -0.22
SNRPA1-212ENST00000560496 BCS1LQ9Y276 419 aa13.68□□□□□ -0.22
SNRPA1-212ENST00000560496 GNAT3A8MTJ3 354 aa13.67□□□□□ -0.22
SNRPA1-212ENST00000560496 IL17REQ8NFR9 667 aa13.67□□□□□ -0.22
SNRPA1-212ENST00000560496 ZNF526Q8TF50 670 aaPredicted RBP13.67□□□□□ -0.22
SNRPA1-212ENST00000560496 BCL2L12Q9HB09 334 aa13.67□□□□□ -0.22
SNRPA1-212ENST00000560496 GPBP1L1Q9HC44 474 aaPredicted RBP13.67□□□□□ -0.22
SNRPA1-212ENST00000560496 PRKAR2BP31323 418 aa13.66□□□□□ -0.22
SNRPA1-212ENST00000560496 ZNF496Q96IT1 587 aaPredicted RBP13.66□□□□□ -0.22
SNRPA1-212ENST00000560496 PHACTR3Q96KR7 559 aa13.66□□□□□ -0.22
SNRPA1-212ENST00000560496 NARFQ9UHQ1 456 aa13.66□□□□□ -0.22
SNRPA1-212ENST00000560496 CCDC88AQ3V6T2 1871 aa13.65□□□□□ -0.22
SNRPA1-212ENST00000560496 PPP2R1AP30153 589 aa13.65□□□□□ -0.22
SNRPA1-212ENST00000560496 ZNF790Q6PG37 636 aa13.65□□□□□ -0.22
SNRPA1-212ENST00000560496 FER1L6Q2WGJ9 1857 aa13.64□□□□□ -0.23
SNRPA1-212ENST00000560496 KIF3CO14782 793 aa13.64□□□□□ -0.23
SNRPA1-212ENST00000560496 ZPR1O75312 459 aa13.64□□□□□ -0.23
SNRPA1-212ENST00000560496 FCHSD2O94868 740 aa13.64□□□□□ -0.23
SNRPA1-212ENST00000560496 CHRNA5P30532 468 aa13.64□□□□□ -0.23
SNRPA1-212ENST00000560496 TEFQ10587 303 aa13.64□□□□□ -0.23
SNRPA1-212ENST00000560496 NFIXQ14938 502 aa13.64□□□□□ -0.23
SNRPA1-212ENST00000560496 TTC5Q8N0Z6 440 aa13.64□□□□□ -0.23
SNRPA1-212ENST00000560496 WDR90Q96KV7 1748 aa13.64□□□□□ -0.23
SNRPA1-212ENST00000560496 DICER1Q9UPY3 1922 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-212ENST00000560496 EIF5P55010 431 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-212ENST00000560496 CFAP53Q96M91 514 aa13.63□□□□□ -0.23
SNRPA1-212ENST00000560496 CANXP27824 592 aaKnown RBP13.62□□□□□ -0.23
SNRPA1-212ENST00000560496 PIM2Q9P1W9 311 aa13.62□□□□□ -0.23
SNRPA1-212ENST00000560496 KCNQ3O43525 872 aa13.61□□□□□ -0.23
SNRPA1-212ENST00000560496 STARD3NLO95772 234 aa13.6□□□□□ -0.23
SNRPA1-212ENST00000560496 ARHGAP27Q6ZUM4 889 aa13.6□□□□□ -0.23
SNRPA1-212ENST00000560496 FMNL2Q96PY5 1086 aa13.6□□□□□ -0.23
SNRPA1-212ENST00000560496 SERPINB2P05120 415 aa13.59□□□□□ -0.23
SNRPA1-212ENST00000560496 U2AF1L5P0DN76 240 aaPredicted RBP13.59□□□□□ -0.23
SNRPA1-212ENST00000560496 U2AF1Q01081 240 aaKnown RBP eCLIP13.59□□□□□ -0.23
SNRPA1-212ENST00000560496 DALRD3Q5D0E6 543 aaKnown RBP13.59□□□□□ -0.23
SNRPA1-212ENST00000560496 NUDCQ9Y266 331 aa13.59□□□□□ -0.23
SNRPA1-212ENST00000560496 NUP98P52948 1817 aa13.58□□□□□ -0.24
SNRPA1-212ENST00000560496 SLX4Q8IY92 1834 aa13.58□□□□□ -0.24
SNRPA1-212ENST00000560496 PRAMEF22A3QJZ6 481 aa13.58□□□□□ -0.24
SNRPA1-212ENST00000560496 BTBD11A6QL63 1104 aa13.58□□□□□ -0.24
SNRPA1-212ENST00000560496 IL6STP40189 918 aaPredicted RBP13.58□□□□□ -0.24
SNRPA1-212ENST00000560496 RASSF7Q02833 373 aa13.58□□□□□ -0.24
SNRPA1-212ENST00000560496 C9orf131Q5VYM1 1079 aa13.58□□□□□ -0.24
SNRPA1-212ENST00000560496 TBC1D9BQ66K14 1250 aa13.58□□□□□ -0.24
SNRPA1-212ENST00000560496 MCM10Q7L590 875 aa13.58□□□□□ -0.24
SNRPA1-212ENST00000560496 A0A087WZG4 1122 aa13.57□□□□□ -0.24
SNRPA1-212ENST00000560496 CAMTA2O94983 1202 aa13.57□□□□□ -0.24
SNRPA1-212ENST00000560496 A1BGP04217 495 aa13.57□□□□□ -0.24
SNRPA1-212ENST00000560496 HSPA6P17066 643 aa13.57□□□□□ -0.24
SNRPA1-212ENST00000560496 DCTN1Q14203 1278 aa13.57□□□□□ -0.24
SNRPA1-212ENST00000560496 TEX13AQ9BXU3 409 aaPredicted RBP13.57□□□□□ -0.24
SNRPA1-212ENST00000560496 NMRK2Q9NPI5 230 aa13.57□□□□□ -0.24
SNRPA1-212ENST00000560496 PRELPP51888 382 aa13.56□□□□□ -0.24
SNRPA1-212ENST00000560496 BICDL1Q6ZP65 573 aa13.56□□□□□ -0.24
SNRPA1-212ENST00000560496 RNF181Q9P0P0 153 aa13.56□□□□□ -0.24
SNRPA1-212ENST00000560496 TBC1D2BQ9UPU7 963 aa13.56□□□□□ -0.24
SNRPA1-212ENST00000560496 ANKRD36CQ5JPF3 1778 aa13.55□□□□□ -0.24
SNRPA1-212ENST00000560496 PIP4K2AP48426 406 aaPredicted RBP13.55□□□□□ -0.24
SNRPA1-212ENST00000560496 C1QBPQ07021 282 aaKnown RBP13.55□□□□□ -0.24
SNRPA1-212ENST00000560496 PRR5LQ6MZQ0 368 aa13.55□□□□□ -0.24
SNRPA1-212ENST00000560496 ZNF330Q9Y3S2 320 aaPredicted RBP13.55□□□□□ -0.24
SNRPA1-212ENST00000560496 USP16Q9Y5T5 823 aa13.55□□□□□ -0.24
SNRPA1-212ENST00000560496 NFKBIEO00221 500 aa13.54□□□□□ -0.24
SNRPA1-212ENST00000560496 PLEKHF1Q96S99 279 aa13.54□□□□□ -0.24
SNRPA1-212ENST00000560496 PCNTO95613 3336 aa13.54□□□□□ -0.24
SNRPA1-212ENST00000560496 HTATSF1O43719 755 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-212ENST00000560496 DZIP3Q86Y13 1208 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-212ENST00000560496 C2CD5Q86YS7 1000 aa13.53□□□□□ -0.24
SNRPA1-212ENST00000560496 RTF1Q92541 710 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-212ENST00000560496 ZC3H4Q9UPT8 1303 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-212ENST00000560496 NBPF26B4DH59 902 aa13.52□□□□□ -0.25
SNRPA1-212ENST00000560496 TOMM70O94826 608 aa13.52□□□□□ -0.25
SNRPA1-212ENST00000560496 NBPF10Q6P3W6 841 aaKnown RBP13.52□□□□□ -0.25
SNRPA1-212ENST00000560496 CCDC24Q8N4L8 307 aa13.52□□□□□ -0.25
SNRPA1-212ENST00000560496 NBPF15Q8N660 670 aa13.52□□□□□ -0.25
SNRPA1-212ENST00000560496 TTLL6Q8N841 843 aa13.52□□□□□ -0.25
SNRPA1-212ENST00000560496 SNRPA1P09661 255 aaKnown RBP13.51□□□□□ -0.25
SNRPA1-212ENST00000560496 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms