RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 DBF4Q9UBU7 674 aaPredicted RBP15.55■□□□□ 0.08
HERC1-205ENST00000559886 USP16Q9Y5T5 823 aa15.55■□□□□ 0.08
HERC1-205ENST00000559886 BTAF1O14981 1849 aa15.55■□□□□ 0.08
HERC1-205ENST00000559886 KRT27Q7Z3Y8 459 aa15.55■□□□□ 0.08
HERC1-205ENST00000559886 CRBNQ96SW2 442 aa15.55■□□□□ 0.08
HERC1-205ENST00000559886 G2E3Q7L622 706 aa15.54■□□□□ 0.08
HERC1-205ENST00000559886 CLUAP1Q96AJ1 413 aa15.54■□□□□ 0.08
HERC1-205ENST00000559886 POTEAQ6S8J7 498 aa15.54■□□□□ 0.08
HERC1-205ENST00000559886 FTSJ3Q8IY81 847 aaKnown RBP15.54■□□□□ 0.08
HERC1-205ENST00000559886 EXOC6Q8TAG9 804 aa15.54■□□□□ 0.08
HERC1-205ENST00000559886 API5Q9BZZ5 524 aaKnown RBP15.54■□□□□ 0.08
HERC1-205ENST00000559886 RGS12O14924 1447 aa15.53■□□□□ 0.08
HERC1-205ENST00000559886 FLIIQ13045 1269 aa15.53■□□□□ 0.08
HERC1-205ENST00000559886 PDIA6Q15084 440 aa15.53■□□□□ 0.08
HERC1-205ENST00000559886 RBM42Q9BTD8 480 aaKnown RBP15.53■□□□□ 0.08
HERC1-205ENST00000559886 DDX21Q9NR30 783 aaKnown RBP eCLIP15.53■□□□□ 0.08
HERC1-205ENST00000559886 SMARCC1Q92922 1105 aaPredicted RBP15.52■□□□□ 0.08
HERC1-205ENST00000559886 TEX13AQ9BXU3 409 aaPredicted RBP15.52■□□□□ 0.08
HERC1-205ENST00000559886 TJP1Q07157 1748 aa15.52■□□□□ 0.08
HERC1-205ENST00000559886 CICQ96RK0 1608 aaPredicted RBP15.52■□□□□ 0.07
HERC1-205ENST00000559886 ZNF831Q5JPB2 1677 aa15.52■□□□□ 0.07
HERC1-205ENST00000559886 FAM196AQ6ZSG2 479 aa15.52■□□□□ 0.07
HERC1-205ENST00000559886 SLC4A9Q96Q91 983 aa15.52■□□□□ 0.07
HERC1-205ENST00000559886 ABCC4O15439 1325 aa15.52■□□□□ 0.07
HERC1-205ENST00000559886 PROSER3Q2NL68 480 aa15.51■□□□□ 0.07
HERC1-205ENST00000559886 PTF1AQ7RTS3 328 aa15.51■□□□□ 0.07
HERC1-205ENST00000559886 PHAXQ9H814 394 aaKnown RBP15.51■□□□□ 0.07
HERC1-205ENST00000559886 HYPKQ9NX55 129 aa15.51■□□□□ 0.07
HERC1-205ENST00000559886 COG6Q9Y2V7 657 aa15.51■□□□□ 0.07
HERC1-205ENST00000559886 ERBB4Q15303 1308 aa15.51■□□□□ 0.07
HERC1-205ENST00000559886 ANXA1P04083 346 aa15.51■□□□□ 0.07
HERC1-205ENST00000559886 PALLDQ8WX93 1383 aa15.51■□□□□ 0.07
HERC1-205ENST00000559886 EP400Q96L91 3159 aa15.5■□□□□ 0.07
HERC1-205ENST00000559886 MVPQ14764 893 aaKnown RBP15.5■□□□□ 0.07
HERC1-205ENST00000559886 DNAJC10Q8IXB1 793 aa15.5■□□□□ 0.07
HERC1-205ENST00000559886 TMEM57Q8N5G2 664 aa15.5■□□□□ 0.07
HERC1-205ENST00000559886 FKBP5Q13451 457 aaPredicted RBP15.49■□□□□ 0.07
HERC1-205ENST00000559886 N4BP2Q86UW6 1770 aaPredicted RBP15.49■□□□□ 0.07
HERC1-205ENST00000559886 LOC102724428A0A0B4J2F2 783 aa15.49■□□□□ 0.07
HERC1-205ENST00000559886 SIK1P57059 783 aa15.49■□□□□ 0.07
HERC1-205ENST00000559886 LRP10Q7Z4F1 713 aa15.49■□□□□ 0.07
HERC1-205ENST00000559886 ILDR1Q86SU0 546 aaPredicted RBP15.49■□□□□ 0.07
HERC1-205ENST00000559886 BCL11BQ9C0K0 894 aaPredicted RBP15.49■□□□□ 0.07
HERC1-205ENST00000559886 PPP4R2Q9NY27 417 aa15.49■□□□□ 0.07
HERC1-205ENST00000559886 STARD3NLO95772 234 aa15.48■□□□□ 0.07
HERC1-205ENST00000559886 NBPF26B4DH59 902 aa15.48■□□□□ 0.07
HERC1-205ENST00000559886 NBPF14Q5TI25 921 aa15.48■□□□□ 0.07
HERC1-205ENST00000559886 NBPF10Q6P3W6 841 aaKnown RBP15.48■□□□□ 0.07
HERC1-205ENST00000559886 NBPF15Q8N660 670 aa15.48■□□□□ 0.07
HERC1-205ENST00000559886 LY75O60449 1722 aa15.47■□□□□ 0.07
HERC1-205ENST00000559886 A1BGP04217 495 aa15.47■□□□□ 0.07
HERC1-205ENST00000559886 MYL6BP14649 208 aa15.47■□□□□ 0.07
HERC1-205ENST00000559886 INTS3Q68E01 1043 aaKnown RBP15.47■□□□□ 0.07
HERC1-205ENST00000559886 ITPRIPQ8IWB1 547 aa15.47■□□□□ 0.07
HERC1-205ENST00000559886 COL5A3P25940 1745 aaPredicted RBP15.47■□□□□ 0.07
HERC1-205ENST00000559886 F6X3S4 739 aa15.46■□□□□ 0.07
HERC1-205ENST00000559886 CYP19A1P11511 503 aaPredicted RBP15.46■□□□□ 0.07
HERC1-205ENST00000559886 DDX19BQ9UMR2 479 aa15.46■□□□□ 0.07
HERC1-205ENST00000559886 ATP6V1AP38606 617 aa15.46■□□□□ 0.07
HERC1-205ENST00000559886 PIP4K2AP48426 406 aaPredicted RBP15.46■□□□□ 0.07
HERC1-205ENST00000559886 PXDNLA1KZ92 1463 aa15.46■□□□□ 0.06
HERC1-205ENST00000559886 AAMPQ13685 434 aa15.45■□□□□ 0.06
HERC1-205ENST00000559886 RREB1Q92766 1687 aa15.45■□□□□ 0.06
HERC1-205ENST00000559886 MYH14Q7Z406 1995 aaKnown RBP15.44■□□□□ 0.06
HERC1-205ENST00000559886 PI4KAP2A4QPH2 592 aa15.44■□□□□ 0.06
HERC1-205ENST00000559886 COPS6Q7L5N1 327 aa15.44■□□□□ 0.06
HERC1-205ENST00000559886 PI4KAP1Q8N8J0 262 aa15.44■□□□□ 0.06
HERC1-205ENST00000559886 XAGE3Q8WTP9 111 aa15.44■□□□□ 0.06
HERC1-205ENST00000559886 ADCY9O60503 1353 aa15.44■□□□□ 0.06
HERC1-205ENST00000559886 DDX58O95786 925 aaKnown RBP15.44■□□□□ 0.06
HERC1-205ENST00000559886 ITPK1Q13572 414 aa15.44■□□□□ 0.06
HERC1-205ENST00000559886 KSR2Q6VAB6 950 aa15.44■□□□□ 0.06
HERC1-205ENST00000559886 CCT4P50991 539 aaKnown RBP15.43■□□□□ 0.06
HERC1-205ENST00000559886 AIMP1Q12904 312 aaKnown RBP15.43■□□□□ 0.06
HERC1-205ENST00000559886 SLC4A10Q6U841 1118 aa15.43■□□□□ 0.06
HERC1-205ENST00000559886 TRIM37O94972 964 aa15.43■□□□□ 0.06
HERC1-205ENST00000559886 DNAAF4Q8WXU2 420 aa15.43■□□□□ 0.06
HERC1-205ENST00000559886 TAF1LQ8IZX4 1826 aa15.43■□□□□ 0.06
HERC1-205ENST00000559886 ZBTB7BO15156 539 aaPredicted RBP15.42■□□□□ 0.06
HERC1-205ENST00000559886 ARFGEF2Q9Y6D5 1785 aa15.42■□□□□ 0.06
HERC1-205ENST00000559886 CHMP4BQ9H444 224 aaKnown RBP15.42■□□□□ 0.06
HERC1-205ENST00000559886 MAP3K2Q9Y2U5 619 aa15.42■□□□□ 0.06
HERC1-205ENST00000559886 NUP188Q5SRE5 1749 aa15.41■□□□□ 0.06
HERC1-205ENST00000559886 ANKRD13DQ6ZTN6 518 aa15.41■□□□□ 0.06
HERC1-205ENST00000559886 ZBTB40Q9NUA8 1239 aa15.41■□□□□ 0.06
HERC1-205ENST00000559886 ATP10DQ9P241 1426 aa15.41■□□□□ 0.06
HERC1-205ENST00000559886 INTS5Q6P9B9 1019 aaKnown RBP15.41■□□□□ 0.06
HERC1-205ENST00000559886 ZBTB1Q9Y2K1 713 aa15.41■□□□□ 0.06
HERC1-205ENST00000559886 CRKLP46109 303 aaKnown RBP15.4■□□□□ 0.06
HERC1-205ENST00000559886 CCDC87Q9NVE4 849 aa15.4■□□□□ 0.06
HERC1-205ENST00000559886 B4GALNT3Q6L9W6 998 aa15.4■□□□□ 0.06
HERC1-205ENST00000559886 RIC3Q7Z5B4 369 aa15.4■□□□□ 0.06
HERC1-205ENST00000559886 CCDC136Q96JN2 1154 aa15.4■□□□□ 0.06
HERC1-205ENST00000559886 IL6STP40189 918 aaPredicted RBP15.39■□□□□ 0.05
HERC1-205ENST00000559886 BEND3Q5T5X7 828 aa15.39■□□□□ 0.05
HERC1-205ENST00000559886 LINC00116Q8NCU8 138 aa15.39■□□□□ 0.05
HERC1-205ENST00000559886 PLBD2Q8NHP8 589 aa15.39■□□□□ 0.05
HERC1-205ENST00000559886 CCNL1Q9UK58 526 aaPredicted RBP15.39■□□□□ 0.05
HERC1-205ENST00000559886 TTLL7Q6ZT98 887 aa15.39■□□□□ 0.05
HERC1-205ENST00000559886 KCNQ4P56696 695 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms