RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 KCNQ4P56696 695 aa21.24■□□□□ 0.99
TPM1-219ENST00000559397 CAMKK2Q96RR4 588 aa21.24■□□□□ 0.99
TPM1-219ENST00000559397 TEX13AQ9BXU3 409 aaPredicted RBP21.24■□□□□ 0.99
TPM1-219ENST00000559397 LRRC4BQ9NT99 713 aa21.24■□□□□ 0.99
TPM1-219ENST00000559397 RARSP54136 660 aaKnown RBP21.23■□□□□ 0.99
TPM1-219ENST00000559397 EN1Q05925 392 aaPredicted RBP21.23■□□□□ 0.99
TPM1-219ENST00000559397 TXNRD1Q16881 649 aa21.23■□□□□ 0.99
TPM1-219ENST00000559397 SLC27A3Q5K4L6 730 aa21.23■□□□□ 0.99
TPM1-219ENST00000559397 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.23■□□□□ 0.99
TPM1-219ENST00000559397 TAF1LQ8IZX4 1826 aa21.23■□□□□ 0.99
TPM1-219ENST00000559397 BCAR3O75815 825 aa21.21■□□□□ 0.99
TPM1-219ENST00000559397 BAG6P46379 1132 aa21.21■□□□□ 0.99
TPM1-219ENST00000559397 DEFB132Q7Z7B7 95 aa21.21■□□□□ 0.99
TPM1-219ENST00000559397 CYP19A1P11511 503 aaPredicted RBP21.21■□□□□ 0.99
TPM1-219ENST00000559397 EZH2Q15910 746 aaKnown RBP21.21■□□□□ 0.99
TPM1-219ENST00000559397 LINC00116Q8NCU8 138 aa21.21■□□□□ 0.99
TPM1-219ENST00000559397 EIF2S2P20042 333 aaKnown RBP21.2■□□□□ 0.98
TPM1-219ENST00000559397 HDGFL1Q5TGJ6 251 aa21.19■□□□□ 0.98
TPM1-219ENST00000559397 MYH14Q7Z406 1995 aaKnown RBP21.18■□□□□ 0.98
TPM1-219ENST00000559397 STARD3NLO95772 234 aa21.18■□□□□ 0.98
TPM1-219ENST00000559397 ZNF428Q96B54 188 aa21.18■□□□□ 0.98
TPM1-219ENST00000559397 RREB1Q92766 1687 aa21.18■□□□□ 0.98
TPM1-219ENST00000559397 EXOC6Q8TAG9 804 aa21.18■□□□□ 0.98
TPM1-219ENST00000559397 NECTIN2Q92692 538 aa21.18■□□□□ 0.98
TPM1-219ENST00000559397 A1BGP04217 495 aa21.17■□□□□ 0.98
TPM1-219ENST00000559397 CCDC30Q5VVM6 783 aa21.17■□□□□ 0.98
TPM1-219ENST00000559397 C4BP0C0L5 1744 aa21.17■□□□□ 0.98
TPM1-219ENST00000559397 PDIA6Q15084 440 aa21.16■□□□□ 0.98
TPM1-219ENST00000559397 C20orf194Q5TEA3 1177 aa21.16■□□□□ 0.98
TPM1-219ENST00000559397 INTS5Q6P9B9 1019 aaKnown RBP21.16■□□□□ 0.98
TPM1-219ENST00000559397 CHMP4AQ9BY43 222 aa21.16■□□□□ 0.98
TPM1-219ENST00000559397 CNTNAP4Q9C0A0 1308 aa21.16■□□□□ 0.98
TPM1-219ENST00000559397 ERBB4Q15303 1308 aa21.15■□□□□ 0.98
TPM1-219ENST00000559397 CRKLP46109 303 aaKnown RBP21.15■□□□□ 0.98
TPM1-219ENST00000559397 NBPF26B4DH59 902 aa21.15■□□□□ 0.98
TPM1-219ENST00000559397 TCERG1O14776 1098 aaKnown RBP21.15■□□□□ 0.98
TPM1-219ENST00000559397 ALDH1L2Q3SY69 923 aa21.15■□□□□ 0.98
TPM1-219ENST00000559397 RC3H1Q5TC82 1133 aaKnown RBP21.15■□□□□ 0.98
TPM1-219ENST00000559397 NBPF14Q5TI25 921 aa21.15■□□□□ 0.98
TPM1-219ENST00000559397 NBPF10Q6P3W6 841 aaKnown RBP21.15■□□□□ 0.98
TPM1-219ENST00000559397 NBPF15Q8N660 670 aa21.15■□□□□ 0.98
TPM1-219ENST00000559397 SSH1Q8WYL5 1049 aa21.15■□□□□ 0.98
TPM1-219ENST00000559397 CHPF2Q9P2E5 772 aa21.15■□□□□ 0.98
TPM1-219ENST00000559397 ZBTB1Q9Y2K1 713 aa21.15■□□□□ 0.98
TPM1-219ENST00000559397 CRBNQ96SW2 442 aa21.14■□□□□ 0.97
TPM1-219ENST00000559397 CCDC87Q9NVE4 849 aa21.14■□□□□ 0.97
TPM1-219ENST00000559397 NUP188Q5SRE5 1749 aa21.14■□□□□ 0.97
TPM1-219ENST00000559397 CACNA1FO60840 1977 aa21.14■□□□□ 0.97
TPM1-219ENST00000559397 PIP4K2AP48426 406 aaPredicted RBP21.13■□□□□ 0.97
TPM1-219ENST00000559397 PDE3AQ14432 1141 aa21.13■□□□□ 0.97
TPM1-219ENST00000559397 PROSER3Q2NL68 480 aa21.13■□□□□ 0.97
TPM1-219ENST00000559397 LRP10Q7Z4F1 713 aa21.13■□□□□ 0.97
TPM1-219ENST00000559397 DDX21Q9NR30 783 aaKnown RBP eCLIP21.13■□□□□ 0.97
TPM1-219ENST00000559397 DBF4Q9UBU7 674 aaPredicted RBP21.13■□□□□ 0.97
TPM1-219ENST00000559397 ANXA1P04083 346 aa21.12■□□□□ 0.97
TPM1-219ENST00000559397 HMGB2P26583 209 aaKnown RBP21.12■□□□□ 0.97
TPM1-219ENST00000559397 B4GALNT3Q6L9W6 998 aa21.12■□□□□ 0.97
TPM1-219ENST00000559397 MRPL50Q8N5N7 158 aaKnown RBP21.12■□□□□ 0.97
TPM1-219ENST00000559397 STK31Q9BXU1 1019 aa21.12■□□□□ 0.97
TPM1-219ENST00000559397 SLC4A2P04920 1241 aa21.11■□□□□ 0.97
TPM1-219ENST00000559397 CANXP27824 592 aaKnown RBP21.11■□□□□ 0.97
TPM1-219ENST00000559397 BCL2L13Q9BXK5 485 aa21.11■□□□□ 0.97
TPM1-219ENST00000559397 MYL6BP14649 208 aa21.1■□□□□ 0.97
TPM1-219ENST00000559397 AKT1S1Q96B36 256 aa21.1■□□□□ 0.97
TPM1-219ENST00000559397 IL6STP40189 918 aaPredicted RBP21.09■□□□□ 0.97
TPM1-219ENST00000559397 BRPF1P55201 1214 aaPredicted RBP21.09■□□□□ 0.97
TPM1-219ENST00000559397 SMC4Q9NTJ3 1288 aa21.09■□□□□ 0.97
TPM1-219ENST00000559397 UBR3Q6ZT12 1888 aa21.09■□□□□ 0.97
TPM1-219ENST00000559397 EIF5P55010 431 aaKnown RBP21.09■□□□□ 0.97
TPM1-219ENST00000559397 ZNF827Q17R98 1081 aa21.09■□□□□ 0.97
TPM1-219ENST00000559397 HYPKQ9NX55 129 aa21.09■□□□□ 0.97
TPM1-219ENST00000559397 RPS6KA4O75676 772 aa21.08■□□□□ 0.96
TPM1-219ENST00000559397 G2E3Q7L622 706 aa21.08■□□□□ 0.96
TPM1-219ENST00000559397 AMIGO3Q86WK7 504 aa21.08■□□□□ 0.96
TPM1-219ENST00000559397 AK7Q96M32 723 aa21.08■□□□□ 0.96
TPM1-219ENST00000559397 PHAXQ9H814 394 aaKnown RBP21.08■□□□□ 0.96
TPM1-219ENST00000559397 GNPATO15228 680 aa21.07■□□□□ 0.96
TPM1-219ENST00000559397 CCDC136Q96JN2 1154 aa21.07■□□□□ 0.96
TPM1-219ENST00000559397 ANO8Q9HCE9 1232 aaPredicted RBP21.07■□□□□ 0.96
TPM1-219ENST00000559397 TUBGCP6Q96RT7 1819 aa21.06■□□□□ 0.96
TPM1-219ENST00000559397 SMIM5Q71RC9 77 aa21.05■□□□□ 0.96
TPM1-219ENST00000559397 RTCBQ9Y3I0 505 aaKnown RBP21.05■□□□□ 0.96
TPM1-219ENST00000559397 PELP1Q8IZL8 1130 aaKnown RBP21.05■□□□□ 0.96
TPM1-219ENST00000559397 FRAT1Q92837 279 aaPredicted RBP21.05■□□□□ 0.96
TPM1-219ENST00000559397 FLIIQ13045 1269 aa21.04■□□□□ 0.96
TPM1-219ENST00000559397 COPS6Q7L5N1 327 aa21.04■□□□□ 0.96
TPM1-219ENST00000559397 XAGE3Q8WTP9 111 aa21.04■□□□□ 0.96
TPM1-219ENST00000559397 COL15A1P39059 1388 aa21.03■□□□□ 0.96
TPM1-219ENST00000559397 SLC15A2Q16348 729 aa21.03■□□□□ 0.96
TPM1-219ENST00000559397 ZKSCAN2Q63HK3 967 aa21.03■□□□□ 0.96
TPM1-219ENST00000559397 TTLL7Q6ZT98 887 aa21.03■□□□□ 0.96
TPM1-219ENST00000559397 NOB1Q9ULX3 412 aaKnown RBP21.03■□□□□ 0.96
TPM1-219ENST00000559397 ZNF330Q9Y3S2 320 aaPredicted RBP21.03■□□□□ 0.96
TPM1-219ENST00000559397 SSFA2P28290 1259 aa21.02■□□□□ 0.96
TPM1-219ENST00000559397 QSER1Q2KHR3 1735 aa21.02■□□□□ 0.96
TPM1-219ENST00000559397 AIMP1Q12904 312 aaKnown RBP21.02■□□□□ 0.95
TPM1-219ENST00000559397 PANK1Q8TE04 598 aa21.02■□□□□ 0.95
TPM1-219ENST00000559397 STK32BQ9NY57 414 aa21.02■□□□□ 0.95
TPM1-219ENST00000559397 KIF16BQ96L93 1317 aa21.01■□□□□ 0.95
TPM1-219ENST00000559397 C4AP0C0L4 1744 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms