RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 EHBP1L1Q8N3D4 1523 aa11.63□□□□□ -0.55
SPG11-213ENST00000558988 ZNF644Q9H582 1327 aaPredicted RBP11.62□□□□□ -0.55
SPG11-213ENST00000558988 PRICKLE2Q7Z3G6 844 aa11.62□□□□□ -0.55
SPG11-213ENST00000558988 BEGAINQ9BUH8 593 aa11.62□□□□□ -0.55
SPG11-213ENST00000558988 SEMA6BQ9H3T3 888 aa11.62□□□□□ -0.55
SPG11-213ENST00000558988 SUPT6HQ7KZ85 1726 aaKnown RBP11.61□□□□□ -0.55
SPG11-213ENST00000558988 KRTAP4-8A0A0G2JLE6 195 aa11.61□□□□□ -0.55
SPG11-213ENST00000558988 RIPOR1Q6ZS17 1223 aa11.61□□□□□ -0.55
SPG11-213ENST00000558988 TIAM1Q13009 1591 aa11.61□□□□□ -0.55
SPG11-213ENST00000558988 ATP7AQ04656 1500 aa11.6□□□□□ -0.55
SPG11-213ENST00000558988 REREQ9P2R6 1566 aa11.6□□□□□ -0.55
SPG11-213ENST00000558988 C1QTNF9BB2RNN3 333 aa11.6□□□□□ -0.55
SPG11-213ENST00000558988 SHISA8B8ZZ34 492 aa11.6□□□□□ -0.55
SPG11-213ENST00000558988 MX2P20592 715 aa11.6□□□□□ -0.55
SPG11-213ENST00000558988 INTS6LQ5JSJ4 861 aaKnown RBP11.6□□□□□ -0.55
SPG11-213ENST00000558988 PREX1Q8TCU6 1659 aa11.59□□□□□ -0.55
SPG11-213ENST00000558988 PLEKHH2Q8IVE3 1493 aa11.59□□□□□ -0.55
SPG11-213ENST00000558988 GRIN2CQ14957 1233 aa11.59□□□□□ -0.55
SPG11-213ENST00000558988 CSPP1Q1MSJ5 1256 aa11.58□□□□□ -0.56
SPG11-213ENST00000558988 KDF1Q8NAX2 398 aaPredicted RBP11.58□□□□□ -0.56
SPG11-213ENST00000558988 SLC10A4Q96EP9 437 aa11.58□□□□□ -0.56
SPG11-213ENST00000558988 AGLP35573 1532 aa11.58□□□□□ -0.56
SPG11-213ENST00000558988 UHRF1BP1Q6BDS2 1440 aa11.58□□□□□ -0.56
SPG11-213ENST00000558988 C3P01024 1663 aa11.57□□□□□ -0.56
SPG11-213ENST00000558988 ADH1AP07327 375 aa11.57□□□□□ -0.56
SPG11-213ENST00000558988 PTGIRP43119 386 aa11.57□□□□□ -0.56
SPG11-213ENST00000558988 TTLL12Q14166 644 aaPredicted RBP11.57□□□□□ -0.56
SPG11-213ENST00000558988 GGT6Q6P531 493 aa11.57□□□□□ -0.56
SPG11-213ENST00000558988 TRERF1Q96PN7 1200 aa11.57□□□□□ -0.56
SPG11-213ENST00000558988 OXCT2Q9BYC2 517 aaPredicted RBP11.57□□□□□ -0.56
SPG11-213ENST00000558988 RRAGCQ9HB90 399 aa11.57□□□□□ -0.56
SPG11-213ENST00000558988 TMPRSS4Q9NRS4 437 aa11.57□□□□□ -0.56
SPG11-213ENST00000558988 NSFL1CQ9UNZ2 370 aaKnown RBP11.57□□□□□ -0.56
SPG11-213ENST00000558988 KIAA1107Q9UPP5 1409 aa11.57□□□□□ -0.56
SPG11-213ENST00000558988 INO80Q9ULG1 1556 aaPredicted RBP11.57□□□□□ -0.56
SPG11-213ENST00000558988 NCOA2Q15596 1464 aa11.57□□□□□ -0.56
SPG11-213ENST00000558988 CD163Q86VB7 1156 aa11.56□□□□□ -0.56
SPG11-213ENST00000558988 VPS8Q8N3P4 1428 aa11.56□□□□□ -0.56
SPG11-213ENST00000558988 GPKOWQ92917 476 aaPredicted RBP eCLIP11.56□□□□□ -0.56
SPG11-213ENST00000558988 SUV39H2Q9H5I1 410 aa11.56□□□□□ -0.56
SPG11-213ENST00000558988 A2MP01023 1474 aa11.56□□□□□ -0.56
SPG11-213ENST00000558988 ADD1P35611 737 aaKnown RBP11.55□□□□□ -0.56
SPG11-213ENST00000558988 CDV3Q9UKY7 258 aaKnown RBP11.55□□□□□ -0.56
SPG11-213ENST00000558988 DIXDC1Q155Q3 683 aa11.54□□□□□ -0.56
SPG11-213ENST00000558988 C1orf229Q6ZS94 237 aaPredicted RBP11.54□□□□□ -0.56
SPG11-213ENST00000558988 RIC3Q7Z5B4 369 aa11.54□□□□□ -0.56
SPG11-213ENST00000558988 ZNF784Q8NCA9 323 aaPredicted RBP11.54□□□□□ -0.56
SPG11-213ENST00000558988 FBXO41Q8TF61 875 aa11.54□□□□□ -0.56
SPG11-213ENST00000558988 ARHGAP9Q9BRR9 750 aa11.54□□□□□ -0.56
SPG11-213ENST00000558988 CAMSAP2Q08AD1 1489 aa11.54□□□□□ -0.56
SPG11-213ENST00000558988 CNTLNQ9NXG0 1405 aa11.53□□□□□ -0.56
SPG11-213ENST00000558988 CLTCQ00610 1675 aaKnown RBP11.53□□□□□ -0.56
SPG11-213ENST00000558988 GIGYF2Q6Y7W6 1299 aaKnown RBP11.53□□□□□ -0.56
SPG11-213ENST00000558988 MBD5Q9P267 1494 aa11.52□□□□□ -0.56
SPG11-213ENST00000558988 H7C1W4 665 aa11.52□□□□□ -0.57
SPG11-213ENST00000558988 RNF144AP50876 292 aaPredicted RBP11.52□□□□□ -0.57
SPG11-213ENST00000558988 DOC2BQ14184 412 aa11.52□□□□□ -0.57
SPG11-213ENST00000558988 KRTAP19-1Q8IUB9 90 aa11.52□□□□□ -0.57
SPG11-213ENST00000558988 ADGBQ8N7X0 1667 aa11.52□□□□□ -0.57
SPG11-213ENST00000558988 PLXNC1O60486 1568 aa11.51□□□□□ -0.57
SPG11-213ENST00000558988 SETD1BQ9UPS6 1966 aaKnown RBP11.51□□□□□ -0.57
SPG11-213ENST00000558988 CHRNA4P43681 627 aa11.51□□□□□ -0.57
SPG11-213ENST00000558988 KANK4Q5T7N3 995 aaPredicted RBP11.51□□□□□ -0.57
SPG11-213ENST00000558988 ZMYM3Q14202 1370 aa11.51□□□□□ -0.57
SPG11-213ENST00000558988 CCDC141Q6ZP82 1450 aa11.51□□□□□ -0.57
SPG11-213ENST00000558988 LRRC9Q6ZRR7 1453 aa11.51□□□□□ -0.57
SPG11-213ENST00000558988 SCO2A0A1W2PP80 73 aa11.5□□□□□ -0.57
SPG11-213ENST00000558988 KIF3BO15066 747 aa11.5□□□□□ -0.57
SPG11-213ENST00000558988 LILRA1O75019 489 aa11.5□□□□□ -0.57
SPG11-213ENST00000558988 LINC00114Q6XXX2 140 aa11.5□□□□□ -0.57
SPG11-213ENST00000558988 GAS2L1Q99501 681 aaPredicted RBP11.5□□□□□ -0.57
SPG11-213ENST00000558988 MAP2K3P46734 347 aa11.49□□□□□ -0.57
SPG11-213ENST00000558988 PDXDC2PQ6P474 469 aa11.49□□□□□ -0.57
SPG11-213ENST00000558988 DYRK1BQ9Y463 629 aa11.49□□□□□ -0.57
SPG11-213ENST00000558988 MROH2AA6NES4 1674 aa11.49□□□□□ -0.57
SPG11-213ENST00000558988 STRCQ7RTU9 1775 aa11.49□□□□□ -0.57
SPG11-213ENST00000558988 NUTM2BA6NNL0 878 aaPredicted RBP11.48□□□□□ -0.57
SPG11-213ENST00000558988 NUTM2EB1AL46 878 aaPredicted RBP11.48□□□□□ -0.57
SPG11-213ENST00000558988 QPCTQ16769 361 aa11.48□□□□□ -0.57
SPG11-213ENST00000558988 FOXD4L6Q3SYB3 417 aaPredicted RBP11.48□□□□□ -0.57
SPG11-213ENST00000558988 NUTM2DQ5VT03 806 aaPredicted RBP11.48□□□□□ -0.57
SPG11-213ENST00000558988 FOXD4L3Q6VB84 417 aaPredicted RBP11.48□□□□□ -0.57
SPG11-213ENST00000558988 NUTM2AQ8IVF1 878 aaPredicted RBP11.48□□□□□ -0.57
SPG11-213ENST00000558988 TSPY4P0CV99 314 aa11.47□□□□□ -0.57
SPG11-213ENST00000558988 TSPY10P0CW01 314 aa11.47□□□□□ -0.57
SPG11-213ENST00000558988 HOXB4P17483 251 aaPredicted RBP11.47□□□□□ -0.57
SPG11-213ENST00000558988 ZBTB33Q86T24 672 aa11.47□□□□□ -0.57
SPG11-213ENST00000558988 RTEL1-TNFRSF6BF6WH68 1400 aa11.46□□□□□ -0.57
SPG11-213ENST00000558988 DHX29Q7Z478 1369 aaKnown RBP11.46□□□□□ -0.57
SPG11-213ENST00000558988 RAB15P59190 212 aa11.46□□□□□ -0.57
SPG11-213ENST00000558988 EDARADDQ8WWZ3 215 aa11.46□□□□□ -0.57
SPG11-213ENST00000558988 CAMSAP1Q5T5Y3 1602 aa11.46□□□□□ -0.58
SPG11-213ENST00000558988 NPATQ14207 1427 aa11.45□□□□□ -0.58
SPG11-213ENST00000558988 KLRG1Q96E93 195 aa11.45□□□□□ -0.58
SPG11-213ENST00000558988 MYO3AQ8NEV4 1616 aa11.45□□□□□ -0.58
SPG11-213ENST00000558988 PTPRKQ15262 1439 aa11.44□□□□□ -0.58
SPG11-213ENST00000558988 MYOM3Q5VTT5 1437 aa11.44□□□□□ -0.58
SPG11-213ENST00000558988 WASHC2CQ9Y4E1 1318 aa11.44□□□□□ -0.58
SPG11-213ENST00000558988 NCOA1Q15788 1441 aa11.43□□□□□ -0.58
SPG11-213ENST00000558988 ARHGEF5Q12774 1597 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms