RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 PRKRIP1Q9H875 184 aaPredicted RBP20.25■□□□□ 0.83
RPL28-207ENST00000558815 CD2APQ9Y5K6 639 aa20.25■□□□□ 0.83
RPL28-207ENST00000558815 USP42Q9H9J4 1324 aaKnown RBP20.25■□□□□ 0.83
RPL28-207ENST00000558815 COL15A1P39059 1388 aa20.24■□□□□ 0.83
RPL28-207ENST00000558815 WWC3Q9ULE0 1092 aa20.24■□□□□ 0.83
RPL28-207ENST00000558815 ZNF330Q9Y3S2 320 aaPredicted RBP20.24■□□□□ 0.83
RPL28-207ENST00000558815 ZPR1O75312 459 aa20.23■□□□□ 0.83
RPL28-207ENST00000558815 WDR43Q15061 677 aaKnown RBP eCLIP20.23■□□□□ 0.83
RPL28-207ENST00000558815 CCDC146Q8IYE0 955 aa20.23■□□□□ 0.83
RPL28-207ENST00000558815 THUMPD2Q9BTF0 503 aaKnown RBP20.23■□□□□ 0.83
RPL28-207ENST00000558815 FKBP8Q14318 412 aa20.22■□□□□ 0.83
RPL28-207ENST00000558815 USPL1Q5W0Q7 1092 aa20.22■□□□□ 0.83
RPL28-207ENST00000558815 MIS18AQ9NYP9 233 aa20.22■□□□□ 0.83
RPL28-207ENST00000558815 PARP3Q9Y6F1 533 aa20.22■□□□□ 0.83
RPL28-207ENST00000558815 ZNF316A6NFI3 1004 aaPredicted RBP20.21■□□□□ 0.83
RPL28-207ENST00000558815 TAF7Q15545 349 aaPredicted RBP20.21■□□□□ 0.83
RPL28-207ENST00000558815 TEX13AQ9BXU3 409 aaPredicted RBP20.21■□□□□ 0.83
RPL28-207ENST00000558815 CHD4Q14839 1912 aa20.2■□□□□ 0.82
RPL28-207ENST00000558815 KDM3BQ7LBC6 1761 aa20.19■□□□□ 0.82
RPL28-207ENST00000558815 N4BP2Q86UW6 1770 aaPredicted RBP20.19■□□□□ 0.82
RPL28-207ENST00000558815 PRAMEF22A3QJZ6 481 aa20.19■□□□□ 0.82
RPL28-207ENST00000558815 A1BGP04217 495 aa20.19■□□□□ 0.82
RPL28-207ENST00000558815 YBX3P16989 372 aaKnown RBP eCLIP20.19■□□□□ 0.822e-8■■■■□ 19.5
RPL28-207ENST00000558815 NARFQ9UHQ1 456 aa20.19■□□□□ 0.82
RPL28-207ENST00000558815 RRP7AQ9Y3A4 280 aaKnown RBP20.19■□□□□ 0.82
RPL28-207ENST00000558815 KIF13BQ9NQT8 1826 aa20.18■□□□□ 0.82
RPL28-207ENST00000558815 RIPK4P57078 832 aa20.18■□□□□ 0.82
RPL28-207ENST00000558815 NEUROD2Q15784 382 aa20.18■□□□□ 0.82
RPL28-207ENST00000558815 USP16Q9Y5T5 823 aa20.18■□□□□ 0.82
RPL28-207ENST00000558815 SNRPA1P09661 255 aaKnown RBP20.17■□□□□ 0.82
RPL28-207ENST00000558815 PIP4K2AP48426 406 aaPredicted RBP20.17■□□□□ 0.82
RPL28-207ENST00000558815 DDR1Q08345 913 aa20.17■□□□□ 0.82
RPL28-207ENST00000558815 NPM2Q86SE8 214 aaKnown RBP20.17■□□□□ 0.82
RPL28-207ENST00000558815 TMPOP42166 694 aaKnown RBP20.16■□□□□ 0.82
RPL28-207ENST00000558815 EIF5P55010 431 aaKnown RBP20.16■□□□□ 0.82
RPL28-207ENST00000558815 ADAMTS8Q9UP79 889 aa20.16■□□□□ 0.82
RPL28-207ENST00000558815 C10orf71Q711Q0 1435 aa20.16■□□□□ 0.82
RPL28-207ENST00000558815 LAMB4A4D0S4 1761 aa20.16■□□□□ 0.82
RPL28-207ENST00000558815 A0A087WZG4 1122 aa20.15■□□□□ 0.82
RPL28-207ENST00000558815 PNISRQ8TF01 805 aaKnown RBP20.15■□□□□ 0.82
RPL28-207ENST00000558815 TBC1D2BQ9UPU7 963 aa20.15■□□□□ 0.82
RPL28-207ENST00000558815 SCN7AQ01118 1682 aa20.15■□□□□ 0.82
RPL28-207ENST00000558815 KIAA1551Q9HCM1 1747 aa20.15■□□□□ 0.82
RPL28-207ENST00000558815 AFDNP55196 1824 aaKnown RBP20.14■□□□□ 0.81
RPL28-207ENST00000558815 IL6STP40189 918 aaPredicted RBP20.14■□□□□ 0.81
RPL28-207ENST00000558815 BCL2L12Q9HB09 334 aa20.14■□□□□ 0.81
RPL28-207ENST00000558815 PXDNLA1KZ92 1463 aa20.13■□□□□ 0.81
RPL28-207ENST00000558815 BICDL1Q6ZP65 573 aa20.13■□□□□ 0.81
RPL28-207ENST00000558815 RUNDC1Q96C34 613 aa20.13■□□□□ 0.81
RPL28-207ENST00000558815 A0A0G2JLW4 131 aa20.12■□□□□ 0.81
RPL28-207ENST00000558815 POLRMTO00411 1230 aaKnown RBP20.12■□□□□ 0.81
RPL28-207ENST00000558815 GRIN3BO60391 1043 aa20.12■□□□□ 0.81
RPL28-207ENST00000558815 TM4SF1P30408 202 aa20.12■□□□□ 0.81
RPL28-207ENST00000558815 LMOD3Q0VAK6 560 aa20.12■□□□□ 0.81
RPL28-207ENST00000558815 NFIXQ14938 502 aa20.12■□□□□ 0.81
RPL28-207ENST00000558815 TSPYL4Q9UJ04 414 aa20.12■□□□□ 0.81
RPL28-207ENST00000558815 UTRNP46939 3433 aa20.11■□□□□ 0.81
RPL28-207ENST00000558815 BCORQ6W2J9 1755 aa20.11■□□□□ 0.81
RPL28-207ENST00000558815 GOLGB1Q14789 3259 aaKnown RBP20.1■□□□□ 0.81
RPL28-207ENST00000558815 DPEP1P16444 411 aa20.1■□□□□ 0.81
RPL28-207ENST00000558815 TGFB2P61812 414 aa20.1■□□□□ 0.81
RPL28-207ENST00000558815 DZIP3Q86Y13 1208 aaKnown RBP20.1■□□□□ 0.81
RPL28-207ENST00000558815 EIF4A1P60842 406 aaKnown RBP20.09■□□□□ 0.81
RPL28-207ENST00000558815 SERPINB2P05120 415 aa20.08■□□□□ 0.81
RPL28-207ENST00000558815 TBC1D9BQ66K14 1250 aa20.08■□□□□ 0.81
RPL28-207ENST00000558815 BCS1LQ9Y276 419 aa20.08■□□□□ 0.81
RPL28-207ENST00000558815 LAS1LQ9Y4W2 734 aaKnown RBP20.08■□□□□ 0.81
RPL28-207ENST00000558815 NRXN2Q9P2S2 1712 aa20.07■□□□□ 0.8
RPL28-207ENST00000558815 NBPF26B4DH59 902 aa20.07■□□□□ 0.8
RPL28-207ENST00000558815 ANP32CO43423 234 aa20.07■□□□□ 0.8
RPL28-207ENST00000558815 GIGYF1O75420 1035 aaPredicted RBP20.07■□□□□ 0.8
RPL28-207ENST00000558815 CCDC184Q52MB2 194 aa20.07■□□□□ 0.8
RPL28-207ENST00000558815 NBPF10Q6P3W6 841 aaKnown RBP20.07■□□□□ 0.8
RPL28-207ENST00000558815 NGEFQ8N5V2 710 aa20.07■□□□□ 0.8
RPL28-207ENST00000558815 NBPF15Q8N660 670 aa20.07■□□□□ 0.8
RPL28-207ENST00000558815 BRCA1P38398 1863 aaKnown RBP20.07■□□□□ 0.8
RPL28-207ENST00000558815 CAMTA2O94983 1202 aa20.06■□□□□ 0.8
RPL28-207ENST00000558815 CHRNA5P30532 468 aa20.05■□□□□ 0.8
RPL28-207ENST00000558815 TRIM35Q9UPQ4 493 aa20.05■□□□□ 0.8
RPL28-207ENST00000558815 NPHP1O15259 732 aa20.04■□□□□ 0.8
RPL28-207ENST00000558815 APAF1O14727 1248 aa20.03■□□□□ 0.8
RPL28-207ENST00000558815 MYL6BP14649 208 aa20.03■□□□□ 0.8
RPL28-207ENST00000558815 CCDC24Q8N4L8 307 aa20.03■□□□□ 0.8
RPL28-207ENST00000558815 CARMIL3Q8ND23 1372 aa20.03■□□□□ 0.8
RPL28-207ENST00000558815 SENP3-EIF4A1A0A087X0R7 540 aa20.02■□□□□ 0.8
RPL28-207ENST00000558815 EIF2S2P20042 333 aaKnown RBP20.02■□□□□ 0.8
RPL28-207ENST00000558815 ZNF784Q8NCA9 323 aaPredicted RBP20.02■□□□□ 0.8
RPL28-207ENST00000558815 SETDB2Q96T68 719 aa20.02■□□□□ 0.8
RPL28-207ENST00000558815 KCNA3P22001 575 aa20.01■□□□□ 0.79
RPL28-207ENST00000558815 MRS2Q9HD23 443 aa20.01■□□□□ 0.79
RPL28-207ENST00000558815 PIM2Q9P1W9 311 aa20.01■□□□□ 0.79
RPL28-207ENST00000558815 ZNF652Q9Y2D9 606 aa20.01■□□□□ 0.79
RPL28-207ENST00000558815 ANKRD31Q8N7Z5 1873 aa20.01■□□□□ 0.79
RPL28-207ENST00000558815 ARFGEF1Q9Y6D6 1849 aa20■□□□□ 0.79
RPL28-207ENST00000558815 NECTIN2Q92692 538 aa20■□□□□ 0.79
RPL28-207ENST00000558815 BABAM1Q9NWV8 329 aa20■□□□□ 0.79
RPL28-207ENST00000558815 DLEC1Q9Y238 1755 aa19.99■□□□□ 0.79
RPL28-207ENST00000558815 DALRD3Q5D0E6 543 aaKnown RBP19.99■□□□□ 0.79
RPL28-207ENST00000558815 ARHGAP27Q6ZUM4 889 aa19.99■□□□□ 0.79
RPL28-207ENST00000558815 C2CD5Q86YS7 1000 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms