RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 DIEXFQ68CQ4 756 aaKnown RBP20.78■□□□□ 0.92
RABGGTA-206ENST00000558649 INTS5Q6P9B9 1019 aaKnown RBP20.78■□□□□ 0.92
RABGGTA-206ENST00000558649 TSPYL4Q9UJ04 414 aa20.78■□□□□ 0.92
RABGGTA-206ENST00000558649 PRAMEF22A3QJZ6 481 aa20.77■□□□□ 0.92
RABGGTA-206ENST00000558649 STARD3NLO95772 234 aa20.77■□□□□ 0.92
RABGGTA-206ENST00000558649 ZBTB1Q9Y2K1 713 aa20.77■□□□□ 0.92
RABGGTA-206ENST00000558649 COL24A1Q17RW2 1714 aa20.77■□□□□ 0.92
RABGGTA-206ENST00000558649 CANXP27824 592 aaKnown RBP20.76■□□□□ 0.91
RABGGTA-206ENST00000558649 ARHGEF1Q92888 912 aaKnown RBP20.76■□□□□ 0.91
RABGGTA-206ENST00000558649 TEX13AQ9BXU3 409 aaPredicted RBP20.76■□□□□ 0.91
RABGGTA-206ENST00000558649 SNRPA1P09661 255 aaKnown RBP20.75■□□□□ 0.91
RABGGTA-206ENST00000558649 POLD1P28340 1107 aa20.75■□□□□ 0.91
RABGGTA-206ENST00000558649 RFC4P35249 363 aa20.75■□□□□ 0.91
RABGGTA-206ENST00000558649 ZNF330Q9Y3S2 320 aaPredicted RBP20.75■□□□□ 0.91
RABGGTA-206ENST00000558649 ADRA2BP18089 450 aa20.74■□□□□ 0.91
RABGGTA-206ENST00000558649 SOS1Q07889 1333 aaPredicted RBP20.74■□□□□ 0.91
RABGGTA-206ENST00000558649 COL15A1P39059 1388 aa20.73■□□□□ 0.91
RABGGTA-206ENST00000558649 EIF4A1P60842 406 aaKnown RBP20.73■□□□□ 0.91
RABGGTA-206ENST00000558649 SGIP1Q9BQI5 828 aa20.73■□□□□ 0.91
RABGGTA-206ENST00000558649 USP16Q9Y5T5 823 aa20.73■□□□□ 0.91
RABGGTA-206ENST00000558649 A1BGP04217 495 aa20.72■□□□□ 0.91
RABGGTA-206ENST00000558649 PIP4K2AP48426 406 aaPredicted RBP20.72■□□□□ 0.91
RABGGTA-206ENST00000558649 KLHL34Q8N239 644 aa20.72■□□□□ 0.91
RABGGTA-206ENST00000558649 SRP68Q9UHB9 627 aaKnown RBP20.72■□□□□ 0.91
RABGGTA-206ENST00000558649 SALL2Q9Y467 1007 aaPredicted RBP20.72■□□□□ 0.91
RABGGTA-206ENST00000558649 ARXQ96QS3 562 aa20.71■□□□□ 0.91
RABGGTA-206ENST00000558649 SRCAPQ6ZRS2 3230 aa20.71■□□□□ 0.91
RABGGTA-206ENST00000558649 ZPR1O75312 459 aa20.68■□□□□ 0.9
RABGGTA-206ENST00000558649 GIGYF1O75420 1035 aaPredicted RBP20.68■□□□□ 0.9
RABGGTA-206ENST00000558649 CALD1Q05682 793 aaKnown RBP20.68■□□□□ 0.9
RABGGTA-206ENST00000558649 BABAM1Q9NWV8 329 aa20.68■□□□□ 0.9
RABGGTA-206ENST00000558649 USP42Q9H9J4 1324 aaKnown RBP20.68■□□□□ 0.9
RABGGTA-206ENST00000558649 CCER2I3L3R5 266 aa20.67■□□□□ 0.9
RABGGTA-206ENST00000558649 CHL1O00533 1208 aa20.67■□□□□ 0.9
RABGGTA-206ENST00000558649 GYS1P13807 737 aa20.67■□□□□ 0.9
RABGGTA-206ENST00000558649 NPM2Q86SE8 214 aaKnown RBP20.67■□□□□ 0.9
RABGGTA-206ENST00000558649 FHDC1Q9C0D6 1143 aaPredicted RBP20.67■□□□□ 0.9
RABGGTA-206ENST00000558649 SCN7AQ01118 1682 aa20.67■□□□□ 0.9
RABGGTA-206ENST00000558649 KRT24Q2M2I5 525 aa20.66■□□□□ 0.9
RABGGTA-206ENST00000558649 USPL1Q5W0Q7 1092 aa20.66■□□□□ 0.9
RABGGTA-206ENST00000558649 MIER1Q8N108 512 aa20.66■□□□□ 0.9
RABGGTA-206ENST00000558649 CFAP44Q96MT7 982 aa20.66■□□□□ 0.9
RABGGTA-206ENST00000558649 IL6STP40189 918 aaPredicted RBP20.65■□□□□ 0.9
RABGGTA-206ENST00000558649 EIF5P55010 431 aaKnown RBP20.65■□□□□ 0.9
RABGGTA-206ENST00000558649 WWC1Q8IX03 1113 aa20.65■□□□□ 0.9
RABGGTA-206ENST00000558649 MBIPQ9NS73 344 aa20.65■□□□□ 0.9
RABGGTA-206ENST00000558649 IFT57Q9NWB7 429 aa20.65■□□□□ 0.9
RABGGTA-206ENST00000558649 BCORQ6W2J9 1755 aa20.64■□□□□ 0.9
RABGGTA-206ENST00000558649 A0A087WZG4 1122 aa20.64■□□□□ 0.89
RABGGTA-206ENST00000558649 MMP10P09238 476 aa20.64■□□□□ 0.89
RABGGTA-206ENST00000558649 EIF2S2P20042 333 aaKnown RBP20.64■□□□□ 0.89
RABGGTA-206ENST00000558649 GNAI1P63096 354 aa20.64■□□□□ 0.89
RABGGTA-206ENST00000558649 FKBP8Q14318 412 aa20.64■□□□□ 0.89
RABGGTA-206ENST00000558649 NLGN1Q8N2Q7 840 aa20.64■□□□□ 0.89
RABGGTA-206ENST00000558649 NECTIN2Q92692 538 aa20.64■□□□□ 0.89
RABGGTA-206ENST00000558649 TBC1D2BQ9UPU7 963 aa20.64■□□□□ 0.89
RABGGTA-206ENST00000558649 CCDC27Q2M243 656 aa20.63■□□□□ 0.89
RABGGTA-206ENST00000558649 NARFQ9UHQ1 456 aa20.63■□□□□ 0.89
RABGGTA-206ENST00000558649 NBPF26B4DH59 902 aa20.62■□□□□ 0.89
RABGGTA-206ENST00000558649 ZNF853P0CG23 659 aa20.62■□□□□ 0.89
RABGGTA-206ENST00000558649 NBPF10Q6P3W6 841 aaKnown RBP20.62■□□□□ 0.89
RABGGTA-206ENST00000558649 NGEFQ8N5V2 710 aa20.62■□□□□ 0.89
RABGGTA-206ENST00000558649 NBPF15Q8N660 670 aa20.62■□□□□ 0.89
RABGGTA-206ENST00000558649 MYL6BP14649 208 aa20.61■□□□□ 0.89
RABGGTA-206ENST00000558649 DZIP3Q86Y13 1208 aaKnown RBP20.61■□□□□ 0.89
RABGGTA-206ENST00000558649 TSR2Q969E8 191 aaKnown RBP20.6■□□□□ 0.89
RABGGTA-206ENST00000558649 SYT17Q9BSW7 474 aa20.6■□□□□ 0.89
RABGGTA-206ENST00000558649 PARP3Q9Y6F1 533 aa20.6■□□□□ 0.89
RABGGTA-206ENST00000558649 BICDL1Q6ZP65 573 aa20.58■□□□□ 0.89
RABGGTA-206ENST00000558649 BCL2L12Q9HB09 334 aa20.58■□□□□ 0.89
RABGGTA-206ENST00000558649 ELL2O00472 640 aaPredicted RBP20.57■□□□□ 0.88
RABGGTA-206ENST00000558649 NCBP3Q53F19 620 aaKnown RBP20.57■□□□□ 0.88
RABGGTA-206ENST00000558649 DUSP27Q5VZP5 1158 aa20.57■□□□□ 0.88
RABGGTA-206ENST00000558649 NLGN2Q8NFZ4 835 aa20.57■□□□□ 0.88
RABGGTA-206ENST00000558649 AFDNP55196 1824 aaKnown RBP20.56■□□□□ 0.88
RABGGTA-206ENST00000558649 CAMTA2O94983 1202 aa20.56■□□□□ 0.88
RABGGTA-206ENST00000558649 ANXA1P04083 346 aa20.56■□□□□ 0.88
RABGGTA-206ENST00000558649 DDR1Q08345 913 aa20.56■□□□□ 0.88
RABGGTA-206ENST00000558649 HDGFL1Q5TGJ6 251 aa20.56■□□□□ 0.88
RABGGTA-206ENST00000558649 IL16Q14005 1332 aa20.55■□□□□ 0.88
RABGGTA-206ENST00000558649 NFIXQ14938 502 aa20.55■□□□□ 0.88
RABGGTA-206ENST00000558649 PROSER3Q2NL68 480 aa20.55■□□□□ 0.88
RABGGTA-206ENST00000558649 ERBB4Q15303 1308 aa20.54■□□□□ 0.88
RABGGTA-206ENST00000558649 TBC1D9BQ66K14 1250 aa20.54■□□□□ 0.88
RABGGTA-206ENST00000558649 WDR63Q8IWG1 891 aa20.54■□□□□ 0.88
RABGGTA-206ENST00000558649 C8orf58Q8NAV2 365 aa20.54■□□□□ 0.88
RABGGTA-206ENST00000558649 KIF13BQ9NQT8 1826 aa20.53■□□□□ 0.88
RABGGTA-206ENST00000558649 POLRMTO00411 1230 aaKnown RBP20.53■□□□□ 0.88
RABGGTA-206ENST00000558649 HOXB7P09629 217 aa20.53■□□□□ 0.88
RABGGTA-206ENST00000558649 TM4SF1P30408 202 aa20.53■□□□□ 0.88
RABGGTA-206ENST00000558649 KIF6Q6ZMV9 814 aa20.53■□□□□ 0.88
RABGGTA-206ENST00000558649 TTLL7Q6ZT98 887 aa20.53■□□□□ 0.88
RABGGTA-206ENST00000558649 CHPF2Q9P2E5 772 aa20.53■□□□□ 0.88
RABGGTA-206ENST00000558649 FANCIQ9NVI1 1328 aa20.53■□□□□ 0.88
RABGGTA-206ENST00000558649 N4BP2Q86UW6 1770 aaPredicted RBP20.52■□□□□ 0.88
RABGGTA-206ENST00000558649 PDIA6Q15084 440 aa20.52■□□□□ 0.88
RABGGTA-206ENST00000558649 PELP1Q8IZL8 1130 aaKnown RBP20.52■□□□□ 0.88
RABGGTA-206ENST00000558649 ZNF652Q9Y2D9 606 aa20.52■□□□□ 0.88
RABGGTA-206ENST00000558649 CD2APQ9Y5K6 639 aa20.52■□□□□ 0.88
RABGGTA-206ENST00000558649 NUP98P52948 1817 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms