RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 ERVK-9P63128 1117 aa10.18□□□□□ -0.78
ZEB1-210ENST00000557827 ENOX2Q16206 610 aaKnown RBP10.18□□□□□ -0.78
ZEB1-210ENST00000557827 ARMC5Q96C12 935 aa10.18□□□□□ -0.78
ZEB1-210ENST00000557827 GMLQ99445 158 aa10.18□□□□□ -0.78
ZEB1-210ENST00000557827 CHMP4AQ9BY43 222 aa10.18□□□□□ -0.78
ZEB1-210ENST00000557827 SLC6A16Q9GZN6 736 aa10.18□□□□□ -0.78
ZEB1-210ENST00000557827 SH3BP2P78314 561 aa10.17□□□□□ -0.78
ZEB1-210ENST00000557827 LSM11P83369 360 aaKnown RBP eCLIP10.17□□□□□ -0.78
ZEB1-210ENST00000557827 MMRN1Q13201 1228 aa10.17□□□□□ -0.78
ZEB1-210ENST00000557827 CCDC144BQ3MJ40 725 aa10.17□□□□□ -0.78
ZEB1-210ENST00000557827 CC2D2BQ6DHV5 1058 aa10.17□□□□□ -0.78
ZEB1-210ENST00000557827 ALG1LQ6GMV1 187 aa10.17□□□□□ -0.78
ZEB1-210ENST00000557827 ZNF662Q6ZS27 426 aa10.17□□□□□ -0.78
ZEB1-210ENST00000557827 OSBPL3Q9H4L5 887 aa10.17□□□□□ -0.78
ZEB1-210ENST00000557827 IQSEC3Q9UPP2 1182 aaPredicted RBP10.17□□□□□ -0.78
ZEB1-210ENST00000557827 EMILIN1Q9Y6C2 1016 aa10.17□□□□□ -0.78
ZEB1-210ENST00000557827 PNMA6FA0A0J9YX94 578 aa10.16□□□□□ -0.78
ZEB1-210ENST00000557827 ZBTB39O15060 712 aa10.16□□□□□ -0.78
ZEB1-210ENST00000557827 INTS6LQ5JSJ4 861 aaKnown RBP10.16□□□□□ -0.78
ZEB1-210ENST00000557827 STAG2Q8N3U4 1231 aa10.16□□□□□ -0.78
ZEB1-210ENST00000557827 SLC4A9Q96Q91 983 aa10.16□□□□□ -0.78
ZEB1-210ENST00000557827 C2orf49Q9BVC5 232 aaPredicted RBP10.16□□□□□ -0.78
ZEB1-210ENST00000557827 TLDC2A0PJX2 215 aa10.15□□□□□ -0.78
ZEB1-210ENST00000557827 DNAJA1P31689 397 aaKnown RBP10.15□□□□□ -0.78
ZEB1-210ENST00000557827 FOXK2Q01167 660 aa10.15□□□□□ -0.78
ZEB1-210ENST00000557827 TBCELQ5QJ74 424 aa10.15□□□□□ -0.78
ZEB1-210ENST00000557827 ABTB2Q8N961 1025 aa10.15□□□□□ -0.78
ZEB1-210ENST00000557827 ETNK1Q9HBU6 452 aa10.15□□□□□ -0.78
ZEB1-210ENST00000557827 LRFN2Q9ULH4 789 aa10.15□□□□□ -0.78
ZEB1-210ENST00000557827 TMA7Q9Y2S6 64 aaKnown RBP10.15□□□□□ -0.78
ZEB1-210ENST00000557827 GNA15P30679 374 aa10.14□□□□□ -0.79
ZEB1-210ENST00000557827 ATCAYQ86WG3 371 aa10.14□□□□□ -0.79
ZEB1-210ENST00000557827 QTRT2Q9H974 415 aaKnown RBP10.14□□□□□ -0.79
ZEB1-210ENST00000557827 RBL2Q08999 1139 aa10.13□□□□□ -0.79
ZEB1-210ENST00000557827 FAM26DQ5JW98 314 aa10.13□□□□□ -0.79
ZEB1-210ENST00000557827 ANKRD13DQ6ZTN6 518 aa10.13□□□□□ -0.79
ZEB1-210ENST00000557827 SLC9A9Q8IVB4 645 aa10.13□□□□□ -0.79
ZEB1-210ENST00000557827 SCHIP1Q9P0W5 487 aaPredicted RBP10.13□□□□□ -0.79
ZEB1-210ENST00000557827 POLIQ9UNA4 740 aa10.13□□□□□ -0.79
ZEB1-210ENST00000557827 BRD2P25440 801 aaKnown RBP10.12□□□□□ -0.79
ZEB1-210ENST00000557827 VASH1Q7L8A9 365 aaPredicted RBP10.12□□□□□ -0.79
ZEB1-210ENST00000557827 GJD3Q8N144 294 aa10.12□□□□□ -0.79
ZEB1-210ENST00000557827 CTSHP09668 335 aa10.11□□□□□ -0.79
ZEB1-210ENST00000557827 ARID5AQ03989 594 aa10.11□□□□□ -0.79
ZEB1-210ENST00000557827 PMFBP1Q8TBY8 1022 aa10.11□□□□□ -0.79
ZEB1-210ENST00000557827 MYO19Q96H55 970 aa10.11□□□□□ -0.79
ZEB1-210ENST00000557827 CFHR5Q9BXR6 569 aa10.11□□□□□ -0.79
ZEB1-210ENST00000557827 DDX41Q9UJV9 622 aaKnown RBP10.11□□□□□ -0.79
ZEB1-210ENST00000557827 INPP5FQ9Y2H2 1132 aa10.11□□□□□ -0.79
ZEB1-210ENST00000557827 FCF1Q9Y324 198 aaKnown RBP10.11□□□□□ -0.79
ZEB1-210ENST00000557827 AK5Q9Y6K8 562 aa10.11□□□□□ -0.79
ZEB1-210ENST00000557827 A6NJY4 79 aa10.1□□□□□ -0.79
ZEB1-210ENST00000557827 MZF1P28698 734 aaPredicted RBP10.1□□□□□ -0.79
ZEB1-210ENST00000557827 RACK1P63244 317 aaKnown RBP10.1□□□□□ -0.79
ZEB1-210ENST00000557827 ZNF654Q8IZM8 581 aa10.1□□□□□ -0.79
ZEB1-210ENST00000557827 CYLDQ9NQC7 956 aa10.1□□□□□ -0.79
ZEB1-210ENST00000557827 TMPRSS4Q9NRS4 437 aa10.1□□□□□ -0.79
ZEB1-210ENST00000557827 MAP4K5Q9Y4K4 846 aa10.1□□□□□ -0.79
ZEB1-210ENST00000557827 USP5P45974 858 aa10.09□□□□□ -0.79
ZEB1-210ENST00000557827 PSMA6P60900 246 aaKnown RBP10.09□□□□□ -0.79
ZEB1-210ENST00000557827 DNM1Q05193 864 aaKnown RBP10.09□□□□□ -0.79
ZEB1-210ENST00000557827 ZNF394Q53GI3 561 aa10.09□□□□□ -0.79
ZEB1-210ENST00000557827 FBF1Q8TES7 1133 aa10.09□□□□□ -0.79
ZEB1-210ENST00000557827 CRELD1Q96HD1 420 aa10.09□□□□□ -0.79
ZEB1-210ENST00000557827 FRMD6Q96NE9 622 aa10.09□□□□□ -0.79
ZEB1-210ENST00000557827 MTRQ99707 1265 aa10.09□□□□□ -0.79
ZEB1-210ENST00000557827 PIF1Q9H611 641 aa10.09□□□□□ -0.79
ZEB1-210ENST00000557827 ZBTB24O43167 697 aaPredicted RBP10.08□□□□□ -0.8
ZEB1-210ENST00000557827 SMTNP53814 917 aa10.08□□□□□ -0.8
ZEB1-210ENST00000557827 MTFR1Q15390 333 aa10.08□□□□□ -0.8
ZEB1-210ENST00000557827 EDEM1Q92611 657 aa10.08□□□□□ -0.8
ZEB1-210ENST00000557827 CSRNP1Q96S65 589 aa10.08□□□□□ -0.8
ZEB1-210ENST00000557827 SBNO2Q9Y2G9 1366 aa10.08□□□□□ -0.8
ZEB1-210ENST00000557827 GNRH1P01148 92 aa10.07□□□□□ -0.8
ZEB1-210ENST00000557827 SOGA3Q5TF21 947 aa10.07□□□□□ -0.8
ZEB1-210ENST00000557827 PPP1R18Q6NYC8 613 aa10.07□□□□□ -0.8
ZEB1-210ENST00000557827 ZNF516Q92618 1163 aa10.07□□□□□ -0.8
ZEB1-210ENST00000557827 ZSWIM4Q9H7M6 989 aa10.07□□□□□ -0.8
ZEB1-210ENST00000557827 PCDHGB7Q9Y5F8 929 aa10.07□□□□□ -0.8
ZEB1-210ENST00000557827 PDGFAP04085 211 aa10.06□□□□□ -0.8
ZEB1-210ENST00000557827 VARSP26640 1264 aaKnown RBP10.06□□□□□ -0.8
ZEB1-210ENST00000557827 ESCO1Q5FWF5 840 aa10.06□□□□□ -0.8
ZEB1-210ENST00000557827 SDE2Q6IQ49 451 aa10.06□□□□□ -0.8
ZEB1-210ENST00000557827 ETFBKMTQ8IXQ9 262 aa10.06□□□□□ -0.8
ZEB1-210ENST00000557827 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.06□□□□□ -0.8
ZEB1-210ENST00000557827 CHMP3Q9Y3E7 222 aa10.06□□□□□ -0.8
ZEB1-210ENST00000557827 TBX22Q9Y458 520 aa10.06□□□□□ -0.8
ZEB1-210ENST00000557827 S1PR4O95977 384 aa10.05□□□□□ -0.8
ZEB1-210ENST00000557827 EGFLAMQ63HQ2 1017 aa10.05□□□□□ -0.8
ZEB1-210ENST00000557827 CYP2U1Q7Z449 544 aa10.05□□□□□ -0.8
ZEB1-210ENST00000557827 USP48Q86UV5 1035 aa10.05□□□□□ -0.8
ZEB1-210ENST00000557827 VPS37DQ86XT2 251 aa10.05□□□□□ -0.8
ZEB1-210ENST00000557827 NGLY1Q96IV0 654 aa10.05□□□□□ -0.8
ZEB1-210ENST00000557827 SRA1Q9HD15 236 aaKnown RBP10.05□□□□□ -0.8
ZEB1-210ENST00000557827 PTPN12Q05209 780 aaKnown RBP10.04□□□□□ -0.8
ZEB1-210ENST00000557827 ORC1Q13415 861 aa10.04□□□□□ -0.8
ZEB1-210ENST00000557827 C11orf91Q3C1V1 193 aa10.04□□□□□ -0.8
ZEB1-210ENST00000557827 POTEAQ6S8J7 498 aa10.04□□□□□ -0.8
ZEB1-210ENST00000557827 ZNF784Q8NCA9 323 aaPredicted RBP10.04□□□□□ -0.8
ZEB1-210ENST00000557827 RNF166Q96A37 237 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms